AT2G26930 : 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.....
Query Information
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AGICode AT2G26930
Description 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 1 0.29 -0.31
2 AT3G13120 Ribosomal protein S10p/S20e family protein 0.95 0.31 -0.32
3 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.94 0.32 -0.31
4 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.94 0.32 -0.32
5 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.94 0.3 -0.33
6 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.94 0.32 -0.32
7 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.94 0.29 -0.32
8 AT3G28460 methyltransferases 0.93 0.3 -0.32
9 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.93 0.34 -0.3
10 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.93 0.31 -0.31
11 AT1G53520 Chalcone-flavanone isomerase family protein 0.93 0.33 -0.33
12 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.93 0.33 -0.35
13 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.93 0.34 -0.31
14 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.92 0.32 -0.33
15 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.92 0.33 -0.33
16 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.92 0.32 -0.33
17 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.92 0.31 -0.33
18 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.92 0.32 -0.31
19 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.92 0.33 -0.32
20 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.92 0.31 -0.3
21 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.92 0.29 -0.3
22 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.92 0.31 -0.31
23 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.92 0.32 -0.32
24 AT1G14270 CAAX amino terminal protease family protein 0.92 0.32 -0.3
25 AT3G20230 Ribosomal L18p/L5e family protein 0.92 0.3 -0.33
26 AT2G18710 SECY homolog 1 SECY homolog 1 0.92 0.35 -0.32
27 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.92 0.33 -0.31
28 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.29 -0.33
29 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.91 0.3 -0.31
30 AT5G65220 Ribosomal L29 family protein 0.91 0.32 -0.32
31 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.91 0.31 -0.33
32 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.91 0.32 -0.32
33 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.91 0.3 -0.31
34 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.91 0.31 -0.33
35 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.91 0.31 -0.32
36 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.91 0.31 -0.31
37 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.91 0.32 -0.31
38 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.91 0.33 -0.29
39 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.91 0.32 -0.32
40 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.91 0.31 -0.33
41 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.31 -0.32
42 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.91 0.3 -0.33
43 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.91 0.33 -0.32
44 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.91 0.3 -0.3
45 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.32 -0.31
46 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.91 0.34 -0.3
47 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.9 0.28 -0.34
48 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.9 0.33 -0.32
49 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.9 0.33 -0.31
50 AT3G54210 Ribosomal protein L17 family protein 0.9 0.31 -0.31
51 AT4G34290 SWIB/MDM2 domain superfamily protein 0.9 0.31 -0.34
52 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.9 0.31 -0.32
53 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.9 0.31 -0.31
54 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.9 0.31 -0.32
55 AT2G33450 Ribosomal L28 family 0.9 0.3 -0.3
56 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.9 0.35 -0.32
57 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.9 0.31 -0.32
58 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.9 0.31 -0.31
59 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.9 0.33 -0.3
60 AT1G78180 Mitochondrial substrate carrier family protein 0.9 0.3 -0.31
61 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.32 -0.34
62 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.9 0.3 -0.3
63 AT5G45680 FK506-binding protein 13 FK506 BINDING PROTEIN 13,
FK506-binding protein 13		 0.9 0.31 -0.33
64 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.9 0.31 -0.35
65 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.9 0.3 -0.3
66 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.9 0.32 -0.33
67 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.9 0.3 -0.31
68 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.9 0.32 -0.33
69 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.9 0.31 -0.32
70 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.9 0.32 -0.31
71 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.9 0.33 -0.31
72 AT1G32470 Single hybrid motif superfamily protein 0.9 0.33 -0.3
73 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.9 0.31 -0.33
74 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.9 0.33 -0.29
75 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.9 0.31 -0.31
76 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.9 0.32 -0.3
77 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.32 -0.32
78 AT4G15510 Photosystem II reaction center PsbP family protein 0.9 0.3 -0.31
79 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.9 0.3 -0.3
80 AT5G52970 thylakoid lumen 15.0 kDa protein 0.9 0.3 -0.32
81 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.9 0.31 -0.31
82 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.9 0.3 -0.32
83 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.9 0.32 -0.31
84 AT1G14030 Rubisco methyltransferase family protein 0.9 0.34 -0.31
85 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.89 0.32 -0.3
86 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein AtPLR1, pyridoxal reductase 1 0.89 0.33 -0.33
87 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.89 0.32 -0.33
88 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 0.89 0.32 -0.31
89 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 0.89 0.31 -0.29
90 AT1G76405 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.31 -0.3
91 AT4G17740 Peptidase S41 family protein 0.89 0.34 -0.32
92 AT3G12930 Lojap-related protein 0.89 0.31 -0.32
93 AT5G47190 Ribosomal protein L19 family protein 0.89 0.31 -0.32
94 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.3 -0.32
95 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.89 0.33 -0.31
96 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.33 -0.3
97 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.89 0.31 -0.31
98 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.89 0.33 -0.31
99 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.89 0.33 -0.31
100 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.89 0.31 -0.3
101 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.89 0.29 -0.3
102 AT3G29185 Domain of unknown function (DUF3598) 0.89 0.33 -0.33
103 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.3 -0.3
104 AT5G05740 ethylene-dependent gravitropism-deficient and
yellow-green-like 2		 ATEGY2, ethylene-dependent
gravitropism-deficient and
yellow-green-like 2		 0.89 0.34 -0.32
105 AT4G26370 antitermination NusB domain-containing protein 0.89 0.31 -0.34
106 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.89 0.32 -0.34
107 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.89 0.32 -0.33
108 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.89 0.31 -0.31
109 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.89 0.31 -0.31
110 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.33 -0.32
111 AT5G55220 trigger factor type chaperone family protein 0.89 0.33 -0.33
112 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.89 0.32 -0.32
113 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.31 -0.29
114 AT1G11860 Glycine cleavage T-protein family 0.89 0.32 -0.32
115 AT1G63840 RING/U-box superfamily protein -0.88 0.3 -0.31
116 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.85 0.31 -0.32
117 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.81 0.31 -0.32
118 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.79 0.31 -0.32
119 AT5G53760 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 11,
MILDEW RESISTANCE LOCUS O 11		 -0.78 0.3 -0.31
120 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.78 0.33 -0.31
121 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.77 0.32 -0.33
122 AT1G63460 glutathione peroxidase 8 ATGPX8, glutathione peroxidase 8 -0.76 0.31 -0.32
123 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.31 -0.32
124 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.75 0.31 -0.29
125 AT2G06255 ELF4-like 3 ELF4-like 3 -0.75 0.31 -0.31
126 AT3G57380 Glycosyltransferase family 61 protein -0.74 0.33 -0.33
127 AT4G14010 ralf-like 32 ralf-like 32 -0.73 0.31 -0.29
128 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 -0.73 0.32 -0.34
129 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 -0.73 0.31 -0.31
130 AT3G08720 serine/threonine protein kinase 2 Arabidopsis thaliana protein
kinase 19, ARABIDOPSIS THALIANA
PROTEIN KINASE 2, ARABIDOPSIS
THALIANA SERINE/THREONINE PROTEIN
KINASE 2, serine/threonine protein
kinase 2		 -0.71 0.33 -0.3
131 AT4G11670 Protein of unknown function (DUF810) -0.7 0.31 -0.34