AT2G38420 : -
Query Information
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AGICode AT2G38420
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.32
2 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.78 0.32 -0.32
3 AT1G71000 Chaperone DnaJ-domain superfamily protein 0.74 0.3 -0.3
4 AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.33
5 AT2G20510 translocase inner membrane subunit 44-1 translocase inner membrane subunit
44-1, translocase inner membrane
subunit 44-1		 -0.73 0.3 -0.31
6 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.72 0.31 -0.32
7 AT4G31830 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.31 -0.31
8 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.33 -0.32
9 AT1G10900 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.7 0.31 -0.31
10 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 -0.7 0.32 -0.31
11 AT1G72760 Protein kinase superfamily protein 0.69 0.31 -0.31
12 AT4G37840 hexokinase-like 3 hexokinase-like 3 -0.69 0.32 -0.31
13 AT1G10350 DNAJ heat shock family protein 0.69 0.32 -0.31
14 AT5G38820 Transmembrane amino acid transporter family protein -0.69 0.32 -0.32
15 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.69 0.3 -0.31
16 AT3G24280 small acidic protein 2 small acidic protein 2 -0.68 0.32 -0.3
17 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.68 0.32 -0.3
18 AT3G30650 transposable element gene -0.68 0.31 -0.33
19 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 0.68 0.32 -0.33
20 AT4G32780 phosphoinositide binding -0.67 0.29 -0.31
21 AT1G50630 Protein of unknown function (DUF3537) 0.67 0.3 -0.29
22 AT4G37950 Rhamnogalacturonate lyase family protein -0.67 0.31 -0.33
23 AT1G33320 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.67 0.3 -0.31
24 AT5G39720 avirulence induced gene 2 like protein avirulence induced gene 2 like
protein		 0.67 0.3 -0.32
25 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.29 -0.31
26 AT3G48070 RING/U-box superfamily protein 0.66 0.32 -0.32
27 AT2G26620 Pectin lyase-like superfamily protein 0.66 0.32 -0.31
28 AT1G24620 EF hand calcium-binding protein family -0.66 0.31 -0.29
29 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.66 0.32 -0.29
30 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.31 -0.31
31 AT5G06265 hyaluronan mediated motility receptor-related -0.66 0.33 -0.32
32 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor 0.65 0.31 -0.32
33 AT1G42480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF3456
(InterPro:IPR021852); Has 177 Blast hits to 177 proteins in
59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi
- 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 -0.65 0.29 -0.31
34 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 0.65 0.32 -0.32
35 AT1G54955 transposable element gene 0.65 0.31 -0.3
36 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.65 0.31 -0.33
37 AT5G66240 Transducin/WD40 repeat-like superfamily protein -0.65 0.32 -0.3
38 AT1G18340 basal transcription factor complex subunit-related -0.65 0.31 -0.3
39 AT1G76180 Dehydrin family protein EARLY RESPONSE TO DEHYDRATION 14 0.64 0.31 -0.3
40 AT3G62230 F-box family protein DUO1-activated F-box 1 0.64 0.33 -0.32
41 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.33 -0.32
42 AT1G80110 phloem protein 2-B11 phloem protein 2-B11, phloem
protein 2-B11		 0.64 0.3 -0.32
43 AT5G18160 F-box and associated interaction domains-containing protein 0.64 0.3 -0.33
44 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 -0.64 0.32 -0.33
45 AT2G12610 transposable element gene 0.64 0.31 -0.31
46 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.64 0.32 -0.3
47 AT1G71692 AGAMOUS-like 12 AGAMOUS-like 12, XAANTAL1 -0.64 0.33 -0.31
48 AT4G23110 insulin-like growth factor binding -0.63 0.32 -0.33
49 AT4G40010 SNF1-related protein kinase 2.7 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-7, SNF1-related
protein kinase 2.7, SRK2F		 0.63 0.3 -0.32
50 AT3G42290 transposable element gene 0.63 0.31 -0.29
51 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.3
52 AT1G21120 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 2		 0.63 0.31 -0.3
53 AT1G18610 Galactose oxidase/kelch repeat superfamily protein -0.63 0.32 -0.29
54 AT1G52360 Coatomer, beta' subunit -0.63 0.33 -0.33
55 AT2G40316 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 27
(InterPro:IPR018939); Has 138 Blast hits to 138 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi -
62; Plants - 33; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.63 0.31 -0.32
56 AT5G46010 Homeodomain-like superfamily protein 0.63 0.3 -0.29
57 AT2G14040 transposable element gene -0.63 0.3 -0.33
58 AT3G54940 Papain family cysteine protease 0.63 0.33 -0.33
59 AT3G51200 SAUR-like auxin-responsive protein family -0.63 0.32 -0.31
60 AT5G39420 CDC2C CDC2C 0.63 0.34 -0.3
61 AT1G77820 transposable element gene -0.62 0.32 -0.28
62 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.62 0.34 -0.3
63 AT4G11590 F-box associated ubiquitination effector family protein -0.62 0.31 -0.34
64 AT4G30120 heavy metal atpase 3 A. THALIANA HEAVY METAL ATPASE 3,
heavy metal atpase 3		 0.62 0.3 -0.3
65 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.29 -0.3
66 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.32
67 AT5G42000 ORMDL family protein 0.62 0.29 -0.3
68 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein 0.62 0.33 -0.33
69 AT3G50980 dehydrin xero 1 dehydrin xero 1 0.62 0.29 -0.31
70 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.34 -0.31
71 AT3G16120 Dynein light chain type 1 family protein 0.62 0.32 -0.31
72 AT2G34850 NAD(P)-binding Rossmann-fold superfamily protein maternal effect embryo arrest 25 0.62 0.29 -0.33
73 AT4G12930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal, male
gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G28930.1); Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.31
74 AT5G35150 transposable element gene -0.62 0.31 -0.31
75 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.61 0.35 -0.32
76 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 -0.61 0.32 -0.3
77 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 0.61 0.32 -0.32
78 AT4G37220 Cold acclimation protein WCOR413 family 0.61 0.3 -0.33
79 AT4G08880 transposable element gene -0.61 0.3 -0.31
80 AT1G43760 DNAse I-like superfamily protein -0.61 0.32 -0.32
81 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.61 0.32 -0.31
82 AT2G40935 PLAC8 family protein 0.61 0.31 -0.31
83 AT2G01390 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3111 -0.61 0.32 -0.33
84 AT1G45545 Plant protein of unknown function (DUF827) -0.61 0.3 -0.32
85 AT2G11210 transposable element gene 0.6 0.3 -0.33
86 AT2G15660 AGAMOUS-like 95 AGAMOUS-like 95 -0.6 0.3 -0.31
87 AT5G48390 Tetratricopeptide repeat (TPR)-like superfamily protein ATZIP4 0.6 0.33 -0.31
88 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.3 -0.32
89 AT3G42330 transposable element gene -0.6 0.32 -0.31
90 AT1G35530 DEAD/DEAH box RNA helicase family protein 0.6 0.3 -0.32
91 AT2G05870 transposable element gene -0.6 0.31 -0.35
92 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 -0.6 0.31 -0.31
93 AT3G07840 Pectin lyase-like superfamily protein -0.6 0.31 -0.29
94 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.6 0.33 -0.31
95 AT4G07840 transposable element gene -0.6 0.32 -0.32
96 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.6 0.31 -0.31
97 AT1G01460 Phosphatidylinositol-4-phosphate 5-kinase, core ATPIPK11, PIPK11 0.6 0.3 -0.31
98 AT2G35390 Phosphoribosyltransferase family protein -0.6 0.33 -0.33
99 AT3G45940 Glycosyl hydrolases family 31 protein -0.59 0.32 -0.32
100 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.31 -0.31
101 AT2G36700 Pectin lyase-like superfamily protein -0.59 0.33 -0.3
102 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 0.59 0.3 -0.31
103 AT5G04030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: egg cell; Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.29 -0.31
104 AT1G35150 General transcription factor 2-related zinc finger protein 0.59 0.3 -0.33
105 AT2G03840 tetraspanin13 tetraspanin13 0.59 0.32 -0.32
106 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.59 0.31 -0.31
107 AT5G37900 TRAF-like superfamily protein 0.59 0.32 -0.31
108 AT2G19510 LOB domain-containing protein 8 LOB domain-containing protein 8 0.59 0.31 -0.33
109 AT2G42250 cytochrome P450, family 712, subfamily A, polypeptide 1 cytochrome P450, family 712,
subfamily A, polypeptide 1		 -0.59 0.32 -0.31
110 AT2G44470 beta glucosidase 29 beta glucosidase 29 -0.59 0.3 -0.32
111 AT2G03410 Mo25 family protein 0.59 0.31 -0.32
112 AT3G42980 transposable element gene 0.59 0.32 -0.31
113 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 0.59 0.31 -0.31
114 AT1G37537 transposable element gene -0.59 0.31 -0.31
115 AT1G07690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s:
Orthoreovirus membrane fusion p10 (InterPro:IPR009854);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G54950.1); Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.59 0.3 -0.32
116 AT1G32050 SCAMP family protein -0.58 0.33 -0.32
117 AT2G38890 unknown protein; Has 58 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.58 0.32 -0.32
118 AT3G49400 Transducin/WD40 repeat-like superfamily protein -0.58 0.34 -0.32
119 AT4G18090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.35 -0.29
120 AT3G44700 Plant protein of unknown function -0.58 0.33 -0.32
121 AT3G44510 alpha/beta-Hydrolases superfamily protein -0.58 0.3 -0.31
122 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.58 0.31 -0.32
123 AT2G12520 transposable element gene 0.58 0.3 -0.33
124 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.58 0.31 -0.3
125 AT2G47020 Peptide chain release factor 1 -0.58 0.31 -0.33
126 AT2G35670 VEFS-Box of polycomb protein FERTILIZATION-INDEPENDENT
ENDOSPERM 2, FERTILIZATION
INDEPENDENT SEED 2		 -0.58 0.35 -0.31
127 AT1G50080 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.33
128 AT5G40980 Protein of unknown function (DUF 3339) -0.58 0.3 -0.32
129 AT3G47740 ABC2 homolog 2 ATP-binding cassette A3, A.
THALIANA ABC2 HOMOLOG 2, ABC2
homolog 2		 -0.58 0.29 -0.31
130 AT2G10400 transposable element gene 0.58 0.3 -0.3
131 AT4G11720 hapless 2 GENERATIVE CELL-SPECIFIC 1,
HAPLESS 2		 0.58 0.32 -0.3
132 AT5G27200 acyl carrier protein 5 acyl carrier protein 5 -0.58 0.31 -0.31
133 AT4G13760 Pectin lyase-like superfamily protein -0.58 0.31 -0.33
134 AT3G12890 activator of spomin::LUC2 activator of spomin::LUC2 -0.57 0.31 -0.32
135 AT3G42100 transposable element gene -0.57 0.33 -0.3
136 AT1G07025 Mitochondrial substrate carrier family protein -0.57 0.31 -0.31
137 AT3G45670 Protein kinase superfamily protein -0.57 0.32 -0.32
138 AT1G45180 RING/U-box superfamily protein -0.57 0.3 -0.33
139 AT3G31300 transposable element gene -0.57 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0230 Rutin - - polyphenol biosynthesis 0.58 0.43 -0.45