AGICode | AT2G30170 |
Description | Protein phosphatase 2C family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G30170 | Protein phosphatase 2C family protein | 1 | 0.3 | -0.33 | |||
2 | AT1G52510 | alpha/beta-Hydrolases superfamily protein | 0.87 | 0.3 | -0.31 | |||
3 | AT5G45170 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.85 | 0.33 | -0.33 | |||
4 | AT2G38780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.82 | 0.32 | -0.32 | |||
5 | AT1G01790 | K+ efflux antiporter 1 | K+ EFFLUX ANTIPORTER 1, K+ efflux antiporter 1 |
0.82 | 0.33 | -0.31 | ||
6 | AT1G79790 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
Arabidopsis thaliana chloroplast FMN hydrolase 1, flavin mononucleotide hydrolase 1 |
0.82 | 0.29 | -0.31 | ||
7 | AT1G65260 | plastid transcriptionally active 4 | plastid transcriptionally active 4, VESICLE-INDUCING PROTEIN IN PLASTIDS 1 |
0.82 | 0.3 | -0.3 | ||
8 | AT5G62790 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, PIGMENT-DEFECTIVE EMBRYO 129 |
0.81 | 0.32 | -0.33 | ||
9 | AT3G27925 | DegP protease 1 | DegP protease 1, DegP protease 1 | 0.81 | 0.31 | -0.31 | ||
10 | AT5G27560 | Domain of unknown function (DUF1995) | 0.81 | 0.33 | -0.31 | |||
11 | AT2G26540 | uroporphyrinogen-III synthase family protein | DOMAIN OF UNKNOWN FUNCTION 724 3, ARABIDOPSIS THALIANA UROPORPHYRINOGEN III SYNTHASE, DOMAIN OF UNKNOWN FUNCTION 724 3, HEMD, UROPORPHYRINOGEN III SYNTHASE |
0.8 | 0.32 | -0.3 | ||
12 | AT2G34860 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | embryo sac development arrest 3 | 0.8 | 0.33 | -0.31 | ||
13 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.8 | 0.33 | -0.33 | |||
14 | AT2G39690 | Protein of unknown function, DUF547 | 0.8 | 0.32 | -0.32 | |||
15 | AT4G14210 | phytoene desaturase 3 | PIGMENT DEFECTIVE 226, PHYTOENE DESATURASE, phytoene desaturase 3 |
0.8 | 0.36 | -0.3 | ||
16 | AT1G77490 | thylakoidal ascorbate peroxidase | thylakoidal ascorbate peroxidase | 0.79 | 0.3 | -0.33 | ||
17 | AT1G04620 | coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
7-hydroxymethyl chlorophyll a (HMChl) reductase |
0.79 | 0.31 | -0.31 | ||
18 | AT5G12130 | integral membrane TerC family protein | TELLURITE RESISTANCE C, PIGMENT DEFECTIVE 149 |
0.79 | 0.31 | -0.31 | ||
19 | AT5G22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | 0.79 | 0.3 | -0.31 | |||
20 | AT2G04700 | ferredoxin thioredoxin reductase catalytic beta chain family protein |
0.79 | 0.3 | -0.31 | |||
21 | AT5G63060 | Sec14p-like phosphatidylinositol transfer family protein | 0.79 | 0.29 | -0.32 | |||
22 | AT2G44930 | Plant protein of unknown function (DUF247) | 0.78 | 0.32 | -0.32 | |||
23 | AT5G03880 | Thioredoxin family protein | 0.78 | 0.32 | -0.29 | |||
24 | AT2G01110 | Sec-independent periplasmic protein translocase | ALBINO AND PALE GREEN 2, PGA2, TWIN-ARGININE TRANSLOCATION C, unfertilized embryo sac 3 |
0.78 | 0.33 | -0.31 | ||
25 | AT1G29700 | Metallo-hydrolase/oxidoreductase superfamily protein | 0.77 | 0.32 | -0.32 | |||
26 | AT1G32220 | NAD(P)-binding Rossmann-fold superfamily protein | 0.77 | 0.31 | -0.32 | |||
27 | AT3G15520 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.77 | 0.32 | -0.31 | |||
28 | AT5G35170 | adenylate kinase family protein | 0.76 | 0.33 | -0.3 | |||
29 | AT1G35340 | ATP-dependent protease La (LON) domain protein | 0.76 | 0.32 | -0.31 | |||
30 | AT3G10350 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.75 | 0.32 | -0.33 | |||
31 | AT2G31040 | ATP synthase protein I -related | 0.75 | 0.28 | -0.31 | |||
32 | AT4G28706 | pfkB-like carbohydrate kinase family protein | 0.75 | 0.31 | -0.33 | |||
33 | AT5G04440 | Protein of unknown function (DUF1997) | 0.75 | 0.31 | -0.33 | |||
34 | AT2G17340 | Uncharacterised conserved protein (UCP030210) | 0.75 | 0.3 | -0.31 | |||
35 | AT4G33520 | P-type ATP-ase 1 | Arabidopsis thaliana heavy metal ATPase 6, HEAVY METAL ATPASE 6, P-type ATP-ase 1 |
0.74 | 0.3 | -0.32 | ||
36 | AT1G69970 | CLAVATA3/ESR-RELATED 26 | CLAVATA3/ESR-RELATED 26 | 0.74 | 0.31 | -0.31 | ||
37 | AT5G38660 | acclimation of photosynthesis to environment | ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT |
0.74 | 0.33 | -0.32 | ||
38 | AT1G06690 | NAD(P)-linked oxidoreductase superfamily protein | 0.74 | 0.31 | -0.31 | |||
39 | AT1G09795 | ATP phosphoribosyl transferase 2 | ATP phosphoribosyl transferase 2, ATP phosphoribosyl transferase 2, HISN1B |
0.74 | 0.3 | -0.33 | ||
40 | AT5G04900 | NYC1-like | NYC1-like | 0.74 | 0.33 | -0.33 | ||
41 | AT4G17040 | CLP protease R subunit 4 | CLP protease R subunit 4, happy on norflurazon 5 |
0.74 | 0.31 | -0.32 | ||
42 | AT2G03390 | uvrB/uvrC motif-containing protein | 0.74 | 0.33 | -0.31 | |||
43 | AT3G50790 | esterase/lipase/thioesterase family protein | 0.74 | 0.3 | -0.3 | |||
44 | AT2G20870 | cell wall protein precursor, putative | 0.74 | 0.3 | -0.33 | |||
45 | AT5G14970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). |
0.74 | 0.33 | -0.31 | |||
46 | AT5G40160 | Ankyrin repeat family protein | EMBRYO DEFECTIVE 139, embryo defective 506 |
0.74 | 0.3 | -0.34 | ||
47 | AT1G70610 | transporter associated with antigen processing protein 1 | ATP-binding cassette B26, transporter associated with antigen processing protein 1, transporter associated with antigen processing protein 1 |
0.73 | 0.3 | -0.28 | ||
48 | AT2G03390 | uvrB/uvrC motif-containing protein | 0.73 | 0.32 | -0.3 | |||
49 | AT5G60600 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | CHLOROPLAST BIOGENESIS 4, CONSTITUTIVE SUBTILISIN 3, GCPE, 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, ISPG |
0.73 | 0.32 | -0.32 | ||
50 | AT5G05200 | Protein kinase superfamily protein | 0.73 | 0.3 | -0.33 | |||
51 | AT4G36530 | alpha/beta-Hydrolases superfamily protein | 0.72 | 0.3 | -0.31 | |||
52 | AT3G23310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
0.72 | 0.31 | -0.31 | |||
53 | AT3G05350 | Metallopeptidase M24 family protein | 0.72 | 0.29 | -0.3 | |||
54 | AT5G20220 | zinc knuckle (CCHC-type) family protein | 0.72 | 0.32 | -0.31 | |||
55 | AT1G31800 | cytochrome P450, family 97, subfamily A, polypeptide 3 | cytochrome P450, family 97, subfamily A, polypeptide 3, LUTEIN DEFICIENT 5 |
0.71 | 0.31 | -0.33 | ||
56 | AT2G02410 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.71 | 0.33 | -0.33 | |||
57 | AT1G77930 | Chaperone DnaJ-domain superfamily protein | 0.71 | 0.32 | -0.31 | |||
58 | AT4G26860 | Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
0.71 | 0.32 | -0.32 | |||
59 | AT5G50110 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.71 | 0.31 | -0.33 | |||
60 | AT1G25290 | RHOMBOID-like protein 10 | RHOMBOID-like protein 10, RHOMBOID-like protein 10 |
0.7 | 0.3 | -0.32 | ||
61 | AT5G06130 | chaperone protein dnaJ-related | 0.7 | 0.32 | -0.31 | |||
62 | AT3G11945 | homogentisate prenyltransferase | homogentisate prenyltransferase, homogentisate prenyltransferase, PHYTOENE DESATURATION 2 |
0.7 | 0.31 | -0.32 | ||
63 | AT3G20930 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.7 | 0.3 | -0.3 | |||
64 | AT1G21065 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). |
0.7 | 0.29 | -0.34 | |||
65 | AT1G67280 | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein |
0.7 | 0.32 | -0.33 | |||
66 | AT4G18810 | NAD(P)-binding Rossmann-fold superfamily protein | 0.7 | 0.29 | -0.3 | |||
67 | AT4G32590 | 2Fe-2S ferredoxin-like superfamily protein | 0.69 | 0.34 | -0.31 | |||
68 | AT4G20030 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.69 | 0.32 | -0.3 | |||
69 | AT1G73990 | signal peptide peptidase | signal peptide peptidase, SPPA1 | 0.69 | 0.32 | -0.33 | ||
70 | AT4G25700 | beta-hydroxylase 1 | B1, BETA CAROTENOID HYDROXYLASE 1, beta-hydroxylase 1, chy1 |
0.69 | 0.33 | -0.33 | ||
71 | AT3G03880 | Protein of unknown function (DUF1639) | 0.69 | 0.33 | -0.33 | |||
72 | AT5G43780 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS4 | -0.68 | 0.31 | -0.33 | ||
73 | AT1G76930 | extensin 4 | EXTENSIN 1, extensin 4, extensin 1, extensin 4, OBP3-RESPONSIVE GENE 5 |
-0.68 | 0.31 | -0.29 | ||
74 | AT5G59305 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.68 | 0.32 | -0.31 | |||
75 | AT2G47680 | zinc finger (CCCH type) helicase family protein | -0.67 | 0.33 | -0.3 | |||
76 | AT1G56010 | NAC domain containing protein 1 | Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22, NAC domain containing protein 1 |
-0.65 | 0.32 | -0.31 | ||
77 | AT1G01640 | BTB/POZ domain-containing protein | -0.65 | 0.31 | -0.31 | |||
78 | AT1G67330 | Protein of unknown function (DUF579) | -0.64 | 0.33 | -0.32 | |||
79 | AT1G13970 | Protein of unknown function (DUF1336) | -0.63 | 0.3 | -0.3 | |||
80 | AT3G09690 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.33 | -0.3 | |||
81 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
-0.63 | 0.31 | -0.33 | ||
82 | AT4G28410 | Tyrosine transaminase family protein | -0.63 | 0.33 | -0.33 | |||
83 | AT3G14280 | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.32 | -0.3 | |||
84 | AT4G32870 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.62 | 0.32 | -0.32 | |||
85 | AT5G20240 | K-box region and MADS-box transcription factor family protein |
PISTILLATA | -0.6 | 0.32 | -0.33 | ||
86 | AT1G77130 | plant glycogenin-like starch initiation protein 2 | glucuronic acid substitution of xylan 3, plant glycogenin-like starch initiation protein 2 |
-0.6 | 0.31 | -0.33 | ||
87 | AT1G08320 | bZIP transcription factor family protein | bZIP21, TGACG (TGA) motif-binding protein 9 |
-0.59 | 0.32 | -0.35 | ||
88 | AT3G02940 | myb domain protein 107 | myb domain protein 107, myb domain protein 107 |
-0.58 | 0.28 | -0.33 | ||
89 | AT2G03880 | Pentatricopeptide repeat (PPR) superfamily protein | required for efficiency of mitochondrial editing 1 |
-0.58 | 0.31 | -0.31 | ||
90 | AT2G25810 | tonoplast intrinsic protein 4;1 | tonoplast intrinsic protein 4;1 | -0.58 | 0.3 | -0.31 | ||
91 | AT3G50190 | Plant protein of unknown function (DUF247) | -0.57 | 0.28 | -0.32 | |||
92 | AT5G60250 | zinc finger (C3HC4-type RING finger) family protein | -0.57 | 0.33 | -0.33 | |||
93 | AT2G41810 | Protein of unknown function, DUF642 | -0.57 | 0.31 | -0.34 | |||
94 | AT5G55170 | small ubiquitin-like modifier 3 | ATSUMO3, SMALL UBIQUITIN-LIKE MODIFIER 3, SMALL UBIQUITIN-LIKE MODIFIER 3, small ubiquitin-like modifier 3 |
-0.57 | 0.32 | -0.33 | ||
95 | AT5G40840 | Rad21/Rec8-like family protein | Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 |
-0.56 | 0.31 | -0.32 | ||
96 | AT2G03770 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.33 | -0.31 | |||
97 | AT1G01010 | NAC domain containing protein 1 | NAC domain containing protein 1, NAC domain containing protein 1 |
-0.54 | 0.3 | -0.32 | ||
98 | AT3G18360 | VQ motif-containing protein | -0.53 | 0.3 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
99 | C0204 | Phosphatidylglycerol-34:2 | - | Phosphatidylglycerol-34:2 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
0.86 | 0.42 | -0.44 | ||
100 | C0153 | Monogalactosyldiacylgycerol-34:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.76 | 0.45 | -0.42 | ||
101 | C0121 | Isoheptylglucosinolate | - | - | - | -0.75 | 0.44 | -0.45 | ||
102 | C0227 | Ribose | D-Ribose | D-Ribose | ribose degradation, guanosine nucleotides degradation I, pyrimidine salvage pathway, pyridine nucleotide cycling (plants), adenine and adenosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage II, cis-zeatin biosynthesis, adenosine nucleotides degradation I, pyrimidine ribonucleosides degradation II |
-0.74 | 0.43 | -0.44 | ||
103 | C0171 | MST_2182.9 | - | - | - | 0.72 | 0.43 | -0.45 | ||
104 | C0230 | Rutin | - | - | polyphenol biosynthesis | -0.67 | 0.44 | -0.43 | ||
105 | C0035 | 4-Methoxyindol-3-ylmethylglucosinolate | - | 4-Methoxy-3-indolylmethyl glucosinolate | glucosinolate biosynthesis from tryptophan, indole glucosinolate breakdown (active in intact plant cell) |
-0.62 | 0.48 | -0.44 | ||
106 | C0187 | Neoeriocitrin | - | - | - | -0.59 | 0.47 | -0.43 |