AT2G32560 : -
Query Information
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AGICode AT2G32560
Description F-box family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G32560 F-box family protein 1 0.32 -0.32
2 AT4G30410 sequence-specific DNA binding transcription factors 0.73 0.29 -0.31
3 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.68 0.31 -0.3
4 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.67 0.35 -0.33
5 AT3G02170 longifolia2 LONGIFOLIA2 0.65 0.33 -0.32
6 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.65 0.33 -0.31
7 AT4G12350 myb domain protein 42 myb domain protein 42, myb domain
protein 42		 -0.64 0.32 -0.3
8 AT1G73130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G17780.2); Has 1447 Blast hits
to 774 proteins in 215 species: Archae - 0; Bacteria - 679;
Metazoa - 377; Fungi - 171; Plants - 42; Viruses - 6; Other
Eukaryotes - 172 (source: NCBI BLink).		 -0.63 0.3 -0.33
9 AT4G07430 transposable element gene 0.63 0.3 -0.34
10 AT3G46920 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.63 0.33 -0.32
11 AT1G45160 Protein kinase superfamily protein -0.63 0.34 -0.33
12 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.3 -0.32
13 AT5G44970 Protein with RNI-like/FBD-like domains -0.62 0.3 -0.29
14 AT4G18920 Protein of unknown function (DUF1264) 0.62 0.32 -0.31
15 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.31 -0.33
16 AT5G66960 Prolyl oligopeptidase family protein -0.62 0.31 -0.32
17 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.62 0.32 -0.32
18 AT1G64920 UDP-Glycosyltransferase superfamily protein -0.62 0.33 -0.3
19 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 0.62 0.29 -0.32
20 AT5G51680 hydroxyproline-rich glycoprotein family protein -0.61 0.32 -0.31
21 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.61 0.32 -0.31
22 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 -0.61 0.32 -0.31
23 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.33 -0.32
24 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 -0.61 0.3 -0.3
25 AT5G15700 DNA/RNA polymerases superfamily protein -0.6 0.32 -0.33
26 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.34 -0.3
27 AT3G22121 other RNA -0.6 0.33 -0.34
28 AT1G11040 HSP40/DnaJ peptide-binding protein 0.6 0.31 -0.34
29 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.6 0.32 -0.31
30 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.6 0.32 -0.32
31 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 -0.59 0.29 -0.33
32 AT5G52950 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.31 -0.3
33 AT1G36910 transposable element gene 0.59 0.31 -0.33
34 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.59 0.28 -0.3
35 AT2G25140 casein lytic proteinase B4 CASEIN LYTIC PROTEINASE B-M,
casein lytic proteinase B4, HEAT
SHOCK PROTEIN 98.7		 -0.59 0.33 -0.31
36 AT1G61260 Protein of unknown function (DUF761) 0.59 0.3 -0.3
37 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.58 0.3 -0.31
38 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 -0.58 0.33 -0.32
39 AT3G49310 Major facilitator superfamily protein -0.58 0.3 -0.3
40 AT1G08210 Eukaryotic aspartyl protease family protein -0.58 0.31 -0.32
41 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.31 -0.34
42 AT3G58810 metal tolerance protein A2 ARABIDOPSIS METAL TOLERANCE
PROTEIN 3, ATMTPA2, METAL
TOLERANCE PROTEIN 3, metal
tolerance protein A2		 -0.57 0.32 -0.33
43 AT4G07586 transposable element gene -0.57 0.3 -0.33
44 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family 0.57 0.32 -0.35
45 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.57 0.32 -0.32
46 AT1G70470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits
to 64 proteins in 22 species: Archae - 0; Bacteria - 2;
Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.57 0.32 -0.33
47 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 -0.57 0.3 -0.32
48 AT2G35585 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits
to 67 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.33 -0.32
49 AT1G02740 MRG family protein 0.56 0.31 -0.29
50 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.56 0.32 -0.3
51 AT5G66890 Leucine-rich repeat (LRR) family protein -0.56 0.31 -0.31
52 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 -0.56 0.31 -0.31
53 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.29 -0.3
54 AT3G03080 Zinc-binding dehydrogenase family protein -0.55 0.28 -0.32
55 AT4G15010 Mitochondrial substrate carrier family protein -0.55 0.31 -0.32
56 AT4G02560 Homeodomain-like superfamily protein luminidependens -0.55 0.29 -0.34
57 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 0.55 0.3 -0.29
58 AT4G38480 Transducin/WD40 repeat-like superfamily protein 0.55 0.31 -0.31
59 AT5G66500 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.3 -0.32
60 AT2G06640 transposable element gene 0.55 0.3 -0.3
61 AT4G28530 NAC domain containing protein 74 NAC domain containing protein 74,
NAC domain containing protein 74		 0.54 0.31 -0.32
62 AT2G33870 RAB GTPase homolog A1H RAB GTPase homolog A1H -0.54 0.31 -0.31
63 AT4G16280 RNA binding;abscisic acid binding FCA -0.54 0.3 -0.29
64 AT1G64670 alpha/beta-Hydrolases superfamily protein BODYGUARD1, 9-CIS EPOXYCAROTENOID
DIOXYGENASE DEFECTIVE 1		 0.54 0.33 -0.31
65 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 -0.54 0.31 -0.31
66 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.33 -0.3
67 AT2G27090 Protein of unknown function (DUF630 and DUF632) -0.54 0.29 -0.3
68 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.54 0.32 -0.32
69 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.32 -0.3
70 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.54 0.32 -0.31
71 AT1G31830 Amino acid permease family protein -0.54 0.31 -0.31
72 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 -0.54 0.32 -0.3
73 AT4G36560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.3 -0.32
74 AT1G33060 NAC 014 NAC 014, NAC 014 0.53 0.33 -0.32
75 AT1G02680 TBP-associated factor 13 TBP-associated factor 13 0.52 0.31 -0.29
76 AT4G22160 unknown protein; Has 42 Blast hits to 42 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.33 -0.32
77 AT3G53200 myb domain protein 27 myb domain protein 27, myb domain
protein 27		 0.52 0.34 -0.34
78 AT1G47370 Toll-Interleukin-Resistance (TIR) domain family protein 0.52 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.66 0.3 -0.31 C0008
80 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.64 0.32 -0.31
81 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.58 0.44 -0.43 C0015
82 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.58 0.44 -0.46 C0027
83 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		-0.56 0.33 -0.31 C0140
84 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.55 0.35 -0.3 C0069