AT2G43880 : -
Query Information
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AGICode AT2G43880
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43880 Pectin lyase-like superfamily protein 1 0.29 -0.33
2 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.74 0.31 -0.32
3 AT3G04780 Protein of unknown function (DUF1000) 0.73 0.31 -0.31
4 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.3 -0.32
5 AT2G32270 zinc transporter 3 precursor zinc transporter 3 precursor 0.73 0.32 -0.34
6 AT4G35200 Arabidopsis protein of unknown function (DUF241) 0.73 0.32 -0.33
7 AT1G03070 Bax inhibitor-1 family protein -0.71 0.29 -0.32
8 AT1G07020 unknown protein; Has 39 Blast hits to 39 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.71 0.31 -0.34
9 AT4G36420 Ribosomal protein L12 family protein 0.7 0.34 -0.31
10 AT5G18450 Integrase-type DNA-binding superfamily protein -0.7 0.31 -0.29
11 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.7 0.3 -0.32
12 AT4G30640 RNI-like superfamily protein 0.7 0.29 -0.33
13 AT1G02360 Chitinase family protein 0.7 0.32 -0.3
14 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 0.7 0.33 -0.32
15 AT1G07615 GTP-binding protein Obg/CgtA 0.69 0.31 -0.33
16 AT2G38905 Low temperature and salt responsive protein family -0.69 0.32 -0.32
17 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.31 -0.3
18 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.69 0.33 -0.3
19 AT2G23310 Rer1 family protein ATRER1C1 0.69 0.33 -0.3
20 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.69 0.31 -0.28
21 AT3G22490 Seed maturation protein -0.69 0.32 -0.32
22 AT5G66690 UDP-Glycosyltransferase superfamily protein UGT72E2 0.69 0.32 -0.32
23 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.68 0.32 -0.35
24 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.33 -0.31
25 AT1G09090 respiratory burst oxidase homolog B respiratory burst oxidase homolog
B, ATRBOHB-BETA, respiratory burst
oxidase homolog B		 0.68 0.32 -0.3
26 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.68 0.29 -0.32
27 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 0.68 0.3 -0.31
28 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.68 0.32 -0.31
29 AT4G03190 GRR1-like protein 1 AUXIN SIGNALING F BOX PROTEIN 1,
ATGRH1, GRR1-like protein 1		 0.68 0.32 -0.32
30 AT2G43600 Chitinase family protein 0.68 0.31 -0.3
31 AT3G04080 apyrase 1 apyrase 1, apyrase 1 0.68 0.33 -0.32
32 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.68 0.32 -0.32
33 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 0.68 0.33 -0.31
34 AT2G32470 F-box associated ubiquitination effector family protein 0.67 0.32 -0.3
35 AT3G05150 Major facilitator superfamily protein 0.67 0.33 -0.3
36 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.67 0.29 -0.33
37 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.67 0.3 -0.32
38 AT5G57500 Galactosyltransferase family protein 0.67 0.3 -0.28
39 AT5G15190 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 7 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.33 -0.33
40 AT1G15180 MATE efflux family protein -0.67 0.33 -0.31
41 AT3G50010 Cysteine/Histidine-rich C1 domain family protein 0.67 0.33 -0.31
42 AT5G17800 myb domain protein 56 myb domain protein 56, myb domain
protein 56		 0.67 0.32 -0.33
43 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.66 0.31 -0.32
44 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.66 0.32 -0.34
45 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 0.66 0.33 -0.31
46 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.29 -0.3
47 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.66 0.31 -0.33
48 AT3G43430 RING/U-box superfamily protein 0.66 0.31 -0.31
49 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.65 0.31 -0.33
50 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.31 -0.33
51 AT1G56680 Chitinase family protein 0.65 0.33 -0.32
52 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.65 0.29 -0.32
53 AT3G24790 Protein kinase superfamily protein -0.65 0.32 -0.32
54 AT1G70990 proline-rich family protein 0.65 0.3 -0.34
55 AT4G26740 seed gene 1 ARABIDOPSIS THALIANA PEROXYGENASE
1, seed gene 1, CALEOSIN1		 -0.64 0.3 -0.32
56 AT1G51840 protein kinase-related 0.64 0.31 -0.33
57 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.64 0.3 -0.31
58 AT4G14695 Uncharacterised protein family (UPF0041) 0.64 0.32 -0.32
59 AT1G71860 protein tyrosine phosphatase 1 ATPTP1, protein tyrosine
phosphatase 1		 0.64 0.32 -0.33
60 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.64 0.31 -0.36
61 AT4G27270 Quinone reductase family protein 0.64 0.33 -0.33
62 AT5G58160 actin binding -0.64 0.3 -0.32
63 AT1G05720 selenoprotein family protein 0.64 0.33 -0.29
64 AT2G24300 Calmodulin-binding protein 0.63 0.31 -0.32
65 AT3G03620 MATE efflux family protein -0.63 0.32 -0.33
66 AT3G48970 Heavy metal transport/detoxification superfamily protein 0.63 0.32 -0.31
67 AT5G51750 subtilase 1.3 subtilase 1.3, subtilase 1.3 -0.63 0.33 -0.31
68 AT1G28100 unknown protein; Has 64 Blast hits to 64 proteins in 27
species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6;
Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.3 -0.31
69 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.29 -0.32
70 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.31 -0.33
71 AT2G21490 dehydrin LEA dehydrin LEA -0.63 0.31 -0.32
72 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 -0.63 0.31 -0.31
73 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER 0.63 0.32 -0.31
74 AT5G60530 late embryogenesis abundant protein-related / LEA
protein-related		 0.63 0.35 -0.3
75 AT3G18570 Oleosin family protein -0.63 0.31 -0.31
76 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 0.63 0.3 -0.31
77 AT2G36320 A20/AN1-like zinc finger family protein 0.62 0.32 -0.29
78 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.62 0.3 -0.3
79 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 0.62 0.31 -0.33
80 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily -0.62 0.31 -0.3
81 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.62 0.32 -0.3
82 AT3G07000 Cysteine/Histidine-rich C1 domain family protein 0.62 0.32 -0.29
83 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.32
84 AT4G17460 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT1 0.62 0.31 -0.31
85 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.62 0.32 -0.31
86 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.29 -0.35
87 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 -0.61 0.3 -0.3
88 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.61 0.33 -0.31
89 AT4G37160 SKU5 similar 15 SKU5 similar 15 0.61 0.31 -0.31
90 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.61 0.32 -0.34
91 AT1G44760 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.61 0.31 -0.33
92 AT4G31320 SAUR-like auxin-responsive protein family 0.61 0.29 -0.32
93 AT5G54020 Cysteine/Histidine-rich C1 domain family protein 0.61 0.31 -0.3
94 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.61 0.31 -0.3
95 AT1G47750 peroxin 11A peroxin 11A 0.61 0.32 -0.3
96 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.6 0.32 -0.34
97 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.6 0.34 -0.33
98 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.6 0.32 -0.32
99 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.6 0.33 -0.3
100 AT5G62040 PEBP (phosphatidylethanolamine-binding protein) family
protein		 brother of FT and TFL1 -0.6 0.3 -0.32
101 AT4G34040 RING/U-box superfamily protein -0.6 0.31 -0.29
102 AT3G27660 oleosin 4 OLEOSIN 3, oleosin 4 -0.6 0.34 -0.31
103 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 -0.6 0.3 -0.3
104 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.6 0.3 -0.3
105 ATCG01100 NADH dehydrogenase family protein NDHA -0.59 0.33 -0.33
106 AT4G07510 transposable element gene -0.59 0.29 -0.32
107 AT3G18660 plant glycogenin-like starch initiation protein 1 glucuronic acid substitution of
xylan 1, plant glycogenin-like
starch initiation protein 1		 -0.59 0.33 -0.28
108 AT2G46690 SAUR-like auxin-responsive protein family -0.58 0.31 -0.32
109 AT4G04165 transposable element gene -0.58 0.3 -0.35
110 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD -0.58 0.32 -0.3
111 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.58 0.34 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0182 MST_2996.4 - - - -0.76 0.5 -0.45
113 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		0.76 0.46 -0.45 C0239
114 C0169 MST_2105.7 - - - -0.74 0.49 -0.45
115 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.73 0.45 -0.48 C0227