AT2G35410 : -
Query Information
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AGICode AT2G35410
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.32
2 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.89 0.3 -0.3
3 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.89 0.32 -0.31
4 AT3G19810 Protein of unknown function (DUF177) 0.88 0.33 -0.34
5 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.88 0.34 -0.3
6 AT3G20230 Ribosomal L18p/L5e family protein 0.88 0.31 -0.3
7 AT3G51820 UbiA prenyltransferase family protein ATG4, CHLG, G4, PIGMENT DEFECTIVE
325		 0.87 0.31 -0.31
8 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.87 0.32 -0.32
9 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.87 0.33 -0.33
10 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.87 0.3 -0.32
11 AT5G54600 Translation protein SH3-like family protein 0.87 0.32 -0.29
12 AT5G46420 16S rRNA processing protein RimM family 0.87 0.29 -0.32
13 AT1G36390 Co-chaperone GrpE family protein 0.86 0.31 -0.31
14 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.86 0.32 -0.32
15 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.86 0.31 -0.31
16 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.85 0.33 -0.34
17 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.85 0.31 -0.32
18 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.85 0.3 -0.31
19 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits
to 146 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.85 0.31 -0.34
20 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.85 0.33 -0.33
21 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.85 0.34 -0.3
22 AT4G36390 Methylthiotransferase 0.84 0.31 -0.32
23 AT5G47110 Chlorophyll A-B binding family protein LIL3:2 0.84 0.31 -0.31
24 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.84 0.32 -0.32
25 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.84 0.33 -0.32
26 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.84 0.29 -0.31
27 AT2G21860 violaxanthin de-epoxidase-related 0.84 0.33 -0.35
28 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.83 0.31 -0.31
29 AT3G60750 Transketolase 0.83 0.32 -0.29
30 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 0.83 0.32 -0.28
31 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.83 0.34 -0.31
32 AT1G10740 alpha/beta-Hydrolases superfamily protein 0.83 0.31 -0.32
33 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.82 0.33 -0.33
34 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.82 0.34 -0.32
35 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.82 0.3 -0.33
36 AT3G63170 Chalcone-flavanone isomerase family protein 0.82 0.33 -0.3
37 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.82 0.33 -0.3
38 AT3G05410 Photosystem II reaction center PsbP family protein 0.82 0.3 -0.32
39 AT2G26550 heme oxygenase 2 heme oxygenase 2 0.82 0.31 -0.32
40 AT4G05090 Inositol monophosphatase family protein 0.82 0.31 -0.33
41 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.73 0.31 -0.31
42 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.72 0.33 -0.3
43 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.31 -0.32
44 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.69 0.3 -0.34
45 AT1G44970 Peroxidase superfamily protein -0.68 0.29 -0.3
46 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.67 0.31 -0.31
47 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.67 0.32 -0.32
48 AT3G49780 phytosulfokine 4 precursor ATPSK3 (FORMER SYMBOL),
phytosulfokine 4 precursor,
phytosulfokine 4 precursor		 -0.66 0.3 -0.31
49 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 -0.66 0.31 -0.32
50 AT4G35060 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 25		 -0.66 0.33 -0.31
51 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.65 0.34 -0.3
52 AT1G28130 Auxin-responsive GH3 family protein GH3.17 -0.65 0.29 -0.31
53 AT3G04060 NAC domain containing protein 46 NAC domain containing protein 46,
NAC domain containing protein 46		 -0.65 0.3 -0.33
54 AT2G39430 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.65 0.32 -0.33
55 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.63 0.33 -0.32
56 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.63 0.32 -0.3
57 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.62 0.33 -0.3
58 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 -0.62 0.3 -0.31
59 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 -0.6 0.32 -0.31
60 AT5G65530 Protein kinase superfamily protein -0.6 0.31 -0.33
61 AT1G47480 alpha/beta-Hydrolases superfamily protein -0.59 0.32 -0.31
62 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.59 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
63 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.79 0.49 -0.51 C0241
64 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.75 0.45 -0.45 C0051
65 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.71 0.45 -0.44