AT2G46780 : -
Query Information
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AGICode AT2G46780
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.34 -0.32
2 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 0.82 0.29 -0.3
3 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 0.81 0.33 -0.3
4 AT1G75500 Walls Are Thin 1 Walls Are Thin 1 0.81 0.27 -0.31
5 AT5G50375 cyclopropyl isomerase cyclopropyl isomerase 0.8 0.3 -0.32
6 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E		 -0.79 0.32 -0.3
7 AT4G15830 ARM repeat superfamily protein 0.79 0.31 -0.33
8 AT1G50010 tubulin alpha-2 chain tubulin alpha-2 chain 0.79 0.32 -0.31
9 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 -0.78 0.3 -0.31
10 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.78 0.3 -0.3
11 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 0.78 0.33 -0.31
12 AT4G38660 Pathogenesis-related thaumatin superfamily protein 0.77 0.32 -0.3
13 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.77 0.3 -0.31
14 AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.77 0.31 -0.34
15 AT1G80280 alpha/beta-Hydrolases superfamily protein 0.77 0.32 -0.3
16 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.77 0.32 -0.31
17 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.77 0.31 -0.32
18 AT1G74690 IQ-domain 31 IQ-domain 31 0.77 0.31 -0.3
19 AT4G24780 Pectin lyase-like superfamily protein 0.76 0.31 -0.36
20 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.31 -0.32
21 AT2G24180 cytochrome p450 71b6 cytochrome p450 71b6 -0.76 0.33 -0.32
22 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 0.76 0.32 -0.32
23 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.76 0.31 -0.33
24 AT2G29570 proliferating cell nuclear antigen 2 A. THALIANA PROLIFERATING CELL
NUCLEAR ANTIGEN 2, proliferating
cell nuclear antigen 2		 0.76 0.31 -0.3
25 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein 0.76 0.29 -0.3
26 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.76 0.31 -0.34
27 AT4G20430 Subtilase family protein 0.75 0.33 -0.31
28 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 0.75 0.32 -0.31
29 AT2G24440 selenium binding 0.74 0.33 -0.32
30 AT5G13330 related to AP2 6l related to AP2 6l -0.74 0.31 -0.33
31 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 0.74 0.3 -0.33
32 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.74 0.31 -0.33
33 AT5G63180 Pectin lyase-like superfamily protein 0.74 0.31 -0.32
34 AT1G02305 Cysteine proteinases superfamily protein -0.74 0.32 -0.33
35 AT2G35940 BEL1-like homeodomain 1 BEL1-like homeodomain 1, embryo
sac development arrest 29		 -0.74 0.3 -0.33
36 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.74 0.31 -0.32
37 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.74 0.34 -0.33
38 AT3G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.74 0.32 -0.32
39 AT1G76310 CYCLIN B2;4 CYCLIN B2;4 0.74 0.36 -0.31
40 AT3G05900 neurofilament protein-related 0.74 0.33 -0.31
41 AT4G19390 Uncharacterised protein family (UPF0114) -0.73 0.33 -0.3
42 AT5G14780 formate dehydrogenase formate dehydrogenase -0.73 0.29 -0.31
43 AT1G23190 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 3 -0.73 0.33 -0.32
44 AT2G05760 Xanthine/uracil permease family protein 0.73 0.31 -0.32
45 AT5G14590 Isocitrate/isopropylmalate dehydrogenase family protein -0.73 0.31 -0.31
46 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.73 0.34 -0.29
47 AT2G34190 Xanthine/uracil permease family protein 0.73 0.31 -0.33
48 AT1G09160 Protein phosphatase 2C family protein 0.73 0.29 -0.33
49 AT4G03020 transducin family protein / WD-40 repeat family protein -0.73 0.32 -0.31
50 AT4G03110 RNA-binding protein-defense related 1 RNA-binding protein-defense
related 1, RNA-binding
protein-defense related 1		 0.73 0.34 -0.32
51 AT3G48170 aldehyde dehydrogenase 10A9 aldehyde dehydrogenase 10A9 -0.73 0.33 -0.34
52 AT4G29360 O-Glycosyl hydrolases family 17 protein 0.73 0.32 -0.34
53 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.73 0.32 -0.32
54 AT4G38370 Phosphoglycerate mutase family protein 0.72 0.3 -0.3
55 AT1G06830 Glutaredoxin family protein 0.72 0.3 -0.33
56 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.72 0.31 -0.31
57 AT4G16970 Protein kinase superfamily protein 0.72 0.32 -0.33
58 AT4G14330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.32 -0.3
59 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.72 0.3 -0.33
60 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 0.72 0.33 -0.31
61 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 -0.72 0.33 -0.32
62 AT1G17830 Protein of unknown function (DUF789) -0.72 0.3 -0.31
63 AT1G49670 ARP protein (REF) NQR -0.71 0.31 -0.33
64 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.3 -0.31
65 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 -0.71 0.32 -0.34
66 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.71 0.32 -0.32
67 AT1G10030 homolog of yeast ergosterol28 homolog of yeast ergosterol28 0.71 0.32 -0.32
68 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.71 0.34 -0.29
69 AT5G49690 UDP-Glycosyltransferase superfamily protein -0.71 0.34 -0.3
70 AT3G56810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 14 Blast hits to 14 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.71 0.35 -0.32
71 AT5G50000 Protein kinase superfamily protein 0.71 0.32 -0.32
72 AT3G09390 metallothionein 2A ARABIDOPSIS THALIANA
METALLOTHIONEIN-1, ARABIDOPSIS
THALIANA METALLOTHIONEIN-K,
metallothionein 2A		 -0.71 0.33 -0.31
73 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 0.71 0.31 -0.3
74 AT5G16720 Protein of unknown function, DUF593 0.71 0.31 -0.32
75 AT3G56480 myosin heavy chain-related 0.71 0.3 -0.32
76 AT4G30130 Protein of unknown function (DUF630 and DUF632) 0.71 0.31 -0.29
77 AT2G16270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G16630.1); Has 1844
Blast hits to 1256 proteins in 271 species: Archae - 6;
Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91;
Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink).		 0.71 0.31 -0.3
78 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 -0.71 0.32 -0.3
79 AT1G11910 aspartic proteinase A1 aspartic proteinase A1, ATAPA1 -0.71 0.31 -0.33
80 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 0.7 0.31 -0.31
81 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 -0.7 0.31 -0.32
82 AT4G18700 CBL-interacting protein kinase 12 WPL4-LIKE 4, CBL-interacting
protein kinase 12, SNF1-RELATED
PROTEIN KINASE 3.9, WPL4-LIKE 4		 -0.7 0.3 -0.31
83 AT1G77710 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1
(InterPro:IPR005375); Has 244 Blast hits to 244 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi
- 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 -0.7 0.3 -0.31
84 AT3G01970 WRKY DNA-binding protein 45 WRKY DNA-BINDING PROTEIN 45, WRKY
DNA-binding protein 45		 -0.7 0.3 -0.32
85 AT3G51430 Calcium-dependent phosphotriesterase superfamily protein STRICTOSIDINE SYNTHASE-LIKE 5,
YELLOW-LEAF-SPECIFIC GENE 2		 -0.7 0.32 -0.31
86 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 0.7 0.33 -0.3
87 AT5G08330 TCP family transcription factor AtTCP11, TCP domain protein 11 0.7 0.32 -0.33
88 AT4G25000 alpha-amylase-like alpha-amylase-like, ATAMY1 -0.7 0.33 -0.31
89 AT4G24000 cellulose synthase like G2 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G2, cellulose
synthase like G2		 -0.7 0.29 -0.32
90 AT5G22580 Stress responsive A/B Barrel Domain 0.7 0.3 -0.3
91 AT1G80060 Ubiquitin-like superfamily protein 0.69 0.33 -0.31
92 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 0.69 0.31 -0.32
93 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.3 -0.31
94 AT3G56100 meristematic receptor-like kinase IMK3, meristematic receptor-like
kinase		 0.69 0.32 -0.33
95 AT3G26290 cytochrome P450, family 71, subfamily B, polypeptide 26 cytochrome P450, family 71,
subfamily B, polypeptide 26		 -0.69 0.31 -0.3
96 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 0.69 0.31 -0.32
97 AT4G26660 INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.69 0.33 -0.33
98 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 0.69 0.31 -0.31
99 AT5G08270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23200.1); Has 89 Blast hits
to 86 proteins in 45 species: Archae - 0; Bacteria - 0;
Metazoa - 27; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.69 0.33 -0.32
100 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 0.69 0.32 -0.3
101 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 -0.68 0.3 -0.33
102 AT1G34065 S-adenosylmethionine carrier 2 S-adenosylmethionine carrier 2 0.68 0.31 -0.31
103 AT1G76240 Arabidopsis protein of unknown function (DUF241) 0.68 0.32 -0.32
104 AT5G11720 Glycosyl hydrolases family 31 protein -0.68 0.32 -0.29
105 AT3G62960 Thioredoxin superfamily protein 0.68 0.3 -0.3
106 AT3G46880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast
hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.31
107 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 0.68 0.29 -0.31
108 AT5G57330 Galactose mutarotase-like superfamily protein -0.68 0.31 -0.32
109 AT1G01800 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.31 -0.31
110 AT3G61260 Remorin family protein 0.68 0.3 -0.32
111 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease -0.68 0.32 -0.33
112 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 -0.68 0.29 -0.29
113 AT3G47080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.32 -0.33
114 AT4G17460 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT1 0.68 0.33 -0.31
115 AT3G06510 Glycosyl hydrolase superfamily protein SENSITIVE TO FREEZING 2, SENSITIVE
TO FREEZING 2		 -0.67 0.32 -0.32
116 AT5G67480 BTB and TAZ domain protein 4 ATBT4, BTB and TAZ domain protein
4		 -0.67 0.32 -0.31
117 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.31
118 AT5G63030 Thioredoxin superfamily protein glutaredoxin C1 -0.67 0.32 -0.32
119 AT1G79230 mercaptopyruvate sulfurtransferase 1 ATMST1, ARABIDOPSIS THALIANA
RHODANESE HOMOLOGUE 1,
mercaptopyruvate sulfurtransferase
1, SULFURTRANSFERASE 1, STR1		 -0.66 0.33 -0.32
120 AT5G17760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.31 -0.32
121 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 -0.66 0.29 -0.33
122 AT1G18720 Protein of unknown function (DUF962) -0.66 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.68 0.47 -0.45 C0256