AT2G39260 : -
Query Information
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AGICode AT2G39260
Description binding;RNA binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39260 binding;RNA binding 1 0.32 -0.29
2 AT5G23720 dual specificity protein phosphatase family protein PROPYZAMIDE-HYPERSENSITIVE 1 0.72 0.31 -0.35
3 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 0.7 0.33 -0.32
4 AT4G25950 vacuolar ATP synthase G3 vacuolar ATP synthase G3 0.69 0.32 -0.32
5 AT5G55040 DNA-binding bromodomain-containing protein 0.68 0.32 -0.32
6 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.68 0.32 -0.31
7 AT4G20300 Protein of unknown function (DUF1639) 0.66 0.33 -0.31
8 AT5G24710 Transducin/WD40 repeat-like superfamily protein 0.66 0.31 -0.31
9 AT2G30110 ubiquitin-activating enzyme 1 ubiquitin-activating enzyme 1,
MODIFIER OF SNC1 5,
ubiquitin-activating enzyme 1		 0.66 0.32 -0.31
10 AT4G02610 Aldolase-type TIM barrel family protein -0.64 0.3 -0.32
11 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 0.64 0.31 -0.32
12 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.64 0.31 -0.34
13 AT3G43700 BTB-POZ and MATH domain 6 BTB-POZ AND MATH DOMAIN 6, BTB-POZ
and MATH domain 6		 -0.64 0.3 -0.33
14 AT5G56880 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.33 -0.32
15 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.63 0.3 -0.31
16 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.63 0.33 -0.32
17 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.62 0.3 -0.3
18 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.33
19 AT1G52320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF632
(InterPro:IPR006867); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF630 and DUF632)
(TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in
62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi -
2; Plants - 427; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.62 0.31 -0.32
20 AT1G56560 Plant neutral invertase family protein alkaline/neutral invertase A 0.62 0.34 -0.29
21 AT5G12350 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.62 0.3 -0.32
22 AT5G59410 Rab5-interacting family protein -0.62 0.3 -0.33
23 AT5G01470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.33 -0.33
24 AT4G23730 Galactose mutarotase-like superfamily protein -0.62 0.31 -0.33
25 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.61 0.32 -0.31
26 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 0.61 0.3 -0.32
27 AT5G05990 Mitochondrial glycoprotein family protein -0.61 0.32 -0.31
28 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 0.6 0.32 -0.3
29 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.6 0.32 -0.32
30 AT3G45110 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.31 -0.32
31 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.59 0.32 -0.3
32 AT1G65440 global transcription factor group B1 global transcription factor group
B1		 0.59 0.31 -0.32
33 AT4G18860 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.29
34 AT2G35480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast
hits to 47 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.3 -0.31
35 AT5G63320 nuclear protein X1 nuclear protein X1 0.58 0.32 -0.31
36 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.58 0.33 -0.34
37 AT5G15680 ARM repeat superfamily protein 0.57 0.33 -0.3
38 AT3G54230 suppressor of abi3-5 suppressor of abi3-5 0.57 0.32 -0.33
39 AT3G01780 ARM repeat superfamily protein TPLATE 0.57 0.34 -0.33
40 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 0.56 0.32 -0.3
41 AT5G55130 co-factor for nitrate, reductase and xanthine dehydrogenase
5		 co-factor for nitrate, reductase
and xanthine dehydrogenase 5,
SIRTINOL RESISTANT 1		 -0.56 0.3 -0.32
42 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.55 0.32 -0.32
43 AT3G01090 SNF1 kinase homolog 10 SNF1 kinase homolog 10, KIN10,
SNF1 kinase homolog 10,
SNF1-RELATED PROTEIN KINASE 1.1		 0.55 0.32 -0.32
44 AT4G14570 acylaminoacyl-peptidase-related acylamino acid-releasing enzyme,
AtAARE		 -0.55 0.31 -0.33
45 AT4G11180 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.55 0.32 -0.33
46 AT1G41770 transposable element gene 0.55 0.31 -0.29
47 AT3G09870 SAUR-like auxin-responsive protein family -0.55 0.3 -0.31
48 AT5G17150 Cystatin/monellin superfamily protein -0.55 0.3 -0.32
49 AT3G26400 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation
factor 4B1		 0.55 0.32 -0.32
50 AT3G09700 Chaperone DnaJ-domain superfamily protein -0.55 0.32 -0.31
51 AT3G60860 SEC7-like guanine nucleotide exchange family protein 0.55 0.31 -0.3
52 AT3G23460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.54 0.33 -0.33
53 AT2G28355 low-molecular-weight cysteine-rich 5 low-molecular-weight cysteine-rich
5		 -0.53 0.31 -0.3
54 AT3G56830 Protein of unknown function (DUF565) -0.53 0.32 -0.32
55 AT2G13750 transposable element gene -0.52 0.32 -0.32
56 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.52 0.32 -0.31
57 AT5G59270 Concanavalin A-like lectin protein kinase family protein -0.52 0.31 -0.32
58 AT3G49640 Aldolase-type TIM barrel family protein -0.52 0.31 -0.33
59 AT1G01930 zinc finger protein-related -0.52 0.31 -0.31
60 AT3G50060 myb domain protein 77 myb domain protein 77 -0.52 0.3 -0.31
61 AT4G24210 F-box family protein SLEEPY1 -0.52 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0074 Cystine L-Cystine L-Cystine protein precursor 0.73 0.44 -0.45 C0074