AT2G25940 : alpha-vacuolar processing enzyme
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G25940
Description alpha-vacuolar processing enzyme
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G25940 alpha-vacuolar processing enzyme alpha-vacuolar processing enzyme,
ALPHAVPE		 1 0.33 -0.32
2 AT1G66940 protein kinase-related -0.82 0.31 -0.31
3 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 0.82 0.33 -0.33
4 AT2G18360 alpha/beta-Hydrolases superfamily protein 0.81 0.29 -0.32
5 AT5G63180 Pectin lyase-like superfamily protein -0.79 0.3 -0.32
6 AT5G19250 Glycoprotein membrane precursor GPI-anchored -0.77 0.33 -0.33
7 AT3G20250 pumilio 5 pumilio 5, pumilio 5 0.76 0.32 -0.34
8 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 0.76 0.31 -0.35
9 AT3G10520 haemoglobin 2 haemoglobin 2, ARATH GLB2,
ARABIDOPSIS HEMOGLOBIN 2,
HEMOGLOBIN 2, haemoglobin 2,
NON-SYMBIOTIC HAEMOGLOBIN 2		 -0.76 0.33 -0.3
10 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.75 0.31 -0.33
11 AT2G41220 glutamate synthase 2 glutamate synthase 2 0.75 0.33 -0.3
12 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 0.75 0.32 -0.29
13 AT5G08330 TCP family transcription factor AtTCP11, TCP domain protein 11 -0.75 0.32 -0.32
14 AT2G30010 TRICHOME BIREFRINGENCE-LIKE 45 TRICHOME BIREFRINGENCE-LIKE 45 -0.74 0.32 -0.31
15 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein -0.74 0.29 -0.32
16 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.74 0.33 -0.31
17 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 0.74 0.31 -0.32
18 AT2G26580 plant-specific transcription factor YABBY family protein YABBY5 -0.74 0.35 -0.32
19 AT2G30890 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.74 0.33 -0.32
20 AT1G04220 3-ketoacyl-CoA synthase 2 3-ketoacyl-CoA synthase 2 0.74 0.3 -0.3
21 AT1G69360 Plant protein of unknown function (DUF863) 0.74 0.31 -0.31
22 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 -0.74 0.33 -0.29
23 AT5G04230 phenyl alanine ammonia-lyase 3 ATPAL3, phenyl alanine
ammonia-lyase 3		 -0.73 0.33 -0.32
24 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 -0.73 0.33 -0.3
25 AT5G16590 Leucine-rich repeat protein kinase family protein Leucine rich repeat protein 1 -0.73 0.3 -0.34
26 AT5G63410 Leucine-rich repeat protein kinase family protein -0.73 0.33 -0.32
27 AT4G12030 bile acid transporter 5 BILE ACID:SODIUM SYMPORTER FAMILY
PROTEIN 5, bile acid transporter 5		 -0.73 0.33 -0.32
28 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 0.73 0.33 -0.31
29 AT3G11420 Protein of unknown function (DUF604) 0.73 0.33 -0.33
30 AT3G48510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits
to 98 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.31 -0.3
31 AT1G31200 phloem protein 2-A9 phloem protein 2-A9, phloem
protein 2-A9		 -0.72 0.31 -0.32
32 AT4G28980 CDK-activating kinase 1AT CDK-activating kinase 1AT,
CYCLIN-DEPENDENT KINASE F;1		 -0.72 0.31 -0.33
33 AT3G03170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits
to 184 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.29 -0.31
34 AT4G00200 AT hook motif DNA-binding family protein 0.72 0.32 -0.32
35 AT2G03350 Protein of unknown function, DUF538 -0.72 0.3 -0.33
36 AT2G25790 Leucine-rich receptor-like protein kinase family protein 0.72 0.32 -0.3
37 AT1G09160 Protein phosphatase 2C family protein -0.72 0.3 -0.31
38 AT1G59740 Major facilitator superfamily protein 0.72 0.33 -0.33
39 AT5G51460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 ATTPPA -0.72 0.33 -0.31
40 AT1G56430 nicotianamine synthase 4 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 4, nicotianamine synthase
4		 -0.72 0.31 -0.32
41 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.72 0.32 -0.35
42 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.72 0.32 -0.3
43 AT5G13010 RNA helicase family protein embryo defective 3011 0.71 0.33 -0.3
44 AT3G49260 IQ-domain 21 IQ-domain 21 -0.71 0.3 -0.3
45 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 0.71 0.32 -0.31
46 AT2G07440 two-component responsive regulator-related / response
regulator protein-related		 -0.71 0.3 -0.31
47 AT2G43100 isopropylmalate isomerase 2 ATLEUD1, isopropylmalate isomerase
2		 -0.71 0.32 -0.33
48 AT1G68585 unknown protein; Has 23 Blast hits to 23 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.32 -0.3
49 AT5G46800 Mitochondrial substrate carrier family protein A BOUT DE SOUFFLE -0.71 0.34 -0.3
50 AT3G19100 Protein kinase superfamily protein 0.71 0.32 -0.31
51 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 -0.71 0.31 -0.32
52 AT1G04530 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 4 -0.71 0.32 -0.3
53 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 0.71 0.31 -0.32
54 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.71 0.29 -0.31
55 AT2G37460 nodulin MtN21 /EamA-like transporter family protein -0.71 0.3 -0.3
56 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.3 -0.33
57 AT3G05730 Encodes a defensin-like (DEFL) family protein. -0.71 0.29 -0.32
58 AT2G42580 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat
thioredoxin-like 3,
VHI-INTERACTING TPR CONTAINING
PROTEIN		 -0.7 0.33 -0.3
59 AT1G74960 fatty acid biosynthesis 1 ARABIDOPSIS BETA-KETOACYL-ACP
SYNTHETASE 2, fatty acid
biosynthesis 1, BETA-KETOACYL-ACP
SYNTHETASE 2		 -0.7 0.32 -0.3
60 AT5G66780 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.31 -0.32
61 AT3G49560 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.7 0.33 -0.27
62 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 -0.7 0.31 -0.33
63 AT5G04160 Nucleotide-sugar transporter family protein -0.7 0.31 -0.32
64 AT1G18640 3-phosphoserine phosphatase 3-phosphoserine phosphatase -0.7 0.31 -0.32
65 AT3G24140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FAMA -0.7 0.33 -0.31
66 AT5G50420 O-fucosyltransferase family protein -0.7 0.29 -0.32
67 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B 0.7 0.29 -0.3
68 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.7 0.32 -0.29
69 AT1G05340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast
hits to 189 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.31
70 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.69 0.31 -0.31
71 AT4G39740 Thioredoxin superfamily protein homologue of copper chaperone SCO1
2		 -0.69 0.32 -0.3
72 AT5G09820 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.69 0.32 -0.32
73 AT4G26840 small ubiquitin-like modifier 1 ARABIDOPSIS THALIANA SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, small
ubiquitin-like modifier 1		 -0.69 0.33 -0.32
74 AT5G67560 ADP-ribosylation factor-like A1D ADP-ribosylation factor-like A1D,
ADP-ribosylation factor-like A1D		 -0.69 0.29 -0.32
75 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 0.69 0.32 -0.29
76 AT1G56510 Disease resistance protein (TIR-NBS-LRR class) ACTIVATED DISEASE RESISTANCE 2,
WHITE RUST RESISTANCE 4		 -0.69 0.31 -0.32
77 AT5G05010 clathrin adaptor complexes medium subunit family protein -0.69 0.29 -0.3
78 AT3G45230 hydroxyproline-rich glycoprotein family protein -0.69 0.33 -0.28
79 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 -0.69 0.29 -0.31
80 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.69 0.32 -0.33
81 AT2G28080 UDP-Glycosyltransferase superfamily protein -0.69 0.33 -0.32
82 AT4G28210 embryo defective 1923 embryo defective 1923 -0.69 0.32 -0.33
83 AT2G41280 late embryogenesis abundant protein (M10) / LEA protein M10 ATM10, M10 0.69 0.3 -0.3
84 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.3 -0.31
85 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.69 0.34 -0.31
86 AT5G06770 KH domain-containing protein / zinc finger (CCCH type)
family protein		 -0.69 0.33 -0.36
87 AT1G10480 zinc finger protein 5 zinc finger protein 5 0.68 0.33 -0.32
88 AT3G24230 Pectate lyase family protein -0.68 0.34 -0.31
89 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS 0.68 0.3 -0.32
90 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 0.68 0.3 -0.33
91 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 -0.68 0.31 -0.3
92 AT1G78030 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (duplicated DUF1399)
(TAIR:AT4G37900.1); Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.31 -0.3
93 AT5G53940 Yippee family putative zinc-binding protein -0.68 0.32 -0.3
94 AT4G13770 cytochrome P450, family 83, subfamily A, polypeptide 1 cytochrome P450, family 83,
subfamily A, polypeptide 1,
REDUCED EPIDERMAL FLUORESCENCE 2		 -0.68 0.31 -0.32
95 AT2G43130 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARA-4, ARA4, ATRAB11F, ARABIDOPSIS
RAB GTPASE HOMOLOG A5C, RABA5C		 -0.68 0.3 -0.33
96 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 -0.68 0.32 -0.34
97 AT3G21950 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.31 -0.31
98 AT5G27490 Integral membrane Yip1 family protein -0.68 0.32 -0.33
99 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT -0.68 0.31 -0.35
100 AT5G19240 Glycoprotein membrane precursor GPI-anchored -0.68 0.33 -0.33
101 AT1G28260 Telomerase activating protein Est1 0.68 0.31 -0.33
102 AT2G14660 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0310
(InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins
in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73;
Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes -
1420 (source: NCBI BLink).		 -0.68 0.3 -0.31
103 AT2G07505 zinc ion binding -0.68 0.29 -0.32
104 AT3G02850 STELAR K+ outward rectifier STELAR K+ outward rectifier -0.67 0.32 -0.29
105 AT5G52060 BCL-2-associated athanogene 1 BCL-2-associated athanogene 1,
BCL-2-associated athanogene 1		 -0.67 0.3 -0.32
106 AT2G26900 Sodium Bile acid symporter family bile acid:sodium symporter family
protein 2		 -0.67 0.31 -0.33
107 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2499 (InterPro:IPR019634);
Has 319 Blast hits to 317 proteins in 103 species: Archae -
0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).		 -0.67 0.29 -0.32
108 AT1G78460 SOUL heme-binding family protein -0.67 0.3 -0.32
109 AT5G67340 ARM repeat superfamily protein 0.67 0.31 -0.34
110 AT1G78370 glutathione S-transferase TAU 20 glutathione S-transferase TAU 20,
glutathione S-transferase TAU 20		 -0.67 0.33 -0.31
111 AT4G36770 UDP-Glycosyltransferase superfamily protein -0.67 0.3 -0.32
112 AT2G22680 Zinc finger (C3HC4-type RING finger) family protein WAV3 homolog 1 0.67 0.31 -0.31
113 AT3G16850 Pectin lyase-like superfamily protein -0.67 0.31 -0.32
114 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 -0.67 0.29 -0.29
115 AT3G07010 Pectin lyase-like superfamily protein -0.67 0.32 -0.32
116 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.32
117 AT1G53120 RNA-binding S4 domain-containing protein -0.67 0.31 -0.32
118 AT1G65960 glutamate decarboxylase 2 glutamate decarboxylase 2 -0.67 0.29 -0.32
119 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 0.66 0.33 -0.29
120 AT5G07010 sulfotransferase 2A ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2A,
sulfotransferase 2A		 0.66 0.31 -0.32
121 AT2G46920 Protein phosphatase 2C family protein poltergeist 0.66 0.32 -0.31
122 AT1G65920 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.66 0.31 -0.3
123 AT5G07330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.3
124 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 0.66 0.31 -0.34
125 AT5G57810 tetraspanin15 tetraspanin15 0.65 0.31 -0.32
126 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 0.65 0.32 -0.31
127 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 0.65 0.31 -0.31
128 AT2G12720 transposable element gene 0.64 0.31 -0.32
129 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 0.64 0.31 -0.34
130 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.64 0.31 -0.32
131 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 0.64 0.32 -0.3
132 AT1G05577 Domain of unknown function (DUF966) 0.64 0.32 -0.3
133 AT2G35300 Late embryogenesis abundant protein, group 1 protein late embryogenesis abundant 4-2,
late embryogenesis abundant 18,
late embryogenesis abundant 4-2		 0.63 0.29 -0.28
134 AT5G06080 LOB domain-containing protein 33 LOB domain-containing protein 33 0.63 0.33 -0.31
135 AT3G29180 Protein of unknown function (DUF1336) 0.63 0.31 -0.3
136 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 0.63 0.33 -0.3
137 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.3
138 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.63 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
139 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.87 0.44 -0.45
140 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		0.78 0.43 -0.46 C0123