AT2G29760 : ORGANELLE TRANSCRIPT PROCESSING 81
Query Information
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AGICode AT2G29760
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 1 0.32 -0.32
2 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.87 0.3 -0.32
3 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.86 0.31 -0.33
4 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.86 0.32 -0.3
5 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.32 -0.33
6 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.85 0.31 -0.31
7 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.85 0.32 -0.32
8 AT3G13230 RNA-binding KH domain-containing protein 0.85 0.34 -0.3
9 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.84 0.31 -0.31
10 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.84 0.34 -0.3
11 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.84 0.31 -0.31
12 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.84 0.32 -0.32
13 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.84 0.32 -0.3
14 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.84 0.33 -0.3
15 AT1G80750 Ribosomal protein L30/L7 family protein 0.83 0.31 -0.31
16 AT3G23620 Ribosomal RNA processing Brix domain protein 0.83 0.33 -0.31
17 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.83 0.32 -0.33
18 AT1G06380 Ribosomal protein L1p/L10e family 0.83 0.32 -0.35
19 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.83 0.29 -0.3
20 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.83 0.34 -0.31
21 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.83 0.32 -0.32
22 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.31 -0.31
23 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.82 0.33 -0.31
24 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.82 0.3 -0.31
25 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.82 0.32 -0.32
26 AT1G69950 transposable element gene 0.82 0.31 -0.33
27 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.82 0.31 -0.3
28 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.82 0.33 -0.33
29 AT1G50920 Nucleolar GTP-binding protein 0.82 0.33 -0.33
30 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.82 0.32 -0.33
31 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.81 0.31 -0.33
32 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.81 0.32 -0.31
33 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.31 -0.29
34 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.81 0.32 -0.31
35 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.81 0.33 -0.32
36 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.81 0.33 -0.32
37 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.81 0.32 -0.33
38 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.81 0.3 -0.31
39 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.81 0.31 -0.3
40 AT1G76400 Ribophorin I 0.81 0.32 -0.33
41 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.33 -0.29
42 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.81 0.31 -0.33
43 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.8 0.32 -0.34
44 AT1G13160 ARM repeat superfamily protein 0.8 0.33 -0.31
45 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.8 0.29 -0.35
46 AT2G25970 KH domain-containing protein 0.8 0.3 -0.34
47 AT5G49560 Putative methyltransferase family protein 0.8 0.33 -0.31
48 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.8 0.33 -0.32
49 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.8 0.31 -0.31
50 AT1G72550 tRNA synthetase beta subunit family protein 0.8 0.33 -0.29
51 AT1G48570 zinc finger (Ran-binding) family protein 0.79 0.31 -0.33
52 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.33 -0.31
53 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.79 0.36 -0.29
54 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.79 0.32 -0.32
55 AT5G38895 RING/U-box superfamily protein -0.79 0.32 -0.31
56 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.79 0.31 -0.33
57 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.79 0.3 -0.31
58 AT4G23540 ARM repeat superfamily protein 0.79 0.31 -0.31
59 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.79 0.31 -0.32
60 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.31 -0.31
61 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 0.78 0.31 -0.3
62 AT4G31210 DNA topoisomerase, type IA, core 0.78 0.31 -0.3
63 AT1G60080 3'-5'-exoribonuclease family protein 0.78 0.32 -0.33
64 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.78 0.31 -0.31
65 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.32 -0.35
66 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.78 0.33 -0.31
67 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.78 0.31 -0.3
68 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.77 0.31 -0.31
69 AT3G10250 Plant protein 1589 of unknown function -0.77 0.32 -0.32
70 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.77 0.31 -0.31
71 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.77 0.31 -0.31
72 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.77 0.3 -0.32
73 AT1G48650 DEA(D/H)-box RNA helicase family protein 0.77 0.32 -0.29
74 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.77 0.32 -0.3
75 AT5G64420 DNA polymerase V family 0.77 0.31 -0.32
76 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.77 0.32 -0.3
77 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.77 0.32 -0.31
78 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.77 0.32 -0.34
79 AT4G38710 glycine-rich protein 0.77 0.34 -0.29
80 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.77 0.33 -0.32
81 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.77 0.33 -0.34
82 AT3G23940 dehydratase family 0.76 0.3 -0.3
83 AT1G60850 DNA-directed RNA polymerase family protein AAC42, ATRPAC42 0.76 0.3 -0.32
84 AT1G03830 guanylate-binding family protein 0.76 0.32 -0.31
85 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f -0.76 0.33 -0.32
86 AT3G57490 Ribosomal protein S5 family protein 0.76 0.32 -0.33
87 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.33 -0.3
88 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 0.76 0.32 -0.34
89 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.76 0.31 -0.31
90 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.76 0.33 -0.32
91 AT5G41670 6-phosphogluconate dehydrogenase family protein 0.76 0.33 -0.3
92 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.76 0.32 -0.31
93 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.31 -0.3
94 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.76 0.3 -0.29
95 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.75 0.31 -0.33
96 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.3 -0.32
97 AT5G66250 kinectin-related -0.74 0.31 -0.34
98 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.31
99 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.31 -0.3
100 AT3G06780 glycine-rich protein -0.73 0.34 -0.32
101 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.72 0.31 -0.31
102 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.72 0.33 -0.29
103 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.3 -0.32
104 AT1G24440 RING/U-box superfamily protein -0.71 0.33 -0.32
105 AT2G32800 protein kinase family protein AP4.3A -0.7 0.32 -0.3
106 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.7 0.31 -0.31
107 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.7 0.31 -0.32
108 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 -0.69 0.33 -0.32
109 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.69 0.34 -0.31
110 AT3G02340 RING/U-box superfamily protein -0.67 0.32 -0.3
111 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.67 0.29 -0.32
112 AT1G70590 F-box family protein -0.67 0.31 -0.31
113 AT5G02310 proteolysis 6 proteolysis 6 -0.67 0.34 -0.31
114 AT1G75280 NmrA-like negative transcriptional regulator family protein -0.66 0.31 -0.31
115 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.65 0.31 -0.31
116 AT3G11230 Yippee family putative zinc-binding protein -0.65 0.32 -0.32
117 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE -0.65 0.32 -0.3
118 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.65 0.29 -0.32
119 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.64 0.33 -0.31
120 AT1G50740 Transmembrane proteins 14C -0.64 0.3 -0.31