AT2G32590 : EMBRYO DEFECTIVE 2795
Query Information
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AGICode AT2G32590
Description LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).		 EMBRYO DEFECTIVE 2795 1 0.32 -0.31
2 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 0.75 0.31 -0.31
3 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 0.74 0.29 -0.33
4 AT1G22380 UDP-glucosyl transferase 85A3 UDP-glucosyl transferase 85A3,
UDP-glucosyl transferase 85A3		 -0.73 0.31 -0.31
5 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 0.72 0.3 -0.33
6 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 0.72 0.33 -0.32
7 AT1G35350 EXS (ERD1/XPR1/SYG1) family protein -0.72 0.32 -0.32
8 AT5G27350 Major facilitator superfamily protein SFP1 -0.71 0.31 -0.31
9 AT1G32340 NDR1/HIN1-like 8 NDR1/HIN1-like 8 -0.7 0.33 -0.32
10 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 0.7 0.3 -0.31
11 AT4G35600 Protein kinase superfamily protein CAST AWAY, CONNEXIN 32, kinase 4 -0.69 0.31 -0.33
12 AT1G60940 SNF1-related protein kinase 2.10 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-10, SNF1-related
protein kinase 2.10, SNF1-RELATED
KINASE 2B		 -0.69 0.3 -0.33
13 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 0.69 0.33 -0.3
14 AT1G15660 centromere protein C CENP-C HOMOLOGUE, centromere
protein C		 0.69 0.31 -0.31
15 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 0.69 0.32 -0.29
16 AT2G40540 potassium transporter 2 ATKT2, ATKUP2, potassium
transporter 2, KUP2, SHY3, TRK2		 0.68 0.33 -0.3
17 AT5G48600 structural maintenance of chromosome 3 ARABIDOPSIS THALIANA CHROMOSOME
ASSOCIATED PROTEIN-C, structural
maintenance of chromosome 3,
ARABIDOPSIS THALIANA STRUCTURAL
MAINTENANCE OF CHROMOSOME 4,
structural maintenance of
chromosome 3		 0.68 0.31 -0.31
18 AT5G23810 amino acid permease 7 amino acid permease 7 -0.68 0.3 -0.31
19 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.31
20 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 0.68 0.29 -0.29
21 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 0.68 0.32 -0.32
22 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 0.67 0.29 -0.31
23 AT5G12440 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.67 0.3 -0.32
24 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 -0.67 0.32 -0.32
25 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.66 0.31 -0.34
26 AT1G55090 carbon-nitrogen hydrolase family protein -0.66 0.32 -0.32
27 AT3G05200 RING/U-box superfamily protein ATL6 -0.66 0.31 -0.31
28 AT3G16860 COBRA-like protein 8 precursor COBRA-like protein 8 precursor -0.66 0.31 -0.33
29 AT5G66850 mitogen-activated protein kinase kinase kinase 5 mitogen-activated protein kinase
kinase kinase 5		 0.65 0.3 -0.3
30 AT1G04020 breast cancer associated RING 1 ATBARD1, breast cancer associated
RING 1, ROW1		 0.65 0.3 -0.33
31 AT3G16870 GATA transcription factor 17 GATA transcription factor 17 0.65 0.31 -0.32
32 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.65 0.34 -0.31
33 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 0.65 0.32 -0.31
34 AT3G02400 SMAD/FHA domain-containing protein 0.65 0.32 -0.34
35 AT4G17180 O-Glycosyl hydrolases family 17 protein 0.65 0.3 -0.31
36 AT3G25180 cytochrome P450, family 82, subfamily G, polypeptide 1 cytochrome P450, family 82,
subfamily G, polypeptide 1		 -0.65 0.32 -0.31
37 AT5G12390 Tetratricopeptide repeat (TPR)-like superfamily protein FISSION 1B -0.64 0.32 -0.3
38 AT1G66160 CYS, MET, PRO, and GLY protein 1 ATCMPG1, CYS, MET, PRO, and GLY
protein 1		 -0.64 0.32 -0.33
39 AT3G59660 C2 domain-containing protein / GRAM domain-containing
protein		 -0.64 0.32 -0.31
40 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.64 0.32 -0.33
41 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.64 0.31 -0.3
42 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.64 0.31 -0.31
43 AT3G02460 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.63 0.32 -0.32
44 AT4G34310 alpha/beta-Hydrolases superfamily protein -0.63 0.33 -0.31
45 AT1G63650 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC-2, EGL1, ENHANCER OF GLABRA
3		 0.63 0.32 -0.32
46 AT4G37470 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.33
47 AT4G33050 calmodulin-binding family protein embryo sac development arrest 39 -0.63 0.33 -0.3
48 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 0.63 0.33 -0.34
49 AT1G32920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to wounding; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast
hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.34 -0.3
50 AT2G34600 jasmonate-zim-domain protein 7 jasmonate-zim-domain protein 7,
TIFY5B		 -0.63 0.3 -0.31
51 AT2G23320 WRKY DNA-binding protein 15 WRKY DNA-binding protein 15 -0.63 0.3 -0.3
52 AT4G26310 elongation factor P (EF-P) family protein -0.63 0.33 -0.33
53 AT2G42490 Copper amine oxidase family protein -0.63 0.31 -0.32
54 AT3G09010 Protein kinase superfamily protein -0.63 0.3 -0.33
55 AT1G13210 autoinhibited Ca2+/ATPase II autoinhibited Ca2+/ATPase II -0.62 0.3 -0.31
56 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.3
57 AT1G24350 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.62 0.32 -0.31
58 AT2G21000 transposable element gene 0.62 0.34 -0.32
59 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 -0.62 0.34 -0.31
60 AT1G49320 unknown seed protein like 1 unknown seed protein like 1,
unknown seed protein like 1		 0.61 0.3 -0.3
61 AT5G19150 pfkB-like carbohydrate kinase family protein -0.61 0.29 -0.32
62 AT2G42360 RING/U-box superfamily protein -0.61 0.32 -0.3
63 AT3G48460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.61 0.31 -0.32
64 AT4G01010 cyclic nucleotide-gated channel 13 CYCLIC NUCLEOTIDE-GATED CHANNEL
13, cyclic nucleotide-gated
channel 13		 -0.61 0.35 -0.32
65 AT1G06080 delta 9 desaturase 1 delta 9 desaturase 1 0.61 0.29 -0.31
66 AT2G01220 Nucleotidylyl transferase superfamily protein -0.61 0.32 -0.32
67 AT3G03590 SWIB/MDM2 domain superfamily protein 0.61 0.3 -0.32
68 AT3G27810 myb domain protein 21 myb domain protein 21, ARABIDOPSIS
THALIANA MYB DOMAIN PROTEIN 3,
myb domain protein 21		 -0.61 0.32 -0.3
69 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase -0.61 0.32 -0.34
70 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 0.61 0.32 -0.3
71 AT4G17370 Oxidoreductase family protein -0.6 0.31 -0.31
72 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 -0.6 0.32 -0.33
73 AT3G54630 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80
(InterPro:IPR005550); Has 24780 Blast hits to 15608
proteins in 1321 species: Archae - 545; Bacteria - 2969;
Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39;
Other Eukaryotes - 4868 (source: NCBI BLink).		 0.6 0.32 -0.29
74 AT5G22250 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 CCR4- associated factor 1b, CCR4-
associated factor 1b		 -0.6 0.33 -0.31
75 AT3G53390 Transducin/WD40 repeat-like superfamily protein -0.6 0.32 -0.29
76 AT3G57750 Protein kinase superfamily protein -0.6 0.32 -0.32
77 AT1G01370 Histone superfamily protein CENTROMERIC HISTONE H3, HTR12 0.59 0.31 -0.33
78 AT2G24210 terpene synthase 10 terpene synthase 10 -0.59 0.31 -0.34
79 AT3G01430 BEST Arabidopsis thaliana protein match is: NHL
domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast
hits to 98 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
80 AT2G47900 tubby like protein 3 tubby like protein 3, tubby like
protein 3		 0.59 0.33 -0.32
81 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.29
82 AT1G21640 NAD kinase 2 NAD KINASE 2, NAD kinase 2 -0.59 0.32 -0.33
83 AT2G41050 PQ-loop repeat family protein / transmembrane family
protein		 0.59 0.32 -0.3
84 AT2G35290 unknown protein; Has 39 Blast hits to 39 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.34 -0.31
85 AT5G64500 Major facilitator superfamily protein -0.59 0.33 -0.3
86 AT4G14150 phragmoplast-associated kinesin-related protein 1 KINESIN-12A,
phragmoplast-associated
kinesin-related protein 1		 0.58 0.32 -0.32
87 AT4G03010 RNI-like superfamily protein 0.58 0.31 -0.3
88 AT2G18010 SAUR-like auxin-responsive protein family 0.58 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0164 MST_1596.8 - - - -0.73 0.45 -0.45
90 C0165 MST_1688.6 - - - -0.72 0.45 -0.46
91 C0160 MST_1509.5 - - - -0.65 0.48 -0.44
92 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.64 0.44 -0.46 C0023
93 C0230 Rutin - - polyphenol biosynthesis 0.58 0.45 -0.44