AT2G47020 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G47020
Description Peptide chain release factor 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47020 Peptide chain release factor 1 1 0.33 -0.3
2 AT3G43040 transposable element gene -0.76 0.33 -0.31
3 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.72 0.32 -0.32
4 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 -0.71 0.31 -0.31
5 AT1G08170 Histone superfamily protein -0.7 0.33 -0.29
6 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.7 0.31 -0.3
7 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 -0.69 0.31 -0.3
8 AT4G11720 hapless 2 GENERATIVE CELL-SPECIFIC 1,
HAPLESS 2		 -0.69 0.32 -0.34
9 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.68 0.31 -0.34
10 AT5G66240 Transducin/WD40 repeat-like superfamily protein 0.68 0.33 -0.33
11 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.3 -0.3
12 AT1G51550 Kelch repeat-containing F-box family protein -0.67 0.32 -0.29
13 AT1G66830 Leucine-rich repeat protein kinase family protein -0.67 0.31 -0.32
14 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 -0.67 0.33 -0.31
15 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.31
16 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.66 0.32 -0.33
17 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 0.66 0.3 -0.32
18 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.32 -0.29
19 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 -0.66 0.3 -0.32
20 AT1G74190 receptor like protein 15 receptor like protein 15, receptor
like protein 15		 0.65 0.34 -0.32
21 AT1G07530 SCARECROW-like 14 ARABIDOPSIS THALIANA GRAS (GAI,
RGA, SCR) 2, GRAS (GAI, RGA, SCR)
2, SCARECROW-like 14		 -0.65 0.32 -0.3
22 AT5G47100 calcineurin B-like protein 9 ATCBL9, calcineurin B-like protein
9		 0.65 0.28 -0.3
23 AT2G38410 ENTH/VHS/GAT family protein -0.65 0.32 -0.3
24 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 -0.65 0.31 -0.31
25 AT1G08630 threonine aldolase 1 threonine aldolase 1 -0.65 0.32 -0.32
26 AT1G04600 myosin XI A ATXIA, myosin XI A 0.65 0.31 -0.32
27 AT2G11220 transposable element gene -0.65 0.32 -0.32
28 AT3G01400 ARM repeat superfamily protein -0.64 0.31 -0.33
29 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.64 0.3 -0.31
30 AT1G61460 S-locus protein kinase, putative -0.64 0.31 -0.32
31 AT4G17930 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.3
32 AT1G72180 Leucine-rich receptor-like protein kinase family protein -0.63 0.31 -0.34
33 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.63 0.33 -0.3
34 AT2G40160 Plant protein of unknown function (DUF828) TBL30 0.63 0.34 -0.32
35 AT4G12930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal, male
gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G28930.1); Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.33
36 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 -0.63 0.32 -0.31
37 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 -0.63 0.34 -0.31
38 AT1G05610 ADP-glucose pyrophosphorylase small subunit 2 ADP-glucose pyrophosphorylase
small subunit 2		 -0.63 0.32 -0.3
39 AT2G33700 Protein phosphatase 2C family protein -0.63 0.31 -0.31
40 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 0.62 0.3 -0.32
41 AT3G15860 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: pollen tube; CONTAINS InterPro
DOMAIN/s: Plant self-incompatibility S1
(InterPro:IPR010264); BEST Arabidopsis thaliana protein
match is: Plant self-incompatibility protein S1 family
(TAIR:AT5G26090.1); Has 19 Blast hits to 16 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.31
42 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.61 0.32 -0.31
43 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.61 0.31 -0.34
44 AT4G31830 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.3
45 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.61 0.33 -0.31
46 AT1G41870 transposable element gene 0.61 0.31 -0.31
47 AT1G32050 SCAMP family protein 0.6 0.3 -0.31
48 AT5G65910 BSD domain-containing protein -0.6 0.32 -0.31
49 AT2G26960 myb domain protein 81 myb domain protein 81, myb domain
protein 81		 -0.6 0.32 -0.32
50 AT3G01750 Ankyrin repeat family protein -0.6 0.33 -0.33
51 AT3G15130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.33 -0.32
52 AT3G01990 ACT domain repeat 6 ACT domain repeat 6 -0.6 0.33 -0.3
53 AT5G63390 O-fucosyltransferase family protein 0.6 0.31 -0.3
54 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.32 -0.33
55 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14		 0.59 0.33 -0.32
56 AT1G72660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.33 -0.31
57 AT3G54940 Papain family cysteine protease -0.59 0.33 -0.32
58 AT3G28630 Protein of unknown function (DUF569) 0.59 0.32 -0.33
59 AT1G48620 high mobility group A5 high mobility group A5 -0.59 0.28 -0.31
60 AT5G25430 HCO3- transporter family -0.59 0.31 -0.33
61 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL -0.59 0.33 -0.31
62 AT2G11210 transposable element gene -0.58 0.31 -0.33
63 AT5G03210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 7 growth stages; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 AtDIP2, DBP-interacting protein 2 -0.58 0.3 -0.32
64 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 0.58 0.31 -0.3
65 AT3G12890 activator of spomin::LUC2 activator of spomin::LUC2 0.58 0.32 -0.31
66 AT4G24140 alpha/beta-Hydrolases superfamily protein 0.58 0.33 -0.3
67 AT2G39950 unknown protein; Has 978 Blast hits to 254 proteins in 81
species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi -
53; Plants - 41; Viruses - 0; Other Eukaryotes - 767
(source: NCBI BLink).		 -0.58 0.3 -0.33
68 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 0.58 0.34 -0.31
69 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.31 -0.31
70 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.3 -0.33
71 AT2G46260 BTB/POZ/Kelch-associated protein -0.58 0.32 -0.34
72 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.58 0.32 -0.34
73 AT2G19610 RING/U-box superfamily protein 0.58 0.32 -0.34
74 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.33 -0.31
75 AT5G06265 hyaluronan mediated motility receptor-related 0.58 0.29 -0.32
76 AT5G52490 Fibrillarin family protein 0.58 0.34 -0.31
77 AT3G19184 AP2/B3-like transcriptional factor family protein 0.58 0.31 -0.31
78 AT1G49160 Protein kinase superfamily protein WNK7 0.57 0.33 -0.33
79 AT4G19570 Chaperone DnaJ-domain superfamily protein 0.57 0.32 -0.32
80 AT2G07430 transposable element gene -0.57 0.32 -0.33
81 AT5G64190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40390.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.31 -0.31
82 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.33 -0.32
83 AT1G52470 alpha/beta-Hydrolases superfamily protein -0.57 0.3 -0.32
84 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 -0.57 0.31 -0.3
85 AT5G50020 DHHC-type zinc finger family protein -0.57 0.3 -0.32
86 AT4G03660 transposable element gene 0.57 0.3 -0.3
87 AT5G26930 GATA transcription factor 23 GATA transcription factor 23 0.56 0.33 -0.31
88 AT5G61980 ARF-GAP domain 1 ARF-GAP domain 1 -0.56 0.31 -0.32
89 AT5G06920 FASCICLIN-like arabinogalactan protein 21 precursor FASCICLIN-like arabinogalactan
protein 21 precursor		 0.56 0.3 -0.32
90 AT1G02710 glycine-rich protein -0.56 0.3 -0.3
91 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 -0.56 0.33 -0.29
92 AT1G27060 Regulator of chromosome condensation (RCC1) family protein 0.56 0.32 -0.3
93 AT1G14910 ENTH/ANTH/VHS superfamily protein -0.56 0.31 -0.29
94 AT3G63040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.32
95 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.29 -0.32
96 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein 0.56 0.32 -0.33
97 AT1G30740 FAD-binding Berberine family protein 0.55 0.31 -0.32
98 AT2G33640 DHHC-type zinc finger family protein 0.55 0.3 -0.29
99 AT5G22900 cation/H+ exchanger 3 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 3, cation/H+ exchanger 3		 0.55 0.32 -0.32
100 AT3G12300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF667
(InterPro:IPR007714); Has 373 Blast hits to 371 proteins in
116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi
- 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85
(source: NCBI BLink).		 0.55 0.32 -0.31
101 AT5G13830 FtsJ-like methyltransferase family protein 0.55 0.33 -0.32
102 AT1G49960 Xanthine/uracil permease family protein 0.55 0.31 -0.3
103 AT1G43760 DNAse I-like superfamily protein 0.55 0.31 -0.3
104 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.31 -0.29
105 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.55 0.33 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0086 Disinapylspermidine - - - -0.62 0.45 -0.41