AT2G25930 : EARLY FLOWERING 3
Query Information
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AGICode AT2G25930
Description hydroxyproline-rich glycoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 1 0.33 -0.29
2 AT4G28770 Tetraspanin family protein -0.72 0.31 -0.3
3 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.67 0.33 -0.3
4 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 0.67 0.33 -0.31
5 AT4G36750 Quinone reductase family protein -0.66 0.32 -0.32
6 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 -0.66 0.31 -0.32
7 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.66 0.29 -0.32
8 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.65 0.32 -0.32
9 AT5G59210 myosin heavy chain-related -0.65 0.33 -0.32
10 AT4G15920 Nodulin MtN3 family protein AtSWEET17, SWEET17 -0.65 0.3 -0.3
11 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.31
12 AT5G51740 Peptidase family M48 family protein -0.63 0.32 -0.31
13 AT3G01770 bromodomain and extraterminal domain protein 10 bromodomain and extraterminal
domain protein 10, bromodomain and
extraterminal domain protein 10		 0.63 0.29 -0.31
14 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.63 0.31 -0.32
15 AT1G13400 C2H2 and C2HC zinc fingers superfamily protein JAGGED-LIKE, NUBBIN 0.63 0.33 -0.34
16 AT1G60160 Potassium transporter family protein 0.63 0.3 -0.33
17 AT3G22240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits
to 177 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.3
18 AT4G21430 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 B160 0.62 0.31 -0.32
19 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.62 0.31 -0.31
20 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 0.62 0.31 -0.33
21 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 0.61 0.33 -0.33
22 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.61 0.34 -0.32
23 AT3G50180 Plant protein of unknown function (DUF247) -0.61 0.31 -0.31
24 AT4G05050 ubiquitin 11 ubiquitin 11 -0.61 0.31 -0.32
25 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.6 0.33 -0.31
26 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 0.6 0.33 -0.31
27 AT1G74630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.33 -0.31
28 AT1G66100 Plant thionin -0.6 0.32 -0.33
29 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 0.6 0.32 -0.33
30 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 0.59 0.34 -0.31
31 AT1G52770 Phototropic-responsive NPH3 family protein 0.59 0.32 -0.3
32 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 0.59 0.31 -0.32
33 AT5G20500 Glutaredoxin family protein -0.59 0.32 -0.32
34 AT1G80970 XH domain-containing protein -0.59 0.32 -0.29
35 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 0.58 0.33 -0.32
36 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.3 -0.3
37 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 -0.58 0.32 -0.31
38 AT4G01650 Polyketide cyclase / dehydrase and lipid transport protein -0.58 0.29 -0.33
39 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 -0.58 0.34 -0.32
40 AT1G31290 ARGONAUTE 3 ARGONAUTE 3 0.58 0.33 -0.32
41 AT1G71830 somatic embryogenesis receptor-like kinase 1 SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 1, somatic
embryogenesis receptor-like kinase
1		 0.58 0.32 -0.31
42 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 0.58 0.31 -0.32
43 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 0.58 0.33 -0.32
44 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 -0.58 0.32 -0.31
45 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.57 0.31 -0.3
46 AT3G22890 ATP sulfurylase 1 ATP sulfurylase 1 -0.57 0.31 -0.31
47 AT2G07720 transposable element gene -0.57 0.3 -0.33
48 AT1G63350 Disease resistance protein (CC-NBS-LRR class) family -0.57 0.3 -0.31
49 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.57 0.33 -0.3
50 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein -0.57 0.31 -0.3
51 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.57 0.32 -0.28
52 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase 0.56 0.3 -0.33
53 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.56 0.32 -0.3
54 AT5G37710 alpha/beta-Hydrolases superfamily protein 0.56 0.31 -0.31
55 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.56 0.31 -0.34
56 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.56 0.32 -0.31
57 AT3G08890 Protein of unknown function, DUF538 -0.56 0.32 -0.3
58 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.56 0.32 -0.31
59 AT2G22450 riboflavin biosynthesis protein, putative 0.56 0.29 -0.31
60 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.55 0.32 -0.31
61 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.32 -0.34
62 AT5G25270 Ubiquitin-like superfamily protein 0.55 0.33 -0.3
63 AT1G27130 glutathione S-transferase tau 13 glutathione S-transferase tau 13,
GLUTATHIONE S-TRANSFERASE 12,
glutathione S-transferase tau 13		 -0.55 0.33 -0.3
64 AT2G04460 transposable element gene -0.55 0.35 -0.32
65 AT5G23860 tubulin beta 8 tubulin beta 8 -0.55 0.3 -0.32
66 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.29 -0.32
67 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein -0.55 0.33 -0.31
68 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.55 0.32 -0.32
69 AT1G13900 Purple acid phosphatases superfamily protein -0.55 0.31 -0.32
70 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.55 0.32 -0.33
71 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.55 0.32 -0.3
72 AT1G32840 transposable element gene -0.55 0.32 -0.32
73 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 -0.55 0.32 -0.31
74 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 0.54 0.32 -0.32
75 AT5G26660 myb domain protein 86 myb domain protein 86, myb domain
protein 86		 -0.54 0.32 -0.31
76 AT4G02450 HSP20-like chaperones superfamily protein -0.54 0.34 -0.32
77 AT1G72890 Disease resistance protein (TIR-NBS class) -0.54 0.31 -0.3
78 AT5G02040 prenylated RAB acceptor 1.A1 prenylated RAB acceptor 1.A1 -0.54 0.33 -0.31
79 AT5G51980 Transducin/WD40 repeat-like superfamily protein -0.53 0.32 -0.32
80 AT3G30800 transposable element gene 0.53 0.29 -0.33
81 AT3G50140 Plant protein of unknown function (DUF247) -0.53 0.3 -0.28
82 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.53 0.3 -0.3
83 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.53 0.31 -0.33
84 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 -0.53 0.33 -0.29
85 AT5G32460 Transcriptional factor B3 family protein 0.53 0.3 -0.32
86 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.53 0.32 -0.3
87 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.52 0.3 -0.33
88 AT5G42280 Cysteine/Histidine-rich C1 domain family protein -0.52 0.3 -0.33
89 AT1G64100 pentatricopeptide (PPR) repeat-containing protein 0.52 0.3 -0.29
90 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.52 0.32 -0.32
91 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 0.52 0.31 -0.33
92 AT1G15100 RING-H2 finger A2A RING-H2 finger A2A -0.52 0.28 -0.33
93 AT5G07910 Leucine-rich repeat (LRR) family protein -0.52 0.31 -0.3
94 AT3G01620 beta-1,4-N-acetylglucosaminyltransferase family protein -0.52 0.3 -0.32
95 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.3 -0.29
96 AT4G05320 polyubiquitin 10 polyubiquitin 10 -0.52 0.33 -0.33
97 AT5G26720 unknown protein; Has 15 Blast hits to 15 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.3 -0.31
98 AT4G02850 phenazine biosynthesis PhzC/PhzF family protein -0.52 0.31 -0.32
99 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.52 0.31 -0.31
100 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 -0.51 0.33 -0.33
101 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein 0.51 0.33 -0.33
102 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 -0.51 0.33 -0.3
103 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.28 -0.34
104 AT4G29050 Concanavalin A-like lectin protein kinase family protein -0.51 0.32 -0.33
105 AT5G05890 UDP-Glycosyltransferase superfamily protein -0.51 0.32 -0.31
106 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.51 0.32 -0.32
107 AT1G35820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30520.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.51 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0116 Hydroxylamine - Hydroxylamine - -0.53 0.46 -0.44 C0116