AT2G44050 : COI1 SUPPRESSOR1
Query Information
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AGICode AT2G44050
Description 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 1 0.32 -0.3
2 AT5G63890 histidinol dehydrogenase histidinol dehydrogenase,
histidinol dehydrogenase,
HISTIDINE BIOSYNTHESIS 8		 0.88 0.31 -0.3
3 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.86 0.32 -0.32
4 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.83 0.3 -0.3
5 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.82 0.32 -0.3
6 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 0.79 0.31 -0.34
7 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 0.79 0.32 -0.32
8 AT3G23300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.3 -0.33
9 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.78 0.29 -0.31
10 AT1G78900 vacuolar ATP synthase subunit A vacuolar ATP synthase subunit A 0.77 0.32 -0.29
11 AT3G11200 alfin-like 2 alfin-like 2 0.77 0.3 -0.28
12 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.77 0.31 -0.32
13 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.33 -0.32
14 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.76 0.31 -0.33
15 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.76 0.33 -0.32
16 AT4G38510 ATPase, V1 complex, subunit B protein 0.76 0.33 -0.31
17 AT3G57420 Protein of unknown function (DUF288) 0.76 0.3 -0.35
18 AT3G50520 Phosphoglycerate mutase family protein 0.75 0.3 -0.31
19 AT4G22310 Uncharacterised protein family (UPF0041) 0.75 0.32 -0.31
20 AT1G66670 CLP protease proteolytic subunit 3 CLP protease proteolytic subunit
3, NCLPP3		 0.75 0.29 -0.31
21 AT5G38480 general regulatory factor 3 general regulatory factor 3, RCI1 0.74 0.3 -0.32
22 AT2G20690 lumazine-binding family protein 0.74 0.3 -0.31
23 AT5G47435 formyltetrahydrofolate deformylase, putative 0.74 0.31 -0.33
24 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.74 0.33 -0.32
25 AT2G20270 Thioredoxin superfamily protein 0.74 0.32 -0.32
26 AT2G43090 Aconitase/3-isopropylmalate dehydratase protein 0.73 0.33 -0.3
27 AT4G14160 Sec23/Sec24 protein transport family protein 0.73 0.3 -0.35
28 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.73 0.3 -0.31
29 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.73 0.3 -0.31
30 AT5G61240 Leucine-rich repeat (LRR) family protein 0.72 0.32 -0.3
31 AT5G47320 ribosomal protein S19 ribosomal protein S19 0.72 0.31 -0.3
32 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 0.72 0.31 -0.34
33 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.72 0.32 -0.32
34 AT4G37830 cytochrome c oxidase-related 0.72 0.28 -0.32
35 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 0.72 0.3 -0.32
36 AT4G16143 importin alpha isoform 2 importin alpha isoform 2 0.72 0.34 -0.32
37 AT1G18500 methylthioalkylmalate synthase-like 4 ISOPROPYLMALATE SYNTHASE 1,
methylthioalkylmalate
synthase-like 4		 0.72 0.32 -0.31
38 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.72 0.32 -0.3
39 AT2G45010 PLAC8 family protein 0.71 0.32 -0.29
40 AT1G13320 protein phosphatase 2A subunit A3 protein phosphatase 2A subunit A3 0.71 0.31 -0.3
41 AT2G26680 CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM
(InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins
in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0;
Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451
(source: NCBI BLink).		 0.71 0.31 -0.34
42 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 0.7 0.3 -0.34
43 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.7 0.32 -0.32
44 AT4G27080 PDI-like 5-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 7, PDI-like
5-4, PROTEIN DISULFIDE ISOMERASE
7, PDI-like 5-4		 0.7 0.31 -0.31
45 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.31 -0.33
46 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.7 0.32 -0.31
47 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.7 0.31 -0.3
48 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).		 0.7 0.32 -0.32
49 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.7 0.31 -0.3
50 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.33 -0.33
51 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 -0.7 0.32 -0.31
52 AT5G40810 Cytochrome C1 family 0.69 0.32 -0.32
53 AT3G53560 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.33 -0.3
54 AT5G06580 FAD-linked oxidases family protein 0.69 0.3 -0.31
55 AT2G05830 NagB/RpiA/CoA transferase-like superfamily protein 0.69 0.31 -0.29
56 AT4G22910 FIZZY-related 2 cell cycle switch protein 52 A1,
FIZZY-related 2		 0.69 0.33 -0.33
57 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.68 0.32 -0.32
58 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.68 0.29 -0.32
59 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 0.68 0.31 -0.33
60 AT1G26160 Metal-dependent phosphohydrolase 0.68 0.31 -0.3
61 AT3G04120 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C SUBUNIT, GAPC-1,
glyceraldehyde-3-phosphate
dehydrogenase C subunit 1		 0.68 0.3 -0.31
62 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.68 0.32 -0.32
63 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.68 0.33 -0.31
64 AT3G01850 Aldolase-type TIM barrel family protein 0.68 0.3 -0.31
65 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.33
66 AT3G56840 FAD-dependent oxidoreductase family protein 0.67 0.33 -0.3
67 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.67 0.29 -0.32
68 AT2G16460 Protein of unknown function (DUF1640) 0.67 0.33 -0.31
69 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.67 0.33 -0.32
70 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 0.67 0.3 -0.32
71 AT4G12060 Double Clp-N motif protein 0.66 0.31 -0.29
72 AT3G47520 malate dehydrogenase malate dehydrogenase, plastidic
NAD-dependent malate dehydrogenase		 0.66 0.32 -0.33
73 AT2G20860 lipoic acid synthase 1 lipoic acid synthase 1 0.66 0.3 -0.33
74 AT5G41480 Folylpolyglutamate synthetase family protein A. THALIANA DHFS-FPGS HOMOLOG A,
DHFS-FPGS HOMOLOG A, EMBRYO
DEFECTIVE 9, GLOBULAR ARREST1		 0.66 0.29 -0.31
75 AT4G17420 Tryptophan RNA-binding attenuator protein-like 0.66 0.33 -0.32
76 AT1G32400 tobamovirus multiplication 2A tobamovirus multiplication 2A 0.66 0.32 -0.33
77 AT4G34110 poly(A) binding protein 2 ARABIDOPSIS POLY(A) BINDING 2,
poly(A) binding protein 2, POLY(A)
BINDING PROTEIN 2		 0.66 0.31 -0.32
78 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.66 0.31 -0.33
79 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.31 -0.34
80 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.63 0.31 -0.3
81 AT5G18930 Adenosylmethionine decarboxylase family protein BUSHY AND DWARF 2, SAMDC4 -0.62 0.32 -0.31
82 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.61 0.33 -0.3
83 AT2G32290 beta-amylase 6 beta-amylase 6, BETA-AMYLASE 5 -0.6 0.34 -0.31
84 AT5G11400 Protein kinase superfamily protein -0.58 0.34 -0.31
85 AT4G17770 trehalose phosphatase/synthase 5 trehalose phosphatase/synthase 5,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S5, trehalose phosphatase/synthase
5		 -0.58 0.32 -0.3
86 AT3G26480 Transducin family protein / WD-40 repeat family protein -0.58 0.34 -0.31
87 AT3G23160 Protein of unknown function (DUF668) -0.57 0.31 -0.33
88 AT4G00970 cysteine-rich RLK (RECEPTOR-like protein kinase) 41 cysteine-rich RLK (RECEPTOR-like
protein kinase) 41		 -0.57 0.31 -0.29
89 AT2G01660 plasmodesmata-located protein 6 plasmodesmata-located protein 6 -0.57 0.29 -0.31
90 AT5G09220 amino acid permease 2 amino acid permease 2 -0.56 0.31 -0.32
91 AT3G10190 Calcium-binding EF-hand family protein -0.56 0.33 -0.3
92 AT3G18370 C2 domain-containing protein ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF -0.56 0.33 -0.34
93 AT1G02980 cullin 2 ATCUL2, cullin 2 -0.56 0.31 -0.32
94 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.55 0.31 -0.29
95 AT5G52750 Heavy metal transport/detoxification superfamily protein -0.54 0.31 -0.32
96 AT1G74440 Protein of unknown function (DUF962) -0.54 0.32 -0.3
97 AT2G18100 Protein of unknown function (DUF726) -0.53 0.31 -0.31
98 AT3G28830 Protein of unknown function (DUF1216) -0.53 0.3 -0.3
99 AT1G52790 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.53 0.33 -0.3
100 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 -0.53 0.32 -0.33
101 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.53 0.32 -0.34
102 AT5G25120 ytochrome p450, family 71, subfamily B, polypeptide 11 ytochrome p450, family 71,
subfamily B, polypeptide 11		 -0.51 0.31 -0.31
103 AT4G31890 ARM repeat superfamily protein -0.51 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		-0.54 0.29 -0.31 C0148