AT2G25970 : -
Query Information
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AGICode AT2G25970
Description KH domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G25970 KH domain-containing protein 1 0.31 -0.31
2 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.87 0.32 -0.31
3 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.86 0.31 -0.31
4 AT1G28060 Pre-mRNA-splicing factor 3 0.85 0.31 -0.32
5 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.84 0.31 -0.28
6 AT1G80750 Ribosomal protein L30/L7 family protein 0.84 0.3 -0.31
7 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.84 0.33 -0.31
8 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.84 0.3 -0.32
9 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.83 0.33 -0.33
10 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.82 0.32 -0.32
11 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.82 0.31 -0.31
12 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.82 0.33 -0.33
13 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.82 0.32 -0.32
14 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.81 0.31 -0.31
15 AT5G05210 Surfeit locus protein 6 0.81 0.32 -0.3
16 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.81 0.3 -0.32
17 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.28 -0.32
18 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.8 0.33 -0.32
19 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.3 -0.32
20 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.8 0.3 -0.31
21 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.8 0.31 -0.32
22 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.8 0.3 -0.3
23 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.8 0.32 -0.31
24 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.79 0.32 -0.32
25 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.79 0.33 -0.3
26 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.34 -0.32
27 AT2G21790 ribonucleotide reductase 1 RIBONUCLEOTIDE REDUCTASE LARGE
SUBUNIT 1, CRINKLY LEAVES 8,
RIBONUCLEOTIDE REDUCTASE 1,
ribonucleotide reductase 1		 0.79 0.31 -0.31
28 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.78 0.31 -0.32
29 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.78 0.36 -0.32
30 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.78 0.3 -0.31
31 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.31 -0.31
32 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.78 0.35 -0.3
33 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.33 -0.33
34 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.78 0.32 -0.31
35 AT3G25940 TFIIB zinc-binding protein 0.77 0.33 -0.31
36 AT5G12200 pyrimidine 2 pyrimidine 2 -0.77 0.32 -0.31
37 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.77 0.32 -0.3
38 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.77 0.31 -0.3
39 AT5G59980 Polymerase/histidinol phosphatase-like 0.77 0.31 -0.32
40 AT1G54380 spliceosome protein-related 0.77 0.31 -0.31
41 AT5G46920 Intron maturase, type II family protein 0.77 0.32 -0.33
42 AT1G22730 MA3 domain-containing protein 0.77 0.32 -0.34
43 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.77 0.31 -0.32
44 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.77 0.31 -0.31
45 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.3 -0.32
46 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.32 -0.31
47 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.76 0.31 -0.31
48 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.76 0.31 -0.34
49 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.76 0.31 -0.33
50 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase 0.76 0.32 -0.27
51 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.76 0.33 -0.32
52 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.75 0.31 -0.3
53 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.75 0.32 -0.3
54 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.75 0.32 -0.31
55 AT2G40650 PRP38 family protein 0.75 0.32 -0.31
56 AT5G17930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.75 0.33 -0.3
57 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.75 0.29 -0.3
58 AT4G38710 glycine-rich protein 0.75 0.3 -0.32
59 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.75 0.33 -0.31
60 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.31
61 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.31 -0.31
62 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.74 0.34 -0.31
63 AT1G48650 DEA(D/H)-box RNA helicase family protein 0.74 0.33 -0.31
64 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.74 0.29 -0.31
65 AT2G34970 Trimeric LpxA-like enzyme 0.74 0.33 -0.3
66 AT5G51120 polyadenylate-binding protein 1 POLYADENYLATE-BINDING PROTEIN 1,
polyadenylate-binding protein 1		 0.74 0.32 -0.32
67 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 0.74 0.33 -0.3
68 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 0.74 0.32 -0.3
69 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.74 0.31 -0.33
70 AT1G03830 guanylate-binding family protein 0.73 0.3 -0.31
71 AT3G26370 O-fucosyltransferase family protein 0.73 0.31 -0.3
72 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.73 0.31 -0.32
73 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.73 0.32 -0.34
74 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.73 0.31 -0.29
75 AT2G02880 mucin-related 0.73 0.32 -0.31
76 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.29 -0.33
77 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.32 -0.31
78 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.72 0.29 -0.32
79 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 0.72 0.32 -0.3
80 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.72 0.32 -0.32
81 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.71 0.31 -0.32
82 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.71 0.31 -0.33
83 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.31 -0.31
84 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.34 -0.31
85 AT5G27350 Major facilitator superfamily protein SFP1 -0.68 0.33 -0.32
86 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.68 0.33 -0.31
87 AT5G13760 Plasma-membrane choline transporter family protein -0.68 0.31 -0.31
88 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.66 0.3 -0.31
89 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.66 0.32 -0.32
90 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 -0.65 0.31 -0.33
91 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.33 -0.35
92 AT1G16730 unknown protein 6 unknown protein 6 -0.64 0.3 -0.3
93 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.64 0.29 -0.33
94 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 -0.63 0.32 -0.31
95 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.63 0.33 -0.32
96 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.63 0.32 -0.32
97 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 -0.62 0.31 -0.31
98 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.62 0.31 -0.31
99 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.61 0.32 -0.31
100 AT3G59660 C2 domain-containing protein / GRAM domain-containing
protein		 -0.61 0.31 -0.32
101 AT4G20820 FAD-binding Berberine family protein -0.61 0.3 -0.29
102 AT5G19150 pfkB-like carbohydrate kinase family protein -0.6 0.34 -0.32
103 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.6 0.33 -0.32
104 AT1G60260 beta glucosidase 5 beta glucosidase 5 -0.6 0.32 -0.33
105 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.59 0.32 -0.35
106 AT4G04320 malonyl-CoA decarboxylase family protein -0.59 0.31 -0.3
107 AT1G37000 Beta-galactosidase related protein -0.59 0.32 -0.33
108 AT4G19045 Mob1/phocein family protein -0.59 0.32 -0.3
109 AT1G77660 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.58 0.31 -0.3
110 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.58 0.32 -0.29
111 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 -0.58 0.3 -0.33
112 AT4G31330 Protein of unknown function, DUF599 -0.58 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.65 0.46 -0.47 C0033