AT2G41500 : EMB2776
Query Information
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AGICode AT2G41500
Description WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS 1 0.3 -0.32
2 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.77 0.31 -0.33
3 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 0.75 0.3 -0.32
4 AT2G36930 zinc finger (C2H2 type) family protein 0.74 0.32 -0.3
5 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 0.73 0.3 -0.31
6 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT 0.7 0.32 -0.32
7 AT1G30080 Glycosyl hydrolase superfamily protein 0.7 0.33 -0.3
8 AT3G28840 Protein of unknown function (DUF1216) -0.7 0.31 -0.31
9 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.32 -0.32
10 AT4G21600 endonuclease 5 endonuclease 5 0.69 0.34 -0.34
11 AT1G18980 RmlC-like cupins superfamily protein 0.69 0.3 -0.29
12 AT5G01160 RING/U-box superfamily protein 0.69 0.33 -0.29
13 AT1G77690 like AUX1 3 like AUX1 3 0.69 0.29 -0.31
14 AT5G51590 AT hook motif DNA-binding family protein 0.69 0.31 -0.31
15 AT2G02160 CCCH-type zinc finger family protein 0.69 0.31 -0.32
16 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.69 0.33 -0.32
17 AT2G19310 HSP20-like chaperones superfamily protein -0.68 0.31 -0.33
18 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.33 -0.3
19 AT2G28450 zinc finger (CCCH-type) family protein 0.68 0.32 -0.32
20 AT1G01630 Sec14p-like phosphatidylinositol transfer family protein -0.68 0.3 -0.31
21 AT4G00080 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 unfertilized embryo sac 11 0.68 0.3 -0.33
22 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B 0.67 0.32 -0.33
23 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.67 0.33 -0.32
24 AT3G50850 Putative methyltransferase family protein 0.67 0.31 -0.34
25 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 0.67 0.3 -0.34
26 AT5G14750 myb domain protein 66 myb domain protein 66, myb domain
protein 66, WEREWOLF, WEREWOLF 1		 0.66 0.33 -0.31
27 AT2G36290 alpha/beta-Hydrolases superfamily protein 0.66 0.3 -0.31
28 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.66 0.32 -0.3
29 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.66 0.33 -0.32
30 AT4G31330 Protein of unknown function, DUF599 -0.66 0.3 -0.36
31 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.31 -0.3
32 AT5G15860 prenylcysteine methylesterase prenylcysteine methylesterase,
Isoprenylcysteine methylesterase,
prenylcysteine methylesterase		 -0.66 0.31 -0.32
33 AT2G14110 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.65 0.3 -0.3
34 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 0.65 0.31 -0.32
35 AT5G16990 Zinc-binding dehydrogenase family protein -0.65 0.31 -0.33
36 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.65 0.3 -0.35
37 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 -0.65 0.34 -0.29
38 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.65 0.31 -0.28
39 AT3G09250 Nuclear transport factor 2 (NTF2) family protein -0.65 0.3 -0.3
40 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.65 0.3 -0.31
41 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.64 0.29 -0.32
42 AT2G21510 DNAJ heat shock N-terminal domain-containing protein -0.64 0.32 -0.3
43 AT4G09390 transposable element gene -0.64 0.33 -0.33
44 AT5G41960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.31 -0.3
45 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.64 0.32 -0.31
46 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 0.64 0.3 -0.31
47 AT5G58970 uncoupling protein 2 uncoupling protein 2, uncoupling
protein 2		 -0.64 0.3 -0.33
48 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.63 0.29 -0.32
49 AT5G14020 Endosomal targeting BRO1-like domain-containing protein 0.63 0.32 -0.3
50 AT1G21740 Protein of unknown function (DUF630 and DUF632) 0.63 0.32 -0.32
51 AT5G54230 myb domain protein 49 myb domain protein 49, myb domain
protein 49		 0.63 0.34 -0.32
52 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.63 0.33 -0.33
53 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.3
54 AT1G18910 zinc ion binding;zinc ion binding 0.63 0.31 -0.31
55 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.63 0.31 -0.31
56 AT5G26260 TRAF-like family protein 0.63 0.32 -0.31
57 AT2G37340 arginine/serine-rich zinc knuckle-containing protein 33 arginine/serine-rich zinc
knuckle-containing protein 33,
ARGININE/SERINE-RICH ZINC
KNUCKLE-CONTAINING PROTEIN 33,
arginine/serine-rich zinc
knuckle-containing protein 33,
arginine/serine-rich zinc
knuckle-containing protein 33		 0.63 0.34 -0.32
58 AT1G10650 SBP (S-ribonuclease binding protein) family protein -0.62 0.31 -0.3
59 AT5G53090 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.31 -0.31
60 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 60 Blast hits to 60 proteins
in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0;
Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.62 0.31 -0.33
61 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.62 0.31 -0.3
62 AT2G34700 Pollen Ole e 1 allergen and extensin family protein 0.62 0.3 -0.32
63 AT1G63710 cytochrome P450, family 86, subfamily A, polypeptide 7 cytochrome P450, family 86,
subfamily A, polypeptide 7		 -0.62 0.33 -0.31
64 AT1G11700 Protein of unknown function, DUF584 -0.62 0.33 -0.3
65 AT1G75520 SHI-related sequence 5 SHI-related sequence 5 0.62 0.32 -0.3
66 AT5G62260 AT hook motif DNA-binding family protein 0.62 0.33 -0.33
67 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 0.62 0.31 -0.31
68 AT5G47440 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.62 0.31 -0.31
69 AT1G52740 histone H2A protein 9 histone H2A protein 9 0.62 0.34 -0.31
70 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 0.62 0.3 -0.3
71 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.61 0.33 -0.32
72 AT1G51830 Leucine-rich repeat protein kinase family protein 0.61 0.32 -0.3
73 AT4G26950 Protein of unknown function, DUF584 -0.61 0.33 -0.3
74 AT5G25475 AP2/B3-like transcriptional factor family protein 0.61 0.29 -0.32
75 AT5G64950 Mitochondrial transcription termination factor family
protein		 0.6 0.33 -0.34
76 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 0.6 0.3 -0.31
77 AT1G13980 sec7 domain-containing protein EMBRYO DEFECTIVE 30, GNOM,
VASCULAR NETWORK 7		 0.6 0.31 -0.3
78 AT1G13800 Tetratricopeptide repeat (TPR)-like superfamily protein embryonic factor 19 0.6 0.31 -0.31
79 AT5G58860 cytochrome P450, family 86, subfamily A, polypeptide 1 CYP86, cytochrome P450, family 86,
subfamily A, polypeptide 1		 0.6 0.29 -0.32
80 AT4G17730 syntaxin of plants 23 ATSYP23, syntaxin of plants 23 0.6 0.31 -0.31
81 AT1G28360 ERF domain protein 12 ERF DOMAIN PROTEIN 12, ERF domain
protein 12		 0.6 0.33 -0.31
82 AT2G30340 LOB domain-containing protein 13 LOB domain-containing protein 13 0.6 0.31 -0.34
83 AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.59 0.28 -0.31
84 AT2G30670 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.3 -0.31
85 AT2G33530 serine carboxypeptidase-like 46 serine carboxypeptidase-like 46 -0.59 0.32 -0.3
86 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.32 -0.31
87 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.58 0.3 -0.32
88 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 -0.58 0.31 -0.33
89 AT3G27840 ribosomal protein L12-B ribosomal protein L12-B -0.58 0.32 -0.31
90 AT2G31670 Stress responsive alpha-beta barrel domain protein -0.58 0.31 -0.31
91 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 -0.58 0.31 -0.31
92 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 -0.58 0.33 -0.29
93 AT4G14880 O-acetylserine (thiol) lyase (OAS-TL) isoform A1 ATCYS-3A, CYTACS1, O-acetylserine
(thiol) lyase (OAS-TL) isoform A1,
ONSET OF LEAF DEATH 3		 -0.57 0.32 -0.31
94 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 -0.57 0.29 -0.31
95 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.3 -0.33
96 AT1G78620 Protein of unknown function DUF92, transmembrane -0.57 0.32 -0.34
97 AT4G27480 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.57 0.31 -0.3
98 AT5G61510 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.56 0.31 -0.3
99 AT2G44760 Domain of unknown function (DUF3598) -0.56 0.32 -0.34
100 AT4G29810 MAP kinase kinase 2 MAP kinase kinase 2, MAP KINASE
KINASE 1, MAP kinase kinase 2		 -0.56 0.31 -0.33
101 AT5G08290 mRNA splicing factor, thioredoxin-like U5 snRNP YELLOW-LEAF-SPECIFIC GENE 8 -0.56 0.29 -0.34
102 AT4G33640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.32
103 AT5G45800 Leucine-rich repeat protein kinase family protein maternal effect embryo arrest 62 -0.56 0.3 -0.31
104 AT3G59580 Plant regulator RWP-RK family protein -0.55 0.34 -0.29
105 AT2G47440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.3 -0.34
106 AT2G05640 transposable element gene -0.55 0.3 -0.32
107 AT2G10640 transposable element gene -0.54 0.31 -0.3
108 AT1G54050 HSP20-like chaperones superfamily protein -0.54 0.32 -0.33
109 AT5G27360 Major facilitator superfamily protein SFP2 -0.54 0.33 -0.31
110 AT4G25760 glutamine dumper 2 glutamine dumper 2, glutamine
dumper 2		 -0.54 0.33 -0.32
111 AT4G24300 Peptidase C50, separase -0.54 0.3 -0.32
112 AT4G13000 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.54 0.31 -0.32
113 AT5G02380 metallothionein 2B metallothionein 2B -0.54 0.32 -0.32
114 AT5G60130 AP2/B3-like transcriptional factor family protein -0.54 0.29 -0.31
115 AT5G46590 NAC domain containing protein 96 NAC domain containing protein 96,
NAC domain containing protein 96		 -0.54 0.33 -0.33