AT2G19930 : -
Query Information
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AGICode AT2G19930
Description RNA-dependent RNA polymerase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G19930 RNA-dependent RNA polymerase family protein 1 0.33 -0.29
2 AT2G40800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.81 0.31 -0.32
3 AT5G60930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.32 -0.33
4 AT3G09570 Lung seven transmembrane receptor family protein -0.79 0.29 -0.31
5 AT3G17860 jasmonate-zim-domain protein 3 JASMONATE-INSENSITIVE 3,
jasmonate-zim-domain protein 3,
TIFY6B		 -0.77 0.3 -0.3
6 AT3G07540 Actin-binding FH2 (formin homology 2) family protein 0.77 0.31 -0.33
7 AT5G25590 Protein of unknown function (DUF630 and DUF632) 0.76 0.34 -0.28
8 AT3G20410 calmodulin-domain protein kinase 9 calmodulin-domain protein kinase 9 -0.76 0.33 -0.32
9 AT5G55200 Co-chaperone GrpE family protein mitochondrial GrpE 1 -0.76 0.3 -0.33
10 AT2G41890 curculin-like (mannose-binding) lectin family protein / PAN
domain-containing protein		 0.76 0.32 -0.3
11 AT3G28930 AIG2-like (avirulence induced gene) family protein AVRRPT2-INDUCED GENE 2 -0.76 0.31 -0.31
12 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2		 -0.76 0.31 -0.33
13 AT1G03780 targeting protein for XKLP2 AtTPX2, targeting protein for
XKLP2		 0.75 0.32 -0.32
14 AT5G05730 anthranilate synthase alpha subunit 1 A-METHYL TRYPTOPHAN RESISTANT 1,
anthranilate synthase alpha
subunit 1, JASMONATE-INDUCED
DEFECTIVE LATERAL ROOT 1,
TRYPTOPHAN BIOSYNTHESIS 5, WEAK
ETHYLENE INSENSITIVE 2		 -0.75 0.32 -0.34
15 AT3G23550 MATE efflux family protein -0.74 0.33 -0.3
16 AT5G05600 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.73 0.34 -0.32
17 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2		 -0.73 0.31 -0.3
18 AT1G72450 jasmonate-zim-domain protein 6 jasmonate-zim-domain protein 6,
TIFY DOMAIN PROTEIN 11B		 -0.73 0.32 -0.31
19 AT1G05010 ethylene-forming enzyme ethylene forming enzyme, EAT1,
ethylene-forming enzyme		 -0.73 0.32 -0.31
20 AT3G49620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DARK INDUCIBLE 11 -0.73 0.31 -0.34
21 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 0.73 0.32 -0.31
22 AT2G15390 fucosyltransferase 4 atfut4, fucosyltransferase 4 -0.73 0.29 -0.31
23 AT5G36880 acetyl-CoA synthetase acetyl-CoA synthetase -0.73 0.3 -0.33
24 AT2G01910 Microtubule associated protein (MAP65/ASE1) family protein ATMAP65-6, MAP65-6 0.72 0.33 -0.32
25 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 -0.72 0.31 -0.31
26 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.29 -0.34
27 AT4G35830 aconitase 1 aconitase 1 -0.72 0.31 -0.3
28 AT5G45280 Pectinacetylesterase family protein -0.72 0.32 -0.32
29 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 -0.72 0.31 -0.32
30 AT1G70700 TIFY domain/Divergent CCT motif family protein JASMONATE-ZIM-DOMAIN PROTEIN 9,
TIFY7		 -0.72 0.3 -0.31
31 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 -0.72 0.33 -0.3
32 AT3G23890 topoisomerase II ATTOPII, topoisomerase II 0.72 0.32 -0.32
33 AT2G45340 Leucine-rich repeat protein kinase family protein 0.72 0.35 -0.31
34 AT1G63100 GRAS family transcription factor 0.71 0.3 -0.31
35 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 -0.71 0.32 -0.33
36 AT1G78560 Sodium Bile acid symporter family -0.71 0.31 -0.33
37 AT1G22410 Class-II DAHP synthetase family protein -0.71 0.31 -0.31
38 AT2G34680 Outer arm dynein light chain 1 protein AUXIN-INDUCED IN ROOT CULTURES 9 0.71 0.29 -0.34
39 AT2G24200 Cytosol aminopeptidase family protein -0.71 0.3 -0.31
40 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 -0.71 0.32 -0.3
41 AT1G67810 sulfur E2 sulfur E2 -0.71 0.32 -0.33
42 AT5G11770 NADH-ubiquinone oxidoreductase 20 kDa subunit,
mitochondrial		 -0.71 0.31 -0.29
43 AT5G11810 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.71 0.33 -0.31
44 AT4G24550 Clathrin adaptor complexes medium subunit family protein -0.7 0.3 -0.28
45 AT2G23620 methyl esterase 1 ARABIDOPSIS THALIANA METHYL
ESTERASE 1, methyl esterase 1		 -0.7 0.33 -0.3
46 AT2G47970 Nuclear pore localisation protein NPL4 -0.7 0.3 -0.32
47 AT1G34355 forkhead-associated (FHA) domain-containing protein PARALLEL SPINDLE 1, PARALLEL
SPINDLE 1		 0.7 0.32 -0.29
48 AT5G54960 pyruvate decarboxylase-2 pyruvate decarboxylase-2 -0.7 0.31 -0.31
49 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.7 0.33 -0.31
50 AT1G22180 Sec14p-like phosphatidylinositol transfer family protein -0.7 0.29 -0.31
51 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).		 -0.7 0.32 -0.32
52 AT2G04400 Aldolase-type TIM barrel family protein -0.7 0.32 -0.3
53 AT5G50960 nucleotide binding protein 35 NUCLEOTIDE BINDING PROTEIN 35,
nucleotide binding protein 35		 -0.7 0.32 -0.32
54 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 0.69 0.3 -0.34
55 AT1G13650 BEST Arabidopsis thaliana protein match is: 18S
pre-ribosomal assembly protein gar2-related
(TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in
255 species: Archae - 22; Bacteria - 222; Metazoa - 684;
Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes -
2392 (source: NCBI BLink).		 0.69 0.32 -0.31
56 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 0.69 0.32 -0.32
57 AT3G16740 F-box and associated interaction domains-containing protein -0.69 0.31 -0.3
58 AT3G51290 Protein of unknown function (DUF630) ;Protein of unknown
function (DUF632)		 0.69 0.29 -0.3
59 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana 0.69 0.31 -0.32
60 AT5G63700 zinc ion binding;DNA binding 0.69 0.33 -0.32
61 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 -0.69 0.32 -0.31
62 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.69 0.32 -0.32
63 AT4G12230 alpha/beta-Hydrolases superfamily protein -0.69 0.3 -0.3
64 AT1G64740 alpha-1 tubulin alpha-1 tubulin -0.69 0.3 -0.33
65 AT3G52560 ubiquitin E2 variant 1D-4 MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN
E2 VARIANT 1D, ubiquitin E2
variant 1D-4		 -0.68 0.31 -0.32
66 AT3G51790 transmembrane protein G1P-related 1 transmembrane protein G1P-related
1, transmembrane protein
G1P-related 1		 -0.68 0.3 -0.32
67 AT2G28620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.3 -0.33
68 AT3G54640 tryptophan synthase alpha chain TRYPTOPHAN-REQUIRING 3, tryptophan
synthase alpha chain		 -0.68 0.33 -0.31
69 AT1G28680 HXXXD-type acyl-transferase family protein -0.68 0.29 -0.33
70 AT5G42650 allene oxide synthase allene oxide synthase, CYTOCHROME
P450 74A, DELAYED DEHISCENCE 2		 -0.68 0.31 -0.3
71 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.34 -0.32
72 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.68 0.3 -0.3
73 AT1G04180 YUCCA 9 YUCCA 9 -0.68 0.31 -0.32
74 AT3G28480 Oxoglutarate/iron-dependent oxygenase -0.68 0.31 -0.32
75 AT1G70620 cyclin-related 0.68 0.32 -0.34
76 AT3G20920 translocation protein-related -0.67 0.32 -0.3
77 AT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger,
PHD-finger and SAP domain		 ATSIZ1, SIZ1 -0.67 0.32 -0.27
78 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 0.67 0.31 -0.33
79 AT5G66930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1649 (InterPro:IPR012445); Has 236
Blast hits to 236 proteins in 105 species: Archae - 0;
Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 -0.67 0.31 -0.33
80 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 -0.67 0.34 -0.32
81 AT2G03280 O-fucosyltransferase family protein 0.67 0.32 -0.33
82 AT4G37120 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 2 -0.67 0.3 -0.3
83 AT4G11010 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 -0.67 0.31 -0.33
84 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.32
85 AT1G08770 prenylated RAB acceptor 1.E prenylated RAB acceptor 1.E -0.67 0.31 -0.31
86 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.67 0.32 -0.31
87 AT4G30530 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 1 -0.67 0.34 -0.31
88 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.67 0.32 -0.3
89 AT4G23710 vacuolar ATP synthase subunit G2 vacuolar ATP synthase subunit G2,
VACUOLAR ATP SYNTHASE SUBUNIT G2,
VHA-G2		 -0.67 0.33 -0.31
90 AT2G30870 glutathione S-transferase PHI 10 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 10, ATGSTF4,
EARLY DEHYDRATION-INDUCED 13,
glutathione S-transferase PHI 10		 -0.66 0.33 -0.31
91 AT1G30890 Integral membrane HRF1 family protein -0.66 0.32 -0.3
92 AT1G76640 Calcium-binding EF-hand family protein -0.66 0.32 -0.31
93 AT2G23270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, sperm cell, root,
stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.31
94 AT3G08650 ZIP metal ion transporter family -0.66 0.3 -0.32
95 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 0.66 0.32 -0.32
96 AT2G47690 NADH-ubiquinone oxidoreductase-related -0.66 0.32 -0.31
97 AT5G43990 SET-domain containing protein lysine methyltransferase
family protein		 SET DOMAIN PROTEIN 18, SUVR2 0.66 0.32 -0.31
98 AT3G12620 Protein phosphatase 2C family protein -0.66 0.34 -0.32
99 AT1G01230 ORMDL family protein -0.66 0.3 -0.3
100 AT3G08640 Protein of unknown function (DUF3411) -0.66 0.32 -0.3
101 AT2G34810 FAD-binding Berberine family protein -0.66 0.31 -0.3
102 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.66 0.33 -0.31
103 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.66 0.31 -0.32
104 AT5G22700 F-box/RNI-like/FBD-like domains-containing protein 0.65 0.32 -0.33
105 AT5G11020 Protein kinase superfamily protein 0.65 0.31 -0.31
106 AT1G36050 Endoplasmic reticulum vesicle transporter protein -0.65 0.3 -0.33
107 AT3G59380 farnesyltransferase A FARNESYLTRANSFERASE A,
farnesyltransferase A,
PFT/PGGT-IALPHA, PLURIPETALA		 -0.65 0.3 -0.3
108 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 -0.65 0.31 -0.31
109 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 -0.65 0.31 -0.32
110 AT2G18750 Calmodulin-binding protein -0.65 0.31 -0.32
111 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 -0.65 0.3 -0.32
112 AT3G12290 Amino acid dehydrogenase family protein -0.65 0.32 -0.31
113 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1		 -0.65 0.32 -0.31
114 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 0.65 0.28 -0.33
115 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.65 0.3 -0.34
116 AT3G13410 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.65 0.31 -0.31
117 AT4G24350 Phosphorylase superfamily protein -0.65 0.32 -0.31
118 AT3G53320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast
hits to 5993 proteins in 551 species: Archae - 8; Bacteria
- 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses
- 112; Other Eukaryotes - 3198 (source: NCBI BLink).		 0.65 0.33 -0.3
119 AT3G47540 Chitinase family protein -0.65 0.34 -0.32
120 AT3G43520 Transmembrane proteins 14C -0.65 0.33 -0.32
121 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB -0.65 0.31 -0.31
122 AT1G01840 unknown protein; Has 23 Blast hits to 23 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.29 -0.31
123 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.65 0.31 -0.32
124 AT1G07990 SIT4 phosphatase-associated family protein 0.64 0.32 -0.32
125 AT2G44830 Protein kinase superfamily protein 0.64 0.32 -0.3
126 AT5G65460 kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin
based chloroplast movement 2,
kinesin CDKA ;1 associated 2		 0.64 0.34 -0.32
127 AT5G62410 structural maintenance of chromosomes 2 ATCAP-E1, ATSMC4, structural
maintenance of chromosomes 2,
TITAN 3		 0.64 0.3 -0.3
128 AT4G24790 AAA-type ATPase family protein 0.63 0.29 -0.32
129 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 0.62 0.3 -0.33
130 AT1G68640 bZIP transcription factor family protein PERIANTHIA 0.62 0.31 -0.31
131 AT2G45100 Cyclin/Brf1-like TBP-binding protein 0.62 0.32 -0.29
132 AT4G25880 pumilio 6 pumilio 6, pumilio 6 0.61 0.32 -0.32
133 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.61 0.32 -0.3
134 AT1G31360 RECQ helicase L2 ARABIDOPSIS THALIANA RECQ 2,
MED34, RECQ helicase L2		 0.61 0.31 -0.32
135 AT1G28110 serine carboxypeptidase-like 45 serine carboxypeptidase-like 45 0.61 0.33 -0.33
136 AT1G05160 cytochrome P450, family 88, subfamily A, polypeptide 3 ATKAO1, cytochrome P450, family
88, subfamily A, polypeptide 3,
ENT-KAURENOIC ACID OXYDASE 1		 0.61 0.33 -0.31
137 AT5G20320 dicer-like 4 DICER-LIKE 4, dicer-like 4 0.61 0.32 -0.31
138 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 0.61 0.32 -0.3
139 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 0.61 0.31 -0.31
140 AT1G70895 CLAVATA3/ESR-RELATED 17 CLAVATA3/ESR-RELATED 17 0.61 0.29 -0.31
141 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 0.61 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0171 MST_2182.9 - - - 0.79 0.46 -0.44
143 C0176 MST_2406.9 - - - 0.7 0.46 -0.49
144 C0119 Indole-3-ylmethyl-glucosinolate - indol-3-ylmethyl glucosinolate indole glucosinolate breakdown (active in intact plant cell),
indole glucosinolate breakdown (insect chewing induced),
glucosinolate biosynthesis from tryptophan 		-0.67 0.45 -0.47 C0119