AT2G39540 : -
Query Information
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AGICode AT2G39540
Description Gibberellin-regulated family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39540 Gibberellin-regulated family protein 1 0.33 -0.31
2 AT2G03540 transposable element gene 0.73 0.29 -0.33
3 AT1G58190 receptor like protein 9 receptor like protein 9, receptor
like protein 9		 -0.71 0.3 -0.33
4 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 0.7 0.31 -0.34
5 AT4G13160 Protein of unknown function, DUF593 0.7 0.31 -0.31
6 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.67 0.33 -0.31
7 AT2G25500 Inosine triphosphate pyrophosphatase family protein 0.66 0.31 -0.31
8 AT1G07745 homolog of RAD51 D ATRAD51D, homolog of RAD51 D,
SUPPRESOR OF SNI1		 0.65 0.33 -0.3
9 AT5G60140 AP2/B3-like transcriptional factor family protein -0.65 0.31 -0.31
10 ATMG01000 hypothetical protein ORF114 0.65 0.31 -0.31
11 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.64 0.34 -0.31
12 AT3G20490 unknown protein; Has 754 Blast hits to 165 proteins in 64
species: Archae - 0; Bacteria - 48; Metazoa - 26; Fungi -
25; Plants - 36; Viruses - 0; Other Eukaryotes - 619
(source: NCBI BLink).		 -0.64 0.32 -0.33
13 ATCG00500 acetyl-CoA carboxylase carboxyl transferase subunit beta acetyl-CoA carboxylase carboxyl
transferase subunit beta		 0.64 0.34 -0.33
14 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.63 0.31 -0.31
15 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712		 0.63 0.32 -0.32
16 ATMG00870 hypothetical protein ORF184 0.63 0.3 -0.32
17 AT4G31970 cytochrome P450, family 82, subfamily C, polypeptide 2 cytochrome P450, family 82,
subfamily C, polypeptide 2		 -0.63 0.28 -0.32
18 ATCG01060 iron-sulfur cluster binding;electron carriers;4 iron, 4
sulfur cluster binding		 PSAC 0.62 0.31 -0.33
19 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 0.62 0.31 -0.33
20 ATCG00590 electron carriers ORF31 0.62 0.32 -0.31
21 AT2G02230 phloem protein 2-B1 phloem protein 2-B1, phloem
protein 2-B1		 0.62 0.29 -0.31
22 AT3G16970 Plant self-incompatibility protein S1 family 0.61 0.31 -0.31
23 AT5G47790 SMAD/FHA domain-containing protein -0.61 0.31 -0.33
24 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.32 -0.31
25 AT1G23690 Domain of unknown function DUF220 0.61 0.31 -0.29
26 AT5G20730 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 7, BIPOSTO,
indole-3-acetic acid inducible 21,
indole-3-acetic acid inducible 23,
indole-3-acetic acid inducible 25,
MASSUGU 1, NON-PHOTOTROPHIC
HYPOCOTYL, TRANSPORT INHIBITOR
RESPONSE 5		 0.61 0.31 -0.32
27 AT2G28660 Chloroplast-targeted copper chaperone protein -0.61 0.31 -0.28
28 AT1G52020 transposable element gene -0.61 0.33 -0.29
29 AT1G19710 UDP-Glycosyltransferase superfamily protein -0.6 0.29 -0.32
30 AT3G07940 Calcium-dependent ARF-type GTPase activating protein family 0.6 0.3 -0.31
31 AT2G30710 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.6 0.32 -0.32
32 AT1G73620 Pathogenesis-related thaumatin superfamily protein -0.6 0.31 -0.31
33 AT5G49750 Leucine-rich repeat (LRR) family protein 0.6 0.33 -0.31
34 AT5G62100 BCL-2-associated athanogene 2 BCL-2-associated athanogene 2,
BCL-2-associated athanogene 2		 0.6 0.32 -0.34
35 AT5G59000 RING/FYVE/PHD zinc finger superfamily protein 0.6 0.33 -0.32
36 AT3G21520 DUF679 domain membrane protein 1 Arabidopsis thaliana DUF679 domain
membrane protein 1, DUF679 domain
membrane protein 1		 0.6 0.32 -0.33
37 AT1G26970 Protein kinase superfamily protein 0.6 0.32 -0.33
38 AT1G05990 EF hand calcium-binding protein family ROOT HAIR SPECIFIC 1 0.59 0.34 -0.3
39 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.59 0.32 -0.32
40 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.33 -0.34
41 AT1G66510 AAR2 protein family -0.59 0.31 -0.32
42 AT2G06390 transposable element gene -0.59 0.31 -0.31
43 AT2G24520 H(+)-ATPase 5 H(+)-ATPase 5, H(+)-ATPase 5 0.59 0.32 -0.33
44 AT1G74090 desulfo-glucosinolate sulfotransferase 18 DESULFO-GLUCOSINOLATE
SULFOTRANSFERASE 18, ARABIDOPSIS
SULFOTRANSFERASE 5B,
desulfo-glucosinolate
sulfotransferase 18		 -0.58 0.33 -0.31
45 AT5G37730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.32 -0.3
46 AT2G03840 tetraspanin13 tetraspanin13 0.58 0.3 -0.33
47 AT4G39610 Protein of unknown function, DUF617 0.58 0.33 -0.31
48 AT1G08170 Histone superfamily protein 0.58 0.3 -0.29
49 AT4G38070 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.58 0.31 -0.29
50 AT2G20510 translocase inner membrane subunit 44-1 translocase inner membrane subunit
44-1, translocase inner membrane
subunit 44-1		 -0.58 0.33 -0.32
51 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 -0.58 0.32 -0.32
52 AT1G51210 UDP-Glycosyltransferase superfamily protein 0.58 0.32 -0.3
53 AT5G42340 Plant U-Box 15 Plant U-Box 15 0.57 0.32 -0.31
54 AT5G39380 Plant calmodulin-binding protein-related -0.57 0.3 -0.3
55 AT2G18180 Sec14p-like phosphatidylinositol transfer family protein 0.57 0.32 -0.34
56 ATCG00140 ATP synthase subunit C family protein ATPH 0.56 0.3 -0.3
57 AT5G55980 serine-rich protein-related 0.56 0.31 -0.32
58 AT3G04990 BEST Arabidopsis thaliana protein match is: Frigida-like
protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560
proteins in 1427 species: Archae - 757; Bacteria - 4112;
Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71;
Other Eukaryotes - 8080 (source: NCBI BLink).		 -0.56 0.32 -0.31
59 AT1G21860 SKU5 similar 7 SKU5 similar 7 -0.56 0.34 -0.32
60 AT5G37090 transposable element gene -0.56 0.32 -0.32
61 AT5G42880 Plant protein of unknown function (DUF827) -0.56 0.3 -0.32
62 AT2G17750 NEP-interacting protein 1 NEP-interacting protein 1 0.56 0.32 -0.31
63 AT2G20740 Tetraspanin family protein 0.56 0.33 -0.32
64 ATCG00130 ATPase, F0 complex, subunit B/B', bacterial/chloroplast ATPF 0.56 0.29 -0.3
65 AT4G09710 transposable element gene 0.56 0.3 -0.31
66 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 0.56 0.32 -0.33
67 AT2G18590 Major facilitator superfamily protein 0.56 0.35 -0.29
68 AT5G62940 Dof-type zinc finger DNA-binding family protein DNA BINDING WITH ONE FINGER 5.6,
HIGH CAMBIAL ACTIVITY2		 0.55 0.31 -0.32
69 AT3G22920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.55 0.3 -0.3
70 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 0.55 0.29 -0.31
71 AT1G34410 auxin response factor 21 auxin response factor 21 0.55 0.29 -0.29
72 AT2G28990 Leucine-rich repeat protein kinase family protein 0.55 0.32 -0.34
73 AT1G65860 flavin-monooxygenase glucosinolate S-oxygenase 1 flavin-monooxygenase glucosinolate
S-oxygenase 1		 -0.55 0.3 -0.31
74 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.54 0.29 -0.33
75 AT3G21850 SKP1-like 9 SKP1-like 9, SKP1-like 9 -0.54 0.32 -0.32
76 AT5G54230 myb domain protein 49 myb domain protein 49, myb domain
protein 49		 -0.53 0.31 -0.32
77 AT1G32730 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12
plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118
proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa -
63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes -
12 (source: NCBI BLink).		 -0.53 0.32 -0.33
78 AT2G12320 transposable element gene -0.52 0.31 -0.28
79 AT5G16690 origin recognition complex subunit 3 ATORC3, origin recognition complex
subunit 3		 -0.52 0.32 -0.29
80 AT3G61230 GATA type zinc finger transcription factor family protein PLIM2c -0.52 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.72 0.46 -0.47
82 C0103 Glutaric acid - - - -0.65 0.46 -0.43