AT2G39280 : -
Query Information
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AGICode AT2G39280
Description Ypt/Rab-GAP domain of gyp1p superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein 1 0.3 -0.32
2 AT2G22160 Cysteine proteinases superfamily protein 0.7 0.32 -0.34
3 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 0.67 0.3 -0.31
4 AT3G51210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.31 -0.3
5 AT2G16190 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13;
Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.66 0.31 -0.29
6 AT2G15700 transposable element gene 0.66 0.31 -0.29
7 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.65 0.34 -0.31
8 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 0.65 0.32 -0.31
9 AT3G47230 transposable element gene -0.64 0.31 -0.32
10 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.31 -0.31
11 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 0.64 0.3 -0.31
12 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.64 0.32 -0.32
13 AT2G20550 HSP40/DnaJ peptide-binding protein -0.64 0.31 -0.31
14 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.63 0.34 -0.29
15 AT1G02580 SET domain-containing protein EMBRYO DEFECTIVE 173,
FERTILIZATION INDEPENDENT SEED 1,
MEDEA, SET DOMAIN-CONTAINING
PROTEIN 5		 0.63 0.34 -0.34
16 AT3G43680 transposable element gene -0.63 0.32 -0.32
17 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 0.62 0.35 -0.32
18 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.29
19 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL -0.62 0.31 -0.32
20 AT5G58190 evolutionarily conserved C-terminal region 10 evolutionarily conserved
C-terminal region 10		 -0.62 0.3 -0.31
21 AT1G27520 Glycosyl hydrolase family 47 protein 0.62 0.31 -0.31
22 AT1G31040 PLATZ transcription factor family protein -0.62 0.31 -0.31
23 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA -0.61 0.33 -0.34
24 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 -0.61 0.31 -0.31
25 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.61 0.32 -0.3
26 AT4G13480 myb domain protein 79 myb domain protein 79, myb domain
protein 79		 -0.61 0.33 -0.3
27 AT5G18750 DNAJ heat shock N-terminal domain-containing protein -0.61 0.32 -0.34
28 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.61 0.32 -0.3
29 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.61 0.31 -0.32
30 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 0.61 0.32 -0.31
31 AT5G28790 transposable element gene 0.61 0.31 -0.3
32 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 -0.6 0.34 -0.31
33 AT1G34530 transposable element gene 0.6 0.31 -0.34
34 AT2G46920 Protein phosphatase 2C family protein poltergeist -0.6 0.32 -0.31
35 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.6 0.32 -0.33
36 AT5G37900 TRAF-like superfamily protein -0.6 0.31 -0.32
37 AT4G22620 SAUR-like auxin-responsive protein family -0.6 0.33 -0.32
38 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 0.6 0.29 -0.31
39 AT3G02400 SMAD/FHA domain-containing protein -0.6 0.32 -0.31
40 AT5G19090 Heavy metal transport/detoxification superfamily protein -0.6 0.33 -0.35
41 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 -0.6 0.34 -0.32
42 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.32
43 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.3 -0.31
44 AT5G49070 3-ketoacyl-CoA synthase 21 3-ketoacyl-CoA synthase 21 0.59 0.32 -0.31
45 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.29
46 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.59 0.31 -0.3
47 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 0.59 0.31 -0.32
48 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.59 0.31 -0.29
49 AT4G16030 Ribosomal protein L19e family protein 0.58 0.34 -0.32
50 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 -0.58 0.32 -0.32
51 AT4G35650 isocitrate dehydrogenase III isocitrate dehydrogenase III 0.58 0.3 -0.33
52 AT5G45370 nodulin MtN21 /EamA-like transporter family protein 0.58 0.33 -0.33
53 AT3G48185 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.3
54 AT3G14750 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits
to 3091 proteins in 519 species: Archae - 61; Bacteria -
669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses -
4; Other Eukaryotes - 1123 (source: NCBI BLink).		 0.58 0.31 -0.33
55 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 0.58 0.3 -0.3
56 AT4G04300 transposable element gene -0.57 0.32 -0.31
57 AT5G09380 RNA polymerase III RPC4 0.57 0.33 -0.31
58 AT5G28240 transposable element gene -0.57 0.32 -0.29
59 AT2G14420 transposable element gene 0.57 0.3 -0.33
60 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein -0.57 0.3 -0.32
61 AT1G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to
9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.32 -0.31
62 AT3G53290 cytochrome P450, family 71, subfamily B, polypeptide 30
pseudogene		 cytochrome P450, family 71,
subfamily B, polypeptide 30
pseudogene		 -0.56 0.33 -0.32
63 AT4G05300 transposable element gene -0.56 0.32 -0.32
64 AT5G55060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in
80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi
- 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33
(source: NCBI BLink).		 0.56 0.3 -0.31
65 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.56 0.33 -0.33
66 AT3G24060 Plant self-incompatibility protein S1 family 0.56 0.31 -0.32
67 AT3G09660 minichromosome maintenance 8 minichromosome maintenance 8 0.56 0.32 -0.3
68 AT3G50050 Eukaryotic aspartyl protease family protein -0.56 0.32 -0.31
69 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.3 -0.32
70 AT2G44420 protein N-terminal asparagine amidohydrolase family protein 0.56 0.32 -0.31
71 AT1G31240 Bromodomain transcription factor -0.56 0.31 -0.33
72 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.56 0.34 -0.3
73 AT4G34250 3-ketoacyl-CoA synthase 16 3-ketoacyl-CoA synthase 16 -0.56 0.32 -0.32
74 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain 0.55 0.31 -0.31
75 AT3G44270 transposable element gene -0.55 0.33 -0.28
76 AT4G33390 Plant protein of unknown function (DUF827) -0.55 0.29 -0.31
77 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.55 0.32 -0.32
78 AT1G69660 TRAF-like family protein -0.55 0.34 -0.31
79 AT2G05290 transposable element gene -0.54 0.31 -0.34
80 AT2G33830 Dormancy/auxin associated family protein -0.54 0.3 -0.31
81 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 -0.54 0.33 -0.33
82 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.33 -0.32
83 AT1G68610 PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 -0.54 0.32 -0.32
84 AT2G07330 transposable element gene -0.54 0.32 -0.32
85 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 0.54 0.31 -0.32
86 AT2G13020 transposable element gene -0.54 0.33 -0.31
87 AT2G20110 Tesmin/TSO1-like CXC domain-containing protein -0.54 0.33 -0.32
88 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.54 0.31 -0.3
89 AT5G07430 Pectin lyase-like superfamily protein -0.54 0.32 -0.33
90 AT1G27040 Major facilitator superfamily protein 0.54 0.35 -0.33
91 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.54 0.34 -0.33
92 AT4G39400 Leucine-rich receptor-like protein kinase family protein ATBRI1, BR INSENSITIVE 1,
BRASSINOSTEROID INSENSITIVE 1,
CABBAGE 2, DWARF 2		 -0.53 0.33 -0.32
93 AT1G80330 gibberellin 3-oxidase 4 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 4, gibberellin 3-oxidase
4		 0.53 0.32 -0.3
94 AT5G58520 Protein kinase superfamily protein -0.53 0.33 -0.33
95 AT4G25590 actin depolymerizing factor 7 actin depolymerizing factor 7 0.53 0.3 -0.3
96 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 0.53 0.33 -0.34
97 AT2G19580 tetraspanin2 tetraspanin2 -0.53 0.32 -0.31
98 AT3G18670 Ankyrin repeat family protein -0.53 0.29 -0.3
99 AT1G73440 calmodulin-related 0.53 0.32 -0.34
100 AT5G57940 cyclic nucleotide gated channel 5 cyclic nucleotide gated channel 5,
cyclic nucleotide gated channel 5		 0.53 0.32 -0.31
101 AT4G29140 MATE efflux family protein ACTIVATED DISEASE SUSCEPTIBILITY 1 -0.53 0.3 -0.34
102 AT5G37560 RING/U-box superfamily protein 0.53 0.3 -0.3
103 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.53 0.31 -0.32
104 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.53 0.32 -0.3
105 AT3G28150 TRICHOME BIREFRINGENCE-LIKE 22 ALTERED XYLOGLUCAN 4-LIKE,
TRICHOME BIREFRINGENCE-LIKE 22		 -0.52 0.32 -0.33
106 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.52 0.31 -0.35
107 AT3G44440 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.3
108 AT5G52480 RNI-like superfamily protein -0.52 0.32 -0.31
109 AT1G46696 Protein of unknown function, DUF601 -0.52 0.29 -0.33
110 AT4G02690 Bax inhibitor-1 family protein -0.52 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.79 0.49 -0.45 C0136
112 C0230 Rutin - - polyphenol biosynthesis -0.65 0.47 -0.45
113 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.61 0.44 -0.45 C0012