AT2G46900 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G46900
Description CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 1 0.3 -0.31
2 AT4G31290 ChaC-like family protein 0.8 0.31 -0.31
3 AT1G68140 Protein of unknown function (DUF1644) 0.77 0.34 -0.33
4 AT3G19910 RING/U-box superfamily protein 0.77 0.33 -0.31
5 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.76 0.32 -0.33
6 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.74 0.29 -0.31
7 AT5G67380 casein kinase alpha 1 ATCKA1, casein kinase alpha 1 0.74 0.31 -0.31
8 AT3G25910 Protein of unknown function (DUF1644) 0.74 0.31 -0.32
9 AT3G24120 Homeodomain-like superfamily protein 0.72 0.3 -0.33
10 AT5G61420 myb domain protein 28 AtMYB28, HIGH ALIPHATIC
GLUCOSINOLATE 1, myb domain
protein 28, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 1		 -0.72 0.33 -0.31
11 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein 0.72 0.33 -0.3
12 AT1G64040 type one serine/threonine protein phosphatase 3 type one serine/threonine protein
phosphatase 3		 0.72 0.32 -0.31
13 AT5G01015 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.31 -0.29
14 AT5G03240 polyubiquitin 3 polyubiquitin 3 0.71 0.3 -0.32
15 AT5G07010 sulfotransferase 2A ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2A,
sulfotransferase 2A		 0.71 0.3 -0.32
16 AT5G58310 methyl esterase 18 ARABIDOPSIS THALIANA METHYL
ESTERASE 18, methyl esterase 18		 -0.71 0.32 -0.3
17 AT5G20520 alpha/beta-Hydrolases superfamily protein WAVY GROWTH 2 0.71 0.31 -0.31
18 AT5G56850 unknown protein; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.71 0.32 -0.32
19 AT5G12110 Glutathione S-transferase, C-terminal-like;Translation
elongation factor EF1B/ribosomal protein S6		 -0.71 0.34 -0.33
20 AT4G09830 Uncharacterised conserved protein UCP009193 0.7 0.32 -0.32
21 AT3G11770 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.7 0.31 -0.31
22 AT2G27420 Cysteine proteinases superfamily protein -0.7 0.31 -0.32
23 AT5G08030 PLC-like phosphodiesterases superfamily protein AtGDPD6, glycerophosphodiester
phosphodiesterase 6		 -0.7 0.31 -0.31
24 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.7 0.34 -0.31
25 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.7 0.31 -0.31
26 AT1G64230 ubiquitin-conjugating enzyme 28 ubiquitin-conjugating enzyme 28 0.69 0.33 -0.33
27 AT1G11700 Protein of unknown function, DUF584 -0.69 0.31 -0.32
28 AT3G56160 Sodium Bile acid symporter family -0.69 0.32 -0.34
29 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.68 0.31 -0.33
30 AT5G40610 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 -0.68 0.33 -0.3
31 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.3 -0.3
32 AT3G60260 ELMO/CED-12 family protein 0.68 0.3 -0.32
33 AT5G10540 Zincin-like metalloproteases family protein 0.67 0.29 -0.32
34 AT5G43460 HR-like lesion-inducing protein-related 0.67 0.31 -0.32
35 AT1G11480 eukaryotic translation initiation factor-related 0.67 0.32 -0.31
36 AT3G52240 unknown protein; Has 220 Blast hits to 193 proteins in 66
species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi -
33; Plants - 66; Viruses - 0; Other Eukaryotes - 53
(source: NCBI BLink).		 0.67 0.3 -0.32
37 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.67 0.31 -0.31
38 AT2G46260 BTB/POZ/Kelch-associated protein 0.67 0.32 -0.32
39 AT3G21950 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.32 -0.32
40 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.67 0.31 -0.3
41 AT3G04560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 16 growth stages; Has
227 Blast hits to 225 proteins in 83 species: Archae - 0;
Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51;
Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).		 0.67 0.3 -0.33
42 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 -0.67 0.31 -0.3
43 AT1G16020 Protein of unknown function (DUF1712) -0.67 0.31 -0.31
44 AT3G19390 Granulin repeat cysteine protease family protein 0.67 0.32 -0.32
45 AT5G13010 RNA helicase family protein embryo defective 3011 0.66 0.32 -0.34
46 AT4G28680 L-tyrosine decarboxylase L-tyrosine decarboxylase,
L-TYROSINE DECARBOXYLASE 1		 -0.66 0.31 -0.31
47 AT2G27200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.33 -0.31
48 AT5G18110 novel cap-binding protein novel cap-binding protein 0.66 0.29 -0.31
49 AT2G42380 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP34, BZIP34 -0.66 0.3 -0.33
50 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 0.66 0.31 -0.33
51 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B 0.66 0.34 -0.31
52 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3		 0.66 0.33 -0.32
53 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.66 0.3 -0.31
54 AT3G60300 RWD domain-containing protein 0.66 0.34 -0.33
55 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.3
56 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 0.65 0.31 -0.31
57 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.65 0.32 -0.32
58 AT5G35330 methyl-CPG-binding domain protein 02 ATMBD2, methyl-CPG-binding domain
protein 02, METHYL-CPG-BINDING
DOMAIN PROTEIN 2		 0.65 0.3 -0.32
59 AT3G53680 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.65 0.31 -0.31
60 AT2G29400 type one protein phosphatase 1 PROTEIN PHOSPHATASE 1, type one
protein phosphatase 1		 0.65 0.31 -0.33
61 AT3G47940 DNAJ heat shock family protein 0.65 0.33 -0.33
62 AT4G12570 ubiquitin protein ligase 5 ubiquitin protein ligase 5 0.64 0.33 -0.31
63 AT4G27000 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45C 0.64 0.33 -0.34
64 AT4G38780 Pre-mRNA-processing-splicing factor -0.64 0.33 -0.33
65 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.64 0.29 -0.32
66 AT5G66700 homeobox 53 ARABIDOPSIS THALIANA HOMEOBOX 53,
HOMEOBOX-8, homeobox 53		 0.64 0.3 -0.3
67 AT2G02160 CCCH-type zinc finger family protein 0.64 0.3 -0.31
68 AT5G53020 Ribonuclease P protein subunit P38-related -0.64 0.34 -0.32
69 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.63 0.31 -0.32
70 AT2G28840 XB3 ortholog 1 in Arabidopsis thaliana XB3 ortholog 1 in Arabidopsis
thaliana		 0.63 0.31 -0.32
71 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 -0.63 0.3 -0.29
72 AT2G19650 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.33
73 AT5G64940 ABC2 homolog 13 ARABIDOPSIS THALIANA ABC2 HOMOLOG
13, ABC2 homolog 13, A. THALIANA
OXIDATIVE STRESS-RELATED ABC1-LIKE
PROTEIN 1, OXIDATIVE
STRESS-RELATED ABC1-LIKE PROTEIN 1		 -0.63 0.3 -0.31
74 AT5G05100 Single-stranded nucleic acid binding R3H protein 0.63 0.31 -0.33
75 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 -0.63 0.33 -0.31
76 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.31
77 AT1G11400 partner of Y14-MAGO partner of Y14-MAGO 0.63 0.32 -0.33
78 AT1G76620 Protein of unknown function, DUF547 -0.63 0.33 -0.33
79 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 0.63 0.32 -0.31
80 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 0.62 0.31 -0.31
81 AT5G66180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.33 -0.3
82 AT1G23180 ARM repeat superfamily protein -0.62 0.32 -0.33
83 AT4G17486 PPPDE putative thiol peptidase family protein 0.62 0.3 -0.34
84 AT4G35580 NAC transcription factor-like 9 NAC transcription factor-like 9 0.62 0.31 -0.32
85 AT1G50180 NB-ARC domain-containing disease resistance protein -0.62 0.32 -0.31
86 AT2G46420 Plant protein 1589 of unknown function -0.62 0.3 -0.31
87 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.62 0.31 -0.32
88 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 0.62 0.29 -0.32
89 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.31
90 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.61 0.3 -0.31
91 AT1G66840 Plant protein of unknown function (DUF827) plastid movement impaired 2, WEAK
CHLOROPLAST MOVEMENT UNDER BLUE
LIGHT 2		 -0.61 0.31 -0.31
92 AT3G12110 actin-11 actin-11 -0.61 0.32 -0.33
93 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.61 0.32 -0.32
94 AT1G31420 Leucine-rich repeat protein kinase family protein FEI 1 -0.61 0.32 -0.31
95 AT2G15920 transposable element gene -0.61 0.32 -0.33
96 AT5G67250 SKP1/ASK1-interacting protein 2 SKP1/ASK1-interacting protein 2,
VIER F-BOX PROTEINE 4		 0.61 0.32 -0.3
97 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 -0.61 0.31 -0.32
98 AT1G64500 Glutaredoxin family protein -0.61 0.33 -0.3
99 AT5G20690 Leucine-rich repeat protein kinase family protein -0.61 0.33 -0.28
100 AT3G12090 tetraspanin6 tetraspanin6 0.61 0.3 -0.31
101 AT3G17090 Protein phosphatase 2C family protein 0.61 0.32 -0.32
102 AT2G41330 Glutaredoxin family protein -0.6 0.34 -0.31
103 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 -0.6 0.31 -0.33
104 AT4G05610 transposable element gene -0.6 0.31 -0.31
105 AT4G18290 potassium channel in Arabidopsis thaliana 2 potassium channel in Arabidopsis
thaliana 2		 -0.6 0.34 -0.31
106 AT2G27990 BEL1-like homeodomain 8 BEL1-like homeodomain 8,
POUND-FOOLISH		 -0.6 0.33 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.7 0.45 -0.45 C0228