AT2G44610 : ATRAB6A
Query Information
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AGICode AT2G44610
Description Ras-related small GTP-binding family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 1 0.31 -0.32
2 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 0.83 0.3 -0.31
3 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.81 0.3 -0.29
4 AT2G34590 Transketolase family protein 0.79 0.35 -0.31
5 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein 0.79 0.31 -0.3
6 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.77 0.32 -0.33
7 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.76 0.35 -0.32
8 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.76 0.29 -0.33
9 AT4G12230 alpha/beta-Hydrolases superfamily protein 0.76 0.31 -0.31
10 AT3G04830 Protein prenylyltransferase superfamily protein 0.75 0.33 -0.32
11 AT1G03350 BSD domain-containing protein 0.75 0.31 -0.34
12 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.75 0.31 -0.29
13 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.75 0.31 -0.33
14 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.32 -0.33
15 AT2G19790 SNARE-like superfamily protein 0.75 0.3 -0.28
16 AT3G07470 Protein of unknown function, DUF538 0.74 0.32 -0.33
17 AT1G65650 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH2 0.73 0.31 -0.3
18 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.73 0.31 -0.33
19 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.73 0.32 -0.3
20 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.73 0.31 -0.31
21 AT5G59910 Histone superfamily protein HTB4 0.73 0.33 -0.32
22 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 0.73 0.31 -0.3
23 AT1G65270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; Has
149 Blast hits to 149 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.73 0.32 -0.32
24 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.73 0.31 -0.33
25 AT5G20500 Glutaredoxin family protein 0.73 0.35 -0.31
26 AT1G76920 F-box family protein 0.73 0.29 -0.31
27 AT5G54760 Translation initiation factor SUI1 family protein 0.73 0.33 -0.32
28 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.72 0.32 -0.33
29 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.72 0.3 -0.3
30 AT5G09310 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl
protease complex, presenilin enhancer-2 subunit
(InterPro:IPR019379); Has 168 Blast hits to 168 proteins in
71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi
- 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 0.72 0.32 -0.3
31 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.31 -0.32
32 AT2G32390 glutamate receptor 3.5 glutamate receptor 3.5, glutamate
receptor 3.5, GLR6		 0.72 0.31 -0.31
33 AT3G49910 Translation protein SH3-like family protein 0.72 0.32 -0.32
34 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.72 0.32 -0.33
35 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.72 0.29 -0.29
36 AT3G04120 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C SUBUNIT, GAPC-1,
glyceraldehyde-3-phosphate
dehydrogenase C subunit 1		 0.72 0.3 -0.32
37 AT2G36485 ENTH/VHS family protein 0.72 0.33 -0.3
38 AT5G11010 Pre-mRNA cleavage complex II protein family 0.72 0.29 -0.32
39 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.72 0.33 -0.33
40 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 0.72 0.3 -0.3
41 AT1G48900 Signal recognition particle, SRP54 subunit protein 0.71 0.31 -0.31
42 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.71 0.31 -0.31
43 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein 0.71 0.31 -0.32
44 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 0.71 0.29 -0.33
45 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.71 0.31 -0.3
46 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.71 0.31 -0.32
47 AT5G02280 SNARE-like superfamily protein 0.71 0.33 -0.29
48 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.71 0.32 -0.31
49 AT1G21230 wall associated kinase 5 wall associated kinase 5 0.71 0.33 -0.31
50 AT5G60860 RAB GTPase homolog A1F RAB GTPase homolog A1F, RAB GTPase
homolog A1F		 0.7 0.3 -0.3
51 AT5G38480 general regulatory factor 3 general regulatory factor 3, RCI1 0.7 0.33 -0.32
52 AT4G27090 Ribosomal protein L14 0.7 0.34 -0.33
53 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein 0.69 0.31 -0.3
54 AT5G07370 inositol polyphosphate kinase 2 alpha INOSITOL POLYPHOSPHATE KINASE 2
ALPHA, inositol polyphosphate
kinase 2 alpha		 0.69 0.32 -0.32
55 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.69 0.31 -0.32
56 AT5G49820 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 6 0.69 0.31 -0.29
57 AT1G07570 Protein kinase superfamily protein APK1, APK1A 0.69 0.31 -0.34
58 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.69 0.33 -0.3
59 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.69 0.33 -0.31
60 AT2G01410 NHL domain-containing protein 0.68 0.32 -0.32
61 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 0.68 0.3 -0.32
62 AT3G57570 ARM repeat superfamily protein -0.68 0.32 -0.32
63 AT5G57230 Thioredoxin superfamily protein 0.68 0.29 -0.32
64 AT2G03870 Small nuclear ribonucleoprotein family protein EMBRYO DEFECTIVE 2816 0.68 0.31 -0.3
65 AT1G72570 Integrase-type DNA-binding superfamily protein 0.68 0.32 -0.32
66 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.32 -0.32
67 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.32 -0.29
68 AT5G39250 F-box family protein 0.68 0.31 -0.31
69 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.68 0.31 -0.3
70 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.68 0.33 -0.29
71 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.68 0.31 -0.31
72 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.67 0.31 -0.33
73 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.33 -0.32
74 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.31
75 AT5G14240 Thioredoxin superfamily protein 0.67 0.31 -0.36
76 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.67 0.31 -0.31
77 AT5G42000 ORMDL family protein 0.67 0.32 -0.32
78 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.67 0.32 -0.33
79 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.67 0.31 -0.31
80 AT4G21160 Calcium-dependent ARF-type GTPase activating protein family ARF-GAP domain 12, ZAC 0.67 0.33 -0.31
81 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein		 vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2		 0.67 0.3 -0.31
82 AT2G06090 Plant self-incompatibility protein S1 family 0.67 0.31 -0.31
83 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 0.67 0.29 -0.36
84 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.31 -0.33
85 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.3
86 AT3G42460 transposable element gene -0.64 0.34 -0.31
87 AT3G42600 transposable element gene -0.64 0.3 -0.35
88 AT5G08210 MIR834a; miRNA microRNA834A -0.64 0.29 -0.3
89 AT3G52080 cation/hydrogen exchanger 28 cation/hydrogen exchanger 28 -0.64 0.31 -0.32
90 AT1G43260 hAT transposon superfamily protein -0.64 0.31 -0.34
91 AT5G12460 Protein of unknown function (DUF604) -0.63 0.31 -0.33
92 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.63 0.32 -0.32
93 AT5G49350 Glycine-rich protein family -0.62 0.32 -0.3
94 AT5G51290 Diacylglycerol kinase family protein -0.62 0.32 -0.3
95 AT4G20490 transposable element gene -0.62 0.32 -0.32
96 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 -0.61 0.33 -0.32
97 AT2G07650 transposable element gene -0.61 0.31 -0.32
98 AT5G35670 IQ-domain 33 IQ-domain 33 -0.61 0.31 -0.33
99 AT2G03460 Galactose oxidase/kelch repeat superfamily protein -0.6 0.31 -0.34
100 AT1G63560 Receptor-like protein kinase-related family protein -0.6 0.32 -0.31
101 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.6 0.32 -0.31
102 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.34 -0.33
103 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 -0.6 0.31 -0.3
104 ATMG00400 hypothetical protein ORF157 -0.59 0.3 -0.32
105 AT3G25400 CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase
MazG-related, RS21-C6 (InterPro:IPR011394), EAR
(InterPro:IPR009039), NTP pyrophosphohydrolase MazG,
putative catalytic core (InterPro:IPR004518); Has 1123
Blast hits to 1121 proteins in 452 species: Archae - 22;
Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83;
Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).		 -0.59 0.33 -0.3
106 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.58 0.32 -0.28
107 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.57 0.31 -0.32
108 AT2G46590 Dof-type zinc finger DNA-binding family protein DOF AFFECTING GERMINATION 2 -0.57 0.32 -0.3
109 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.3 -0.34
110 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.56 0.31 -0.33
111 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.32 -0.3
112 AT4G09360 NB-ARC domain-containing disease resistance protein -0.56 0.3 -0.31
113 AT5G38370 Protein of unknown function (DUF1644) -0.55 0.32 -0.31
114 AT1G49960 Xanthine/uracil permease family protein -0.55 0.32 -0.33
115 AT4G23960 F-box family protein -0.55 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.76 0.42 -0.44 C0109
117 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.74 0.45 -0.45 C0136