AT2G43970 : -
Query Information
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AGICode AT2G43970
Description RNA-binding protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43970 RNA-binding protein 1 0.3 -0.33
2 AT1G21640 NAD kinase 2 NAD KINASE 2, NAD kinase 2 0.73 0.31 -0.3
3 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 -0.72 0.29 -0.29
4 AT1G55090 carbon-nitrogen hydrolase family protein 0.7 0.33 -0.31
5 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 0.69 0.32 -0.35
6 AT1G52550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast
hits to 51 proteins in 18 species: Archae - 0; Bacteria -
8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other
Eukaryotes - 10 (source: NCBI BLink).		 0.69 0.3 -0.32
7 AT1G63650 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC-2, EGL1, ENHANCER OF GLABRA
3		 -0.68 0.33 -0.33
8 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.32
9 AT2G27970 CDK-subunit 2 CDK-subunit 2 -0.67 0.3 -0.31
10 AT3G27200 Cupredoxin superfamily protein -0.66 0.3 -0.33
11 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.63 0.3 -0.3
12 AT4G37470 alpha/beta-Hydrolases superfamily protein -0.63 0.33 -0.31
13 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 0.63 0.3 -0.31
14 AT3G58690 Protein kinase superfamily protein -0.63 0.34 -0.28
15 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.62 0.3 -0.33
16 AT5G19150 pfkB-like carbohydrate kinase family protein 0.62 0.31 -0.31
17 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 -0.62 0.32 -0.32
18 AT3G12730 Homeodomain-like superfamily protein 0.61 0.33 -0.32
19 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 0.61 0.32 -0.33
20 AT3G58810 metal tolerance protein A2 ARABIDOPSIS METAL TOLERANCE
PROTEIN 3, ATMTPA2, METAL
TOLERANCE PROTEIN 3, metal
tolerance protein A2		 0.61 0.3 -0.33
21 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.61 0.31 -0.31
22 AT2G21000 transposable element gene -0.61 0.33 -0.31
23 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 -0.61 0.33 -0.32
24 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 -0.61 0.32 -0.32
25 AT4G15260 UDP-Glycosyltransferase superfamily protein 0.61 0.33 -0.31
26 AT1G61850 phospholipases;galactolipases 0.6 0.31 -0.3
27 AT3G06450 HCO3- transporter family 0.6 0.32 -0.34
28 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 -0.6 0.32 -0.31
29 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 -0.6 0.29 -0.33
30 AT2G20790 clathrin adaptor complexes medium subunit family protein 0.59 0.31 -0.3
31 AT1G07610 metallothionein 1C metallothionein 1C 0.59 0.31 -0.31
32 AT1G78000 sulfate transporter 1;2 SELENATE RESISTANT 1, sulfate
transporter 1;2		 0.59 0.33 -0.31
33 AT4G35070 SBP (S-ribonuclease binding protein) family protein 0.59 0.31 -0.32
34 AT2G32850 Protein kinase superfamily protein 0.59 0.32 -0.31
35 AT4G15780 vesicle-associated membrane protein 724 vesicle-associated membrane
protein 724, vesicle-associated
membrane protein 724		 0.59 0.3 -0.32
36 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 0.59 0.32 -0.31
37 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13		 -0.59 0.31 -0.31
38 AT1G12470 zinc ion binding 0.58 0.34 -0.33
39 AT3G63340 Protein phosphatase 2C family protein 0.58 0.3 -0.33
40 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.58 0.32 -0.29
41 AT1G13600 basic leucine-zipper 58 basic leucine-zipper 58, basic
leucine-zipper 58		 -0.58 0.3 -0.3
42 AT3G48460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.32 -0.32
43 AT5G56250 hapless 8 HAPLESS 8 0.57 0.31 -0.3
44 AT5G55810 nicotinate/nicotinamide mononucleotide adenyltransferase nicotinate/nicotinamide
mononucleotide adenyltransferase,
nicotinate/nicotinamide
mononucleotide adenyltransferase		 0.57 0.3 -0.32
45 AT5G45370 nodulin MtN21 /EamA-like transporter family protein 0.56 0.33 -0.3
46 AT1G49560 Homeodomain-like superfamily protein -0.56 0.3 -0.33
47 AT5G61150 leo1-like family protein VERNALIZATION INDEPENDENCE 4 0.56 0.3 -0.34
48 AT1G02670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.33 -0.33
49 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein -0.56 0.3 -0.3
50 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 -0.56 0.31 -0.32
51 AT3G19490 sodium:hydrogen antiporter 1 ARABIDOPSIS THALIANA NA/H
ANTIPORTER 1, sodium:hydrogen
antiporter 1		 0.56 0.32 -0.31
52 AT1G02740 MRG family protein -0.55 0.33 -0.31
53 AT1G34545 transposable element gene 0.55 0.31 -0.3
54 AT3G54250 GHMP kinase family protein -0.55 0.31 -0.31
55 AT5G38195 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.55 0.29 -0.32
56 AT2G19580 tetraspanin2 tetraspanin2 -0.55 0.32 -0.3
57 AT4G38400 expansin-like A2 expansin-like A2, ATEXPL2, ATHEXP
BETA 2.2, expansin-like A2,
EXPANSIN L2		 -0.55 0.3 -0.32
58 AT1G75800 Pathogenesis-related thaumatin superfamily protein -0.55 0.3 -0.32
59 AT4G38800 methylthioadenosine nucleosidase 1 ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 1, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
1, METHYLTHIOADENOSINE
NUCLEOSIDASE 1,
methylthioadenosine nucleosidase 1		 0.55 0.31 -0.31
60 AT1G76180 Dehydrin family protein EARLY RESPONSE TO DEHYDRATION 14 -0.54 0.32 -0.32
61 AT2G40530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, inflorescence
meristem, petal, flower; EXPRESSED DURING: 4 anthesis,
petal differentiation and expansion stage; Has 5 Blast hits
to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.29 -0.3
62 AT3G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.34 -0.3
63 AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 adenosine-5'-phosphosulfate (APS)
kinase 4		 -0.54 0.33 -0.36
64 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 -0.53 0.32 -0.32
65 AT5G59130 Subtilase family protein -0.53 0.34 -0.31
66 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.53 0.33 -0.32
67 AT4G33330 plant glycogenin-like starch initiation protein 3 glucuronic acid substitution of
xylan 2, plant glycogenin-like
starch initiation protein 3		 -0.53 0.33 -0.32
68 AT3G04690 Malectin/receptor-like protein kinase family protein ANXUR1 -0.52 0.33 -0.32
69 AT3G60830 actin-related protein 7 ARP7, actin-related protein 7,
actin-related protein 7		 -0.52 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0163 MST_1589.2 - - - 0.71 0.49 -0.45
71 C0164 MST_1596.8 - - - 0.71 0.47 -0.46
72 C0165 MST_1688.6 - - - 0.7 0.49 -0.47
73 C0160 MST_1509.5 - - - 0.7 0.43 -0.45
74 C0161 MST_1566.3 - - - 0.7 0.43 -0.47
75 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		0.63 0.31 -0.33 C0069
76 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		0.59 0.3 -0.32 C0060