AT2G39290 : phosphatidylglycerolphosphate synthase 1
Query Information
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AGICode AT2G39290
Description phosphatidylglycerolphosphate synthase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39290 phosphatidylglycerolphosphate synthase 1 phosphatidylglycerolphosphate
synthase 1,
PHOSPHATIDYLGLYCEROLPHOSPHATE
SYNTHASE 1, PGS1		 1 0.33 -0.33
2 AT1G69740 Aldolase superfamily protein HEMB1 0.88 0.3 -0.32
3 AT4G01690 Flavin containing amine oxidoreductase family HEMG1, PPO1, PPOX 0.88 0.3 -0.34
4 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 0.87 0.32 -0.31
5 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.87 0.3 -0.31
6 AT1G11430 plastid developmental protein DAG, putative 0.87 0.33 -0.32
7 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.86 0.34 -0.31
8 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.86 0.29 -0.32
9 AT3G08740 elongation factor P (EF-P) family protein 0.85 0.31 -0.31
10 AT2G22230 Thioesterase superfamily protein 0.85 0.33 -0.32
11 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.84 0.32 -0.3
12 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.84 0.31 -0.33
13 AT1G01090 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha 0.84 0.3 -0.31
14 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.84 0.34 -0.31
15 AT2G26900 Sodium Bile acid symporter family bile acid:sodium symporter family
protein 2		 0.83 0.32 -0.31
16 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2499 (InterPro:IPR019634);
Has 319 Blast hits to 317 proteins in 103 species: Archae -
0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).		 0.83 0.33 -0.3
17 AT2G38270 CAX-interacting protein 2 GLUTAREDOXIN, CAX-interacting
protein 2		 0.83 0.33 -0.31
18 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.83 0.32 -0.29
19 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.83 0.29 -0.29
20 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.83 0.29 -0.31
21 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.83 0.31 -0.3
22 AT5G13120 cyclophilin 20-2 ARABIDOPSIS THALIANA CYCLOPHILIN
20-2, cyclophilin 20-2,
Photosynthetic NDH subcomplex L 5		 0.82 0.3 -0.31
23 AT4G35450 ankyrin repeat-containing protein 2 AFT, ankyrin repeat-containing
protein 2, AKR2A		 0.82 0.31 -0.3
24 AT5G53860 embryo defective 2737 embryo defective 2737, EMBRYO
DEFECTIVE 64		 0.82 0.3 -0.29
25 AT3G15690 Single hybrid motif superfamily protein 0.82 0.31 -0.29
26 AT5G55620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.33 -0.31
27 AT2G22870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 embryo defective 2001 0.82 0.32 -0.31
28 AT1G16790 ribosomal protein-related 0.82 0.32 -0.33
29 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 0.82 0.33 -0.31
30 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.81 0.33 -0.28
31 AT3G52960 Thioredoxin superfamily protein 0.81 0.29 -0.32
32 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 0.81 0.3 -0.3
33 AT5G67070 ralf-like 34 ralf-like 34 0.8 0.33 -0.32
34 AT3G02600 lipid phosphate phosphatase 3 LIPID PHOSPHATE PHOSPHATASE 3,
lipid phosphate phosphatase 3		 0.8 0.32 -0.32
35 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.8 0.32 -0.3
36 AT3G06950 Pseudouridine synthase family protein 0.8 0.33 -0.3
37 AT1G24610 Rubisco methyltransferase family protein 0.8 0.31 -0.33
38 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.8 0.32 -0.29
39 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.8 0.32 -0.33
40 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.8 0.32 -0.32
41 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.79 0.32 -0.32
42 AT5G66055 ankyrin repeat protein ankyrin repeat protein, EMBRYO
DEFECTIVE 16, EMBRYO DEFECTIVE
2036		 0.79 0.34 -0.32
43 AT1G74960 fatty acid biosynthesis 1 ARABIDOPSIS BETA-KETOACYL-ACP
SYNTHETASE 2, fatty acid
biosynthesis 1, BETA-KETOACYL-ACP
SYNTHETASE 2		 0.79 0.31 -0.33
44 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.79 0.32 -0.3
45 AT3G49260 IQ-domain 21 IQ-domain 21 0.79 0.34 -0.31
46 AT1G20010 tubulin beta-5 chain tubulin beta-5 chain 0.79 0.3 -0.3
47 AT4G32900 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.79 0.32 -0.34
48 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.79 0.33 -0.32
49 AT1G30120 pyruvate dehydrogenase E1 beta pyruvate dehydrogenase E1 beta 0.79 0.31 -0.32
50 AT4G25370 Double Clp-N motif protein 0.79 0.3 -0.32
51 AT1G08640 Chloroplast J-like domain 1 Chloroplast J-like domain 1 0.79 0.32 -0.33
52 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase 0.78 0.33 -0.33
53 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.78 0.32 -0.33
54 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION 0.78 0.31 -0.34
55 AT4G33680 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 ABERRANT GROWTH AND DEATH 2 0.78 0.3 -0.31
56 AT2G40670 response regulator 16 response regulator 16, response
regulator 16		 0.78 0.3 -0.31
57 AT4G35950 RAC-like 6 RAC-like 6, ATRAC6, RHO-RELATED
PROTEIN FROM PLANTS 5, RAC-like 2,
RAC-like 6, ROP5		 0.78 0.31 -0.3
58 AT3G18870 Mitochondrial transcription termination factor family
protein		 0.78 0.3 -0.31
59 AT4G09730 RH39 RH39 0.78 0.32 -0.34
60 AT3G23710 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-III,
translocon at the inner envelope
membrane of chloroplasts 22-III		 0.78 0.32 -0.33
61 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.75 0.33 -0.3
62 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.75 0.34 -0.31
63 AT5G24600 Protein of unknown function, DUF599 -0.74 0.32 -0.32
64 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.74 0.33 -0.3
65 AT5G38030 MATE efflux family protein -0.72 0.3 -0.34
66 AT1G05577 Domain of unknown function (DUF966) -0.72 0.32 -0.34
67 AT5G49880 mitotic checkpoint family protein -0.71 0.3 -0.35
68 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.71 0.32 -0.32
69 AT3G21770 Peroxidase superfamily protein -0.71 0.31 -0.31
70 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.7 0.32 -0.31
71 AT1G66950 pleiotropic drug resistance 11 ATP-binding cassette G39,
PLEIOTROPIC DRUG RESISTANCE 11,
pleiotropic drug resistance 11		 -0.69 0.31 -0.32
72 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.69 0.32 -0.33
73 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.69 0.31 -0.31
74 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.68 0.3 -0.34
75 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.68 0.31 -0.32
76 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.68 0.3 -0.36
77 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.68 0.32 -0.31
78 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.68 0.3 -0.31
79 AT4G36740 homeobox protein 40 homeobox protein 40, HB-5,
homeobox protein 40		 -0.67 0.31 -0.33
80 AT3G26440 Protein of unknown function (DUF707) -0.67 0.3 -0.32
81 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.67 0.31 -0.32
82 AT1G24430 HXXXD-type acyl-transferase family protein -0.67 0.3 -0.32
83 AT5G14130 Peroxidase superfamily protein -0.66 0.31 -0.32
84 AT2G03200 Eukaryotic aspartyl protease family protein -0.65 0.34 -0.32
85 AT5G53890 phytosylfokine-alpha receptor 2 AtPSKR2, phytosylfokine-alpha
receptor 2		 -0.64 0.3 -0.34
86 AT5G49350 Glycine-rich protein family -0.64 0.32 -0.33
87 AT3G21420 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 LATERAL BRANCHING OXIDOREDUCTASE 1 -0.64 0.3 -0.31
88 AT5G65210 bZIP transcription factor family protein TGA1 -0.63 0.3 -0.33
89 AT1G78780 pathogenesis-related family protein -0.63 0.32 -0.33
90 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58		 -0.63 0.31 -0.29
91 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19		 -0.63 0.31 -0.32
92 AT5G09480 hydroxyproline-rich glycoprotein family protein -0.63 0.3 -0.31
93 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.63 0.3 -0.3
94 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.3 -0.31
95 AT2G25520 Drug/metabolite transporter superfamily protein -0.63 0.31 -0.33
96 AT5G60890 myb domain protein 34 ATMYB34, ALTERED TRYPTOPHAN
REGULATION 1, myb domain protein
34		 -0.63 0.32 -0.32
97 AT2G31990 Exostosin family protein -0.63 0.33 -0.33
98 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.62 0.32 -0.29
99 AT5G05340 Peroxidase superfamily protein -0.62 0.31 -0.29
100 AT3G13100 multidrug resistance-associated protein 7 ATP-binding cassette C7, multidrug
resistance-associated protein 7,
MRP7, multidrug
resistance-associated protein 7		 -0.62 0.3 -0.33
101 AT1G03840 C2H2 and C2HC zinc fingers superfamily protein Magpie -0.62 0.33 -0.29
102 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.31 -0.31
103 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.62 0.32 -0.31
104 AT3G55090 ABC-2 type transporter family protein ATP-binding cassette G16 -0.61 0.3 -0.31
105 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 -0.61 0.3 -0.3
106 AT3G20960 cytochrome P450, family 705, subfamily A, polypeptide 33 cytochrome P450, family 705,
subfamily A, polypeptide 33		 -0.61 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.69 0.46 -0.43 C0107