AGICode | AT2G46870 |
Description | AP2/B3-like transcriptional factor family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G46870 | AP2/B3-like transcriptional factor family protein | NGATHA1 | 1 | 0.34 | -0.32 | ||
2 | AT3G07670 | Rubisco methyltransferase family protein | 0.88 | 0.33 | -0.32 | |||
3 | AT1G45474 | photosystem I light harvesting complex gene 5 | photosystem I light harvesting complex gene 5 |
0.84 | 0.3 | -0.32 | ||
4 | AT1G31160 | HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 | HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 |
0.83 | 0.33 | -0.32 | ||
5 | AT2G26340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.33 | -0.29 | |||
6 | AT2G27680 | NAD(P)-linked oxidoreductase superfamily protein | 0.82 | 0.34 | -0.33 | |||
7 | AT2G45770 | signal recognition particle receptor protein, chloroplast (FTSY) |
CPFTSY, FERRIC CHELATE REDUCTASE DEFECTIVE 4 |
0.82 | 0.3 | -0.33 | ||
8 | AT5G55710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
translocon at the inner envelope membrane of chloroplasts 20-V, translocon at the inner envelope membrane of chloroplasts 20-V |
0.81 | 0.31 | -0.3 | ||
9 | AT4G27700 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.81 | 0.33 | -0.31 | |||
10 | AT5G50250 | chloroplast RNA-binding protein 31B | chloroplast RNA-binding protein 31B |
0.8 | 0.33 | -0.3 | ||
11 | AT1G56190 | Phosphoglycerate kinase family protein | 0.8 | 0.31 | -0.31 | |||
12 | AT3G17930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
0.8 | 0.31 | -0.3 | |||
13 | AT1G01860 | Ribosomal RNA adenine dimethylase family protein | PALEFACE 1 | 0.79 | 0.3 | -0.31 | ||
14 | AT3G15690 | Single hybrid motif superfamily protein | 0.79 | 0.34 | -0.33 | |||
15 | AT1G74520 | HVA22 homologue A | HVA22 homologue A, HVA22 homologue A |
0.79 | 0.31 | -0.3 | ||
16 | AT2G26900 | Sodium Bile acid symporter family | bile acid:sodium symporter family protein 2 |
0.78 | 0.32 | -0.29 | ||
17 | AT3G49260 | IQ-domain 21 | IQ-domain 21 | 0.78 | 0.31 | -0.31 | ||
18 | AT4G18060 | SH3 domain-containing protein | 0.78 | 0.33 | -0.31 | |||
19 | AT4G31530 | NAD(P)-binding Rossmann-fold superfamily protein | 0.78 | 0.31 | -0.34 | |||
20 | AT3G49900 | Phototropic-responsive NPH3 family protein | 0.78 | 0.31 | -0.33 | |||
21 | AT3G25530 | glyoxylate reductase 1 | ATGHBDH, GHBDH, glyoxylate reductase 1, GLYOXYLATE REDUCTASE 1 |
0.78 | 0.31 | -0.32 | ||
22 | AT1G14240 | GDA1/CD39 nucleoside phosphatase family protein | -0.77 | 0.34 | -0.29 | |||
23 | AT2G04570 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.77 | 0.31 | -0.31 | |||
24 | AT3G15480 | Protein of unknown function (DUF1218) | 0.77 | 0.3 | -0.32 | |||
25 | AT5G51500 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.76 | 0.32 | -0.3 | |||
26 | AT2G25220 | Protein kinase superfamily protein | 0.76 | 0.32 | -0.31 | |||
27 | AT1G76730 | NagB/RpiA/CoA transferase-like superfamily protein | 0.76 | 0.34 | -0.32 | |||
28 | AT5G24290 | Vacuolar iron transporter (VIT) family protein | -0.76 | 0.32 | -0.32 | |||
29 | AT3G16460 | Mannose-binding lectin superfamily protein | jacalin-related lectin 34 | -0.76 | 0.34 | -0.33 | ||
30 | AT4G08240 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.75 | 0.3 | -0.31 | |||
31 | AT1G70070 | DEAD/DEAH box helicase, putative | EMBRYO DEFECTIVE 25, INCREASED SIZE EXCLUSION LIMIT 2, PIGMENT DEFECTIVE 317 |
0.75 | 0.34 | -0.31 | ||
32 | AT4G33580 | beta carbonic anhydrase 5 | A. THALIANA BETA CARBONIC ANHYDRASE 5, beta carbonic anhydrase 5 |
0.75 | 0.32 | -0.31 | ||
33 | AT5G06060 | NAD(P)-binding Rossmann-fold superfamily protein | 0.75 | 0.33 | -0.31 | |||
34 | AT1G19740 | ATP-dependent protease La (LON) domain protein | 0.75 | 0.29 | -0.32 | |||
35 | AT3G54930 | Protein phosphatase 2A regulatory B subunit family protein | 0.75 | 0.32 | -0.34 | |||
36 | AT3G21420 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
LATERAL BRANCHING OXIDOREDUCTASE 1 | -0.75 | 0.33 | -0.31 | ||
37 | AT5G22830 | magnesium (Mg) transporter 10 | magnesium (Mg) transporter 10, GMN10, magnesium (Mg) transporter 10, MAGNESIUM TRANSPORTER 10, MRS2-11 |
0.75 | 0.32 | -0.3 | ||
38 | AT2G01110 | Sec-independent periplasmic protein translocase | ALBINO AND PALE GREEN 2, PGA2, TWIN-ARGININE TRANSLOCATION C, unfertilized embryo sac 3 |
0.75 | 0.31 | -0.29 | ||
39 | AT2G34500 | cytochrome P450, family 710, subfamily A, polypeptide 1 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
-0.75 | 0.3 | -0.3 | ||
40 | AT5G63930 | Leucine-rich repeat protein kinase family protein | -0.73 | 0.33 | -0.33 | |||
41 | AT2G39110 | Protein kinase superfamily protein | -0.72 | 0.33 | -0.3 | |||
42 | AT4G12080 | AT-hook motif nuclear-localized protein 1 | AT-hook motif nuclear-localized protein 1, ATAHL1 |
-0.71 | 0.31 | -0.3 | ||
43 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | -0.71 | 0.32 | -0.33 | ||
44 | AT1G15210 | pleiotropic drug resistance 7 | ATP-binding cassette G35, PLEIOTROPIC DRUG RESISTANCE 7, pleiotropic drug resistance 7 |
-0.71 | 0.31 | -0.3 | ||
45 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | -0.71 | 0.31 | -0.33 | |||
46 | AT2G03240 | EXS (ERD1/XPR1/SYG1) family protein | -0.71 | 0.32 | -0.32 | |||
47 | AT1G61820 | beta glucosidase 46 | beta glucosidase 46 | -0.7 | 0.31 | -0.32 | ||
48 | AT1G22440 | Zinc-binding alcohol dehydrogenase family protein | -0.7 | 0.32 | -0.33 | |||
49 | AT5G44350 | ethylene-responsive nuclear protein -related | -0.7 | 0.32 | -0.3 | |||
50 | AT3G49810 | ARM repeat superfamily protein | -0.69 | 0.32 | -0.31 | |||
51 | AT4G01480 | pyrophosphorylase 5 | pyrophosphorylase 5, pyrophosphorylase 5 |
-0.69 | 0.31 | -0.32 | ||
52 | AT5G48940 | Leucine-rich repeat transmembrane protein kinase family protein |
-0.68 | 0.3 | -0.31 | |||
53 | AT5G19520 | mechanosensitive channel of small conductance-like 9 | ATMSL9, mechanosensitive channel of small conductance-like 9 |
-0.68 | 0.3 | -0.33 | ||
54 | AT2G30040 | mitogen-activated protein kinase kinase kinase 14 | mitogen-activated protein kinase kinase kinase 14 |
-0.68 | 0.31 | -0.31 | ||
55 | AT4G13235 | embryo sac development arrest 21 | embryo sac development arrest 21 | -0.67 | 0.3 | -0.31 | ||
56 | AT5G52050 | MATE efflux family protein | -0.67 | 0.34 | -0.32 | |||
57 | AT3G19200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.33 | -0.33 | |||
58 | AT5G59560 | sensitivity to red light reduced protein (SRR1) | SENSITIVITY TO RED LIGHT REDUCED 1 | -0.67 | 0.32 | -0.31 | ||
59 | AT1G23850 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.32 | -0.3 | |||
60 | AT3G15950 | DNA topoisomerase-related | NAI2 | -0.66 | 0.33 | -0.34 | ||
61 | AT1G66160 | CYS, MET, PRO, and GLY protein 1 | ATCMPG1, CYS, MET, PRO, and GLY protein 1 |
-0.65 | 0.31 | -0.3 | ||
62 | AT2G27080 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.65 | 0.33 | -0.32 | |||
63 | AT2G41640 | Glycosyltransferase family 61 protein | -0.64 | 0.31 | -0.29 | |||
64 | AT4G28890 | RING/U-box superfamily protein | -0.64 | 0.29 | -0.32 | |||
65 | AT2G22770 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
NAI1 | -0.63 | 0.3 | -0.31 | ||
66 | AT4G20210 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.63 | 0.31 | -0.32 | |||
67 | AT2G22680 | Zinc finger (C3HC4-type RING finger) family protein | WAV3 homolog 1 | -0.62 | 0.3 | -0.3 | ||
68 | AT2G01880 | purple acid phosphatase 7 | PURPLE ACID PHOSPHATASE 7, purple acid phosphatase 7 |
-0.62 | 0.33 | -0.31 | ||
69 | AT2G34600 | jasmonate-zim-domain protein 7 | jasmonate-zim-domain protein 7, TIFY5B |
-0.62 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
70 | C0166 | MST_1705.1 | - | - | - | 0.77 | 0.43 | -0.43 | ||
71 | C0188 | Nicotine | (-)-Nicotine | Nicotine | - | -0.72 | 0.48 | -0.46 | ||
72 | C0008 | γ-Aminobutyric acid | - | 4-Aminobutyrate | glutamate degradation IV, 4-aminobutyrate degradation IV, putrescine degradation IV |
-0.66 | 0.33 | -0.31 |