AGICode | AT2G02670 |
Description | pseudogene, hypothetical protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G02670 | pseudogene, hypothetical protein | 1 | 0.31 | -0.34 | |||
2 | AT1G08340 | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain |
-0.7 | 0.32 | -0.31 | |||
3 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.33 | -0.31 | |||
4 | AT4G13420 | high affinity K+ transporter 5 | ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 |
0.67 | 0.32 | -0.31 | ||
5 | AT1G48095 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.27 | |||
6 | AT4G35370 | Transducin/WD40 repeat-like superfamily protein | 0.65 | 0.3 | -0.32 | |||
7 | AT3G04900 | Heavy metal transport/detoxification superfamily protein | -0.65 | 0.32 | -0.3 | |||
8 | AT1G33350 | Pentatricopeptide repeat (PPR) superfamily protein | 0.63 | 0.32 | -0.3 | |||
9 | AT1G73690 | cyclin-dependent kinase D1;1 | CYCLIN-DEPENDENT KINASE D1, CAK3AT, cyclin-dependent kinase D1;1 |
-0.63 | 0.3 | -0.32 | ||
10 | AT5G40520 | unknown protein; Has 3679 Blast hits to 2474 proteins in 390 species: Archae - 10; Bacteria - 571; Metazoa - 1012; Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes - 1270 (source: NCBI BLink). |
0.63 | 0.32 | -0.32 | |||
11 | AT1G73510 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.32 | -0.32 | |||
12 | AT4G24580 | Rho GTPase activation protein (RhoGAP) with PH domain | ROP1 ENHANCER 1 | -0.62 | 0.3 | -0.3 | ||
13 | AT2G37440 | DNAse I-like superfamily protein | -0.62 | 0.3 | -0.31 | |||
14 | AT2G23440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 | |||
15 | AT2G19630 | F-box and associated interaction domains-containing protein | 0.61 | 0.31 | -0.31 | |||
16 | AT4G11480 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 |
0.61 | 0.31 | -0.32 | ||
17 | AT3G61700 | Plant protein 1589 of unknown function | 0.61 | 0.29 | -0.34 | |||
18 | AT5G19810 | Proline-rich extensin-like family protein | -0.6 | 0.3 | -0.32 | |||
19 | AT2G23920 | unknown protein; INVOLVED IN: N-terminal protein myristoylation; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.31 | |||
20 | AT1G35500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35614.1); Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.28 | -0.31 | |||
21 | AT4G15890 | binding | 0.59 | 0.32 | -0.3 | |||
22 | AT5G64720 | Protein of unknown function (DUF1278) | 0.58 | 0.3 | -0.31 | |||
23 | AT3G50320 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.32 | |||
24 | AT5G20170 | RNA polymerase II transcription mediators | 0.58 | 0.31 | -0.3 | |||
25 | AT3G26790 | AP2/B3-like transcriptional factor family protein | FUSCA 3 | -0.57 | 0.3 | -0.31 | ||
26 | AT2G22340 | unknown protein; Has 56 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.3 | -0.31 | |||
27 | AT1G48290 | transposable element gene | 0.57 | 0.3 | -0.31 | |||
28 | AT2G45230 | transposable element gene | 0.57 | 0.31 | -0.29 | |||
29 | AT1G04560 | AWPM-19-like family protein | -0.57 | 0.31 | -0.32 | |||
30 | AT1G09155 | phloem protein 2-B15 | phloem protein 2-B15, phloem protein 2-B15 |
-0.56 | 0.3 | -0.33 | ||
31 | AT1G68610 | PLANT CADMIUM RESISTANCE 11 | PLANT CADMIUM RESISTANCE 11 | -0.56 | 0.31 | -0.33 | ||
32 | AT5G66430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.56 | 0.33 | -0.31 | |||
33 | AT5G49750 | Leucine-rich repeat (LRR) family protein | -0.56 | 0.3 | -0.32 | |||
34 | AT1G74740 | calcium-dependent protein kinase 30 | ATCPK30, CALCIUM-DEPENDENT PROTEIN KINASE 1A, calcium-dependent protein kinase 30 |
-0.56 | 0.32 | -0.31 | ||
35 | AT1G47485 | Encodes CEP1, a 15-amino-acid peptide, which is mainly expressed in the lateral root primordia. When overexpressed or externally applied, CEP1 arrests root growth. CEP1 is a candidate for a novel peptide plant hormone. |
-0.56 | 0.31 | -0.31 | |||
36 | AT1G16650 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.55 | 0.32 | -0.31 | |||
37 | AT5G54130 | Calcium-binding endonuclease/exonuclease/phosphatase family | 0.55 | 0.31 | -0.32 | |||
38 | AT1G49850 | RING/U-box superfamily protein | -0.55 | 0.31 | -0.32 | |||
39 | AT1G57906 | unknown protein; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.32 | -0.3 | |||
40 | AT1G58330 | transcription factor-related | ZW2 | -0.55 | 0.33 | -0.31 | ||
41 | AT5G51930 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
0.55 | 0.33 | -0.3 | |||
42 | AT2G36440 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.32 | -0.32 | |||
43 | AT1G36230 | unknown protein; Has 5786 Blast hits to 627 proteins in 69 species: Archae - 0; Bacteria - 5701; Metazoa - 46; Fungi - 22; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.55 | 0.3 | -0.32 | |||
44 | AT2G01670 | nudix hydrolase homolog 17 | nudix hydrolase homolog 17, nudix hydrolase homolog 17 |
0.55 | 0.32 | -0.33 | ||
45 | AT3G51710 | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain |
-0.55 | 0.31 | -0.32 | |||
46 | AT3G45940 | Glycosyl hydrolases family 31 protein | 0.54 | 0.33 | -0.31 | |||
47 | AT1G54700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724); BEST Arabidopsis thaliana protein match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.31 | |||
48 | AT5G38380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.54 | 0.3 | -0.33 | |||
49 | AT1G10240 | FAR1-related sequence 11 | FAR1-related sequence 11 | 0.54 | 0.29 | -0.3 | ||
50 | AT4G15755 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.53 | 0.31 | -0.31 | |||
51 | AT5G24940 | Protein phosphatase 2C family protein | -0.53 | 0.32 | -0.33 | |||
52 | AT2G27870 | transposable element gene | -0.53 | 0.35 | -0.3 | |||
53 | AT1G59800 | Cullin family protein | -0.53 | 0.29 | -0.32 | |||
54 | AT5G41820 | RAB geranylgeranyl transferase alpha subunit 2 | RAB geranylgeranyl transferase alpha subunit 2, RAB geranylgeranyl transferase alpha subunit 2 |
0.53 | 0.29 | -0.31 | ||
55 | AT1G22110 | structural constituent of ribosome | -0.53 | 0.32 | -0.32 | |||
56 | AT5G09490 | Ribosomal protein S19 family protein | -0.53 | 0.31 | -0.32 | |||
57 | AT2G29110 | glutamate receptor 2.8 | glutamate receptor 2.8, GLR2.8, glutamate receptor 2.8 |
0.52 | 0.3 | -0.32 | ||
58 | AT5G19490 | Histone superfamily protein | -0.52 | 0.32 | -0.33 | |||
59 | AT2G17880 | Chaperone DnaJ-domain superfamily protein | -0.52 | 0.34 | -0.3 | |||
60 | AT3G22870 | F-box and associated interaction domains-containing protein | -0.52 | 0.3 | -0.33 | |||
61 | AT4G03810 | transposable element gene | -0.51 | 0.32 | -0.3 | |||
62 | AT2G11680 | transposable element gene | -0.5 | 0.3 | -0.32 | |||
63 | AT3G32050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14780.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.31 | -0.31 |