AGICode | AT2G38080 |
Description | Laccase/Diphenol oxidase family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G38080 | Laccase/Diphenol oxidase family protein | ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRREGULAR XYLEM 12, LACCASE 4, LACCASE-LIKE MULTICOPPER OXIDASE 4 |
1 | 0.3 | -0.3 | ||
2 | AT5G60020 | laccase 17 | ATLAC17, laccase 17 | 0.81 | 0.31 | -0.31 | ||
3 | AT5G17420 | Cellulose synthase family protein | ATCESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRREGULAR XYLEM 3, MURUS 10 |
0.73 | 0.3 | -0.33 | ||
4 | AT5G10290 | leucine-rich repeat transmembrane protein kinase family protein |
-0.69 | 0.3 | -0.31 | |||
5 | AT4G12700 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
0.68 | 0.3 | -0.3 | |||
6 | AT2G28570 | unknown protein; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.32 | -0.31 | |||
7 | AT3G09970 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.68 | 0.34 | -0.33 | |||
8 | AT3G24660 | transmembrane kinase-like 1 | transmembrane kinase-like 1 | 0.68 | 0.34 | -0.3 | ||
9 | AT5G64080 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
AtXYP1, xylogen protein 1 | 0.68 | 0.28 | -0.3 | ||
10 | AT2G32520 | alpha/beta-Hydrolases superfamily protein | -0.66 | 0.32 | -0.31 | |||
11 | AT1G72310 | RING/U-box superfamily protein | ATL3 | 0.66 | 0.31 | -0.32 | ||
12 | AT4G35350 | xylem cysteine peptidase 1 | xylem cysteine peptidase 1 | 0.66 | 0.3 | -0.33 | ||
13 | AT3G10340 | phenylalanine ammonia-lyase 4 | phenylalanine ammonia-lyase 4 | 0.66 | 0.32 | -0.32 | ||
14 | AT4G18780 | cellulose synthase family protein | CELLULOSE SYNTHASE 8, CELLULOSE SYNTHASE 8, IRREGULAR XYLEM 1, LEAF WILTING 2 |
0.66 | 0.32 | -0.32 | ||
15 | AT3G19370 | Plant protein of unknown function (DUF869) | 0.65 | 0.31 | -0.3 | |||
16 | AT5G03260 | laccase 11 | laccase 11 | 0.65 | 0.32 | -0.35 | ||
17 | AT3G27200 | Cupredoxin superfamily protein | 0.65 | 0.29 | -0.32 | |||
18 | AT2G26450 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.64 | 0.32 | -0.3 | |||
19 | AT4G17070 | peptidyl-prolyl cis-trans isomerases | -0.64 | 0.3 | -0.3 | |||
20 | AT1G19380 | Protein of unknown function (DUF1195) | -0.64 | 0.32 | -0.33 | |||
21 | AT3G20015 | Eukaryotic aspartyl protease family protein | 0.64 | 0.31 | -0.33 | |||
22 | AT1G06700 | Protein kinase superfamily protein | -0.64 | 0.31 | -0.31 | |||
23 | AT5G66560 | Phototropic-responsive NPH3 family protein | 0.64 | 0.33 | -0.32 | |||
24 | AT3G52340 | sucrose-6F-phosphate phosphohydrolase 2 | SUCROSE-PHOSPHATASE 2, sucrose-6F-phosphate phosphohydrolase 2 |
-0.63 | 0.32 | -0.31 | ||
25 | AT5G49580 | Chaperone DnaJ-domain superfamily protein | -0.63 | 0.31 | -0.32 | |||
26 | AT3G62020 | germin-like protein 10 | germin-like protein 10 | 0.63 | 0.32 | -0.3 | ||
27 | AT2G20750 | expansin B1 | expansin B1, ATHEXP BETA 1.5, expansin B1 |
0.63 | 0.33 | -0.32 | ||
28 | AT4G32880 | homeobox gene 8 | homeobox gene 8, ATHB8, homeobox gene 8 |
0.62 | 0.29 | -0.32 | ||
29 | AT2G12400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.62 | 0.32 | -0.32 | |||
30 | AT1G35320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to 9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.33 | -0.32 | |||
31 | AT4G21400 | cysteine-rich RLK (RECEPTOR-like protein kinase) 28 | cysteine-rich RLK (RECEPTOR-like protein kinase) 28 |
-0.61 | 0.31 | -0.33 | ||
32 | AT2G28760 | UDP-XYL synthase 6 | UDP-XYL synthase 6 | 0.61 | 0.32 | -0.32 | ||
33 | AT3G61630 | cytokinin response factor 6 | cytokinin response factor 6 | -0.61 | 0.33 | -0.33 | ||
34 | AT2G04630 | RNA polymerase Rpb6 | NRPB6B, NRPE6B | -0.6 | 0.34 | -0.31 | ||
35 | AT1G80370 | Cyclin A2;4 | Cyclin A2;4 | 0.6 | 0.31 | -0.31 | ||
36 | AT5G02640 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.3 | -0.34 | |||
37 | AT5G23750 | Remorin family protein | 0.6 | 0.31 | -0.32 | |||
38 | AT3G54250 | GHMP kinase family protein | 0.6 | 0.29 | -0.34 | |||
39 | AT3G25110 | fatA acyl-ACP thioesterase | fatA acyl-ACP thioesterase, fatA acyl-ACP thioesterase |
0.6 | 0.32 | -0.3 | ||
40 | AT5G44670 | Domain of unknown function (DUF23) | 0.6 | 0.29 | -0.3 | |||
41 | AT5G53550 | YELLOW STRIPE like 3 | YELLOW STRIPE LIKE 3, YELLOW STRIPE like 3 |
-0.6 | 0.32 | -0.31 | ||
42 | AT4G26540 | Leucine-rich repeat receptor-like protein kinase family protein |
0.6 | 0.34 | -0.31 | |||
43 | AT1G05020 | ENTH/ANTH/VHS superfamily protein | -0.59 | 0.31 | -0.31 | |||
44 | AT5G58520 | Protein kinase superfamily protein | 0.59 | 0.29 | -0.31 | |||
45 | AT5G03730 | Protein kinase superfamily protein | AtCTR1, CONSTITUTIVE TRIPLE RESPONSE 1, SUGAR-INSENSITIVE 1 |
-0.59 | 0.31 | -0.3 | ||
46 | AT2G37090 | Nucleotide-diphospho-sugar transferases superfamily protein | IRREGULAR XYLEM 9 | 0.59 | 0.3 | -0.3 | ||
47 | AT3G08000 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.59 | 0.33 | -0.31 | |||
48 | AT5G64890 | elicitor peptide 2 precursor | elicitor peptide 2 precursor | -0.59 | 0.29 | -0.31 | ||
49 | ATMG01370 | hypothetical protein | ORF111D | -0.58 | 0.33 | -0.31 | ||
50 | AT5G15680 | ARM repeat superfamily protein | 0.58 | 0.34 | -0.33 | |||
51 | AT4G12910 | serine carboxypeptidase-like 20 | serine carboxypeptidase-like 20 | 0.58 | 0.32 | -0.34 | ||
52 | AT5G54690 | galacturonosyltransferase 12 | galacturonosyltransferase 12, IRREGULAR XYLEM 8, LGT6 |
0.58 | 0.32 | -0.31 | ||
53 | AT1G08500 | early nodulin-like protein 18 | AtENODL18, early nodulin-like protein 18 |
0.58 | 0.32 | -0.3 | ||
54 | AT5G13900 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.58 | 0.32 | -0.3 | |||
55 | AT2G42280 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.58 | 0.3 | -0.3 | |||
56 | AT1G06160 | octadecanoid-responsive Arabidopsis AP2/ERF 59 | octadecanoid-responsive Arabidopsis AP2/ERF 59 |
-0.57 | 0.32 | -0.31 | ||
57 | AT5G44030 | cellulose synthase A4 | cellulose synthase A4, IRREGULAR XYLEM 5, NWS2 |
0.57 | 0.31 | -0.32 | ||
58 | AT1G15940 | Tudor/PWWP/MBT superfamily protein | 0.57 | 0.3 | -0.33 | |||
59 | AT3G60200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.57 | 0.3 | -0.33 | |||
60 | AT2G18250 | 4-phosphopantetheine adenylyltransferase | 4-phosphopantetheine adenylyltransferase, 4-phosphopantetheine adenylyltransferase |
-0.56 | 0.32 | -0.34 | ||
61 | AT1G45130 | beta-galactosidase 5 | beta-galactosidase 5 | 0.56 | 0.33 | -0.32 | ||
62 | AT1G31470 | Major facilitator superfamily protein | NUCLEAR FUSION DEFECTIVE 4 | 0.56 | 0.3 | -0.31 | ||
63 | AT5G16570 | glutamine synthetase 1;4 | glutamine synthetase 1;4 | 0.56 | 0.31 | -0.3 | ||
64 | AT2G29340 | NAD-dependent epimerase/dehydratase family protein | -0.56 | 0.31 | -0.32 | |||
65 | AT1G28240 | Protein of unknown function (DUF616) | -0.56 | 0.33 | -0.33 | |||
66 | AT3G10960 | AZA-guanine resistant1 | AZA-guanine resistant1, AZA-guanine resistant1 |
0.56 | 0.3 | -0.3 | ||
67 | AT1G71930 | vascular related NAC-domain protein 7 | Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 |
0.56 | 0.32 | -0.33 | ||
68 | AT3G16920 | chitinase-like protein 2 | ATCTL2, chitinase-like protein 2 | 0.56 | 0.34 | -0.31 | ||
69 | AT3G11290 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.56 | 0.33 | -0.3 | |||
70 | AT1G07390 | receptor like protein 1 | receptor like protein 1, receptor like protein 1 |
-0.56 | 0.32 | -0.33 | ||
71 | AT2G41230 | unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
ORGAN SIZE RELATED 1 | -0.55 | 0.33 | -0.32 | ||
72 | AT3G12730 | Homeodomain-like superfamily protein | -0.55 | 0.32 | -0.3 | |||
73 | AT5G46450 | Disease resistance protein (TIR-NBS-LRR class) family | -0.55 | 0.33 | -0.32 | |||
74 | AT5G04850 | SNF7 family protein | VPS60.2 | -0.55 | 0.32 | -0.3 | ||
75 | AT5G04000 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.55 | 0.31 | -0.32 | |||
76 | AT5G12170 | CRT (chloroquine-resistance transporter)-like transporter 3 | CRT (chloroquine-resistance transporter)-like transporter 3 |
-0.55 | 0.28 | -0.32 | ||
77 | AT5G16600 | myb domain protein 43 | myb domain protein 43, myb domain protein 43 |
0.55 | 0.3 | -0.32 | ||
78 | AT4G18425 | Protein of unknown function (DUF679) | 0.55 | 0.33 | -0.33 | |||
79 | AT5G12170 | CRT (chloroquine-resistance transporter)-like transporter 3 | CRT (chloroquine-resistance transporter)-like transporter 3 |
-0.54 | 0.3 | -0.32 | ||
80 | AT1G30440 | Phototropic-responsive NPH3 family protein | 0.54 | 0.32 | -0.3 | |||
81 | AT5G10850 | transposable element gene | 0.54 | 0.34 | -0.31 | |||
82 | AT4G33330 | plant glycogenin-like starch initiation protein 3 | glucuronic acid substitution of xylan 2, plant glycogenin-like starch initiation protein 3 |
0.54 | 0.34 | -0.32 | ||
83 | AT2G31810 | ACT domain-containing small subunit of acetolactate synthase protein |
-0.54 | 0.31 | -0.33 | |||
84 | AT1G74420 | fucosyltransferase 3 | ATFUT3, fucosyltransferase 3 | 0.53 | 0.31 | -0.31 | ||
85 | AT4G21310 | Protein of unknown function (DUF1218) | -0.53 | 0.3 | -0.29 | |||
86 | AT2G25780 | Protein of unknown function (DUF1677) | -0.53 | 0.31 | -0.33 | |||
87 | AT1G76250 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.53 | 0.31 | -0.32 | |||
88 | AT1G72140 | Major facilitator superfamily protein | 0.53 | 0.32 | -0.31 | |||
89 | AT5G07830 | glucuronidase 2 | glucuronidase 2, glucuronidase 2 | -0.52 | 0.3 | -0.32 | ||
90 | AT5G43200 | Zinc finger, C3HC4 type (RING finger) family protein | -0.52 | 0.32 | -0.33 | |||
91 | AT5G25270 | Ubiquitin-like superfamily protein | -0.52 | 0.34 | -0.31 | |||
92 | AT2G21060 | glycine-rich protein 2B | COLD SHOCK DOMAIN PROTEIN 4, glycine-rich protein 2B, glycine-rich protein 2B |
0.52 | 0.3 | -0.32 | ||
93 | AT3G46280 | protein kinase-related | -0.52 | 0.31 | -0.29 | |||
94 | AT5G63950 | chromatin remodeling 24 | chromatin remodeling 24 | 0.52 | 0.32 | -0.33 | ||
95 | AT1G30860 | RING/U-box superfamily protein | 0.52 | 0.32 | -0.33 | |||
96 | AT4G31890 | ARM repeat superfamily protein | 0.52 | 0.34 | -0.31 | |||
97 | AT1G04500 | CCT motif family protein | -0.51 | 0.34 | -0.34 | |||
98 | AT5G01890 | Leucine-rich receptor-like protein kinase family protein | 0.51 | 0.28 | -0.31 | |||
99 | AT2G22360 | DNAJ heat shock family protein | -0.51 | 0.3 | -0.31 | |||
100 | AT4G02380 | senescence-associated gene 21 | Arabidopsis thaliana late embryogenensis abundant like 5, senescence-associated gene 21 |
-0.51 | 0.32 | -0.33 | ||
101 | AT5G52290 | shortage in chiasmata 1 | SHORTAGE IN CHIASMATA 1 | 0.51 | 0.32 | -0.3 | ||
102 | AT3G49640 | Aldolase-type TIM barrel family protein | -0.51 | 0.32 | -0.29 | |||
103 | AT5G41820 | RAB geranylgeranyl transferase alpha subunit 2 | RAB geranylgeranyl transferase alpha subunit 2, RAB geranylgeranyl transferase alpha subunit 2 |
-0.51 | 0.31 | -0.31 | ||
104 | AT1G73820 | Ssu72-like family protein | -0.51 | 0.31 | -0.31 | |||
105 | AT5G20990 | molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) |
B73, CHLORATE RESISTANT 6, CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE, CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 1, SIRTINOL 4 |
-0.51 | 0.33 | -0.29 | ||
106 | AT3G43950 | Protein kinase superfamily protein | -0.51 | 0.32 | -0.32 | |||
107 | AT3G48990 | AMP-dependent synthetase and ligase family protein | -0.5 | 0.31 | -0.33 | |||
108 | AT3G26270 | cytochrome P450, family 71, subfamily B, polypeptide 25 | cytochrome P450, family 71, subfamily B, polypeptide 25 |
-0.5 | 0.28 | -0.32 | ||
109 | AT1G02475 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.5 | 0.35 | -0.31 | |||
110 | AT3G51330 | Eukaryotic aspartyl protease family protein | -0.5 | 0.32 | -0.33 | |||
111 | AT1G04985 | unknown protein; Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.3 | -0.32 | |||
112 | AT1G21320 | nucleotide binding;nucleic acid binding | -0.5 | 0.28 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0161 | MST_1566.3 | - | - | - | -0.72 | 0.46 | -0.47 | ||
114 | C0163 | MST_1589.2 | - | - | - | -0.71 | 0.44 | -0.49 | ||
115 | C0164 | MST_1596.8 | - | - | - | -0.71 | 0.46 | -0.45 | ||
116 | C0160 | MST_1509.5 | - | - | - | -0.7 | 0.45 | -0.46 | ||
117 | C0165 | MST_1688.6 | - | - | - | -0.68 | 0.43 | -0.45 | ||
118 | C0240 | Stigmasterol | - | Stigmasterol | plant sterol biosynthesis | 0.68 | 0.43 | -0.46 | ||
119 | C0060 | Asparagine | D,L-Asparagine | L-Asparagine | asparagine degradation I, asparagine biosynthesis III (tRNA-dependent), asparagine biosynthesis I, tRNA charging, cyanide detoxification II |
-0.5 | 0.33 | -0.34 |