AGICode | AT2G30120 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G30120 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). |
1 | 0.32 | -0.34 | |||
2 | AT5G41340 | ubiquitin conjugating enzyme 4 | UBIQUITIN CONJUGATING ENZYME 4, ubiquitin conjugating enzyme 4 |
0.77 | 0.32 | -0.31 | ||
3 | AT4G25770 | alpha/beta-Hydrolases superfamily protein | 0.74 | 0.31 | -0.31 | |||
4 | AT4G20410 | gamma-soluble NSF attachment protein | GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN, gamma-soluble NSF attachment protein |
0.73 | 0.32 | -0.3 | ||
5 | AT3G16785 | phospholipase D P1 | PHOSPHOLIPASE D ZETA 1, phospholipase D P1, PHOSPHOLIPASE D ZETA1, PLDZETA1 |
0.71 | 0.31 | -0.31 | ||
6 | AT3G57900 | unknown protein; Has 22 Blast hits to 22 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.31 | -0.32 | |||
7 | AT5G09230 | sirtuin 2 | SIRTUIN 2, sirtuin 2 | 0.71 | 0.31 | -0.32 | ||
8 | AT2G01710 | Chaperone DnaJ-domain superfamily protein | 0.71 | 0.33 | -0.3 | |||
9 | AT5G02790 | Glutathione S-transferase family protein | Glutathione transferase L3 | 0.7 | 0.32 | -0.32 | ||
10 | AT2G25580 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.7 | 0.32 | -0.31 | |||
11 | AT5G59680 | Leucine-rich repeat protein kinase family protein | -0.7 | 0.32 | -0.32 | |||
12 | AT2G27960 | cyclin-dependent kinase-subunit 1 | cyclin-dependent kinase-subunit 1, CKS1AT |
0.7 | 0.3 | -0.3 | ||
13 | AT5G07270 | XB3 ortholog 3 in Arabidopsis thaliana | XB3 ortholog 3 in Arabidopsis thaliana |
0.69 | 0.33 | -0.32 | ||
14 | AT2G28250 | Protein kinase superfamily protein | NCRK | -0.69 | 0.33 | -0.33 | ||
15 | AT1G59760 | RNA helicase, ATP-dependent, SK12/DOB1 protein | AtMTR4, homolog of yeast MTR4 | -0.69 | 0.32 | -0.32 | ||
16 | AT5G02310 | proteolysis 6 | proteolysis 6 | 0.69 | 0.32 | -0.33 | ||
17 | AT1G17090 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.3 | |||
18 | AT5G61500 | autophagy 3 (APG3) | ATATG3, ATG3 | 0.69 | 0.34 | -0.31 | ||
19 | AT1G23260 | MMS ZWEI homologue 1 | MMS ZWEI homologue 1, UBIQUITIN E2 VARIANT 1A |
0.69 | 0.32 | -0.3 | ||
20 | AT3G27000 | actin related protein 2 | actin related protein 2, ACTIN RELATED PROTEIN 2, WURM |
0.69 | 0.31 | -0.32 | ||
21 | AT1G60850 | DNA-directed RNA polymerase family protein | AAC42, ATRPAC42 | -0.68 | 0.32 | -0.35 | ||
22 | AT1G55300 | TBP-associated factor 7 | TBP-associated factor 7 | 0.68 | 0.31 | -0.33 | ||
23 | AT2G38880 | nuclear factor Y, subunit B1 | HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, NUCLEAR FACTOR Y SUBUNIT B1, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3A, nuclear factor Y, subunit B1 |
0.68 | 0.31 | -0.3 | ||
24 | AT1G26300 | BSD domain-containing protein | 0.68 | 0.32 | -0.33 | |||
25 | AT2G36550 | CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits to 91 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.68 | 0.33 | -0.32 | |||
26 | AT1G49030 | PLAC8 family protein | -0.68 | 0.31 | -0.32 | |||
27 | AT3G47850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.68 | 0.3 | -0.32 | |||
28 | AT4G37170 | Pentatricopeptide repeat (PPR) superfamily protein | -0.68 | 0.32 | -0.31 | |||
29 | AT2G27140 | HSP20-like chaperones superfamily protein | 0.68 | 0.3 | -0.33 | |||
30 | AT4G29420 | F-box/RNI-like superfamily protein | 0.68 | 0.32 | -0.33 | |||
31 | AT5G03840 | PEBP (phosphatidylethanolamine-binding protein) family protein |
TERMINAL FLOWER 1, TERMINAL FLOWER 1 |
-0.68 | 0.31 | -0.32 | ||
32 | AT4G27010 | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
EMBRYO DEFECTIVE 2788 | -0.67 | 0.3 | -0.31 | ||
33 | AT1G17410 | Nucleoside diphosphate kinase family protein | 0.67 | 0.32 | -0.31 | |||
34 | AT5G42960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.67 | 0.32 | -0.3 | |||
35 | AT1G08110 | lactoylglutathione lyase family protein / glyoxalase I family protein |
0.67 | 0.33 | -0.31 | |||
36 | AT1G76870 | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). |
-0.67 | 0.29 | -0.31 | |||
37 | AT2G36680 | Modifier of rudimentary (Mod(r)) protein | 0.67 | 0.33 | -0.31 | |||
38 | AT1G03100 | Pentatricopeptide repeat (PPR) superfamily protein | -0.67 | 0.31 | -0.33 | |||
39 | AT2G23360 | Plant protein of unknown function (DUF869) | -0.66 | 0.31 | -0.34 | |||
40 | AT1G07745 | homolog of RAD51 D | ATRAD51D, homolog of RAD51 D, SUPPRESOR OF SNI1 |
0.66 | 0.33 | -0.33 | ||
41 | AT3G55150 | exocyst subunit exo70 family protein H1 | exocyst subunit exo70 family protein H1, exocyst subunit exo70 family protein H1 |
-0.66 | 0.3 | -0.33 | ||
42 | AT1G76930 | extensin 4 | EXTENSIN 1, extensin 4, extensin 1, extensin 4, OBP3-RESPONSIVE GENE 5 |
-0.66 | 0.29 | -0.32 | ||
43 | AT3G17800 | Protein of unknown function (DUF760) | 0.66 | 0.31 | -0.32 | |||
44 | AT1G17250 | receptor like protein 3 | receptor like protein 3, receptor like protein 3 |
-0.66 | 0.32 | -0.33 | ||
45 | AT1G16480 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.66 | 0.3 | -0.31 | |||
46 | AT2G15130 | Plant basic secretory protein (BSP) family protein | -0.66 | 0.28 | -0.31 | |||
47 | AT5G48300 | ADP glucose pyrophosphorylase 1 | ADP glucose pyrophosphorylase 1, ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1 |
0.66 | 0.33 | -0.31 | ||
48 | AT3G51250 | Senescence/dehydration-associated protein-related | 0.65 | 0.3 | -0.32 | |||
49 | AT2G36060 | MMS ZWEI homologue 3 | MMS ZWEI homologue 3, UBIQUITIN E2 VARIANT 1C |
0.65 | 0.31 | -0.33 | ||
50 | AT1G48670 | auxin-responsive GH3 family protein | -0.65 | 0.31 | -0.33 | |||
51 | AT3G49890 | unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.65 | 0.33 | -0.32 | |||
52 | AT2G31900 | myosin-like protein XIF | MYOSIN 5, MYOSIN XI F, myosin-like protein XIF |
-0.65 | 0.33 | -0.31 | ||
53 | AT2G20710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.65 | 0.31 | -0.33 | |||
54 | AT5G40100 | Disease resistance protein (TIR-NBS-LRR class) family | -0.65 | 0.28 | -0.3 | |||
55 | AT5G65090 | DNAse I-like superfamily protein | BRISTLED 1, DEFORMED ROOT HAIRS 4, MRH3 |
-0.65 | 0.32 | -0.32 | ||
56 | AT5G36950 | DegP protease 10 | DegP protease 10 | -0.65 | 0.3 | -0.3 | ||
57 | AT3G13820 | F-box and associated interaction domains-containing protein | -0.65 | 0.31 | -0.32 | |||
58 | AT5G44330 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.65 | 0.32 | -0.31 | |||
59 | AT1G14400 | ubiquitin carrier protein 1 | ATUBC1, ubiquitin carrier protein 1, UBIQUITIN CONJUGATING ENZYME 1 |
0.65 | 0.32 | -0.33 | ||
60 | AT2G43480 | Peroxidase superfamily protein | -0.65 | 0.31 | -0.33 | |||
61 | AT1G17730 | vacuolar protein sorting 46.1 | CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1B, vacuolar protein sorting 46.1 |
0.65 | 0.33 | -0.31 | ||
62 | AT5G25160 | zinc finger protein 3 | zinc finger protein 3 | -0.65 | 0.32 | -0.33 | ||
63 | AT4G04050 | transposable element gene | -0.65 | 0.33 | -0.32 | |||
64 | AT2G23410 | cis-prenyltransferase | cis-prenyltransferase, cis-prenyltransferase |
-0.65 | 0.29 | -0.36 | ||
65 | AT4G27690 | vacuolar protein sorting 26B | vacuolar protein sorting 26B | 0.64 | 0.3 | -0.31 | ||
66 | AT5G08600 | U3 ribonucleoprotein (Utp) family protein | -0.64 | 0.31 | -0.32 | |||
67 | AT5G17960 | Cysteine/Histidine-rich C1 domain family protein | -0.64 | 0.31 | -0.32 | |||
68 | AT1G39430 | transposable element gene | -0.64 | 0.32 | -0.33 | |||
69 | AT4G27980 | Domain of unknown function (DUF3444) | -0.64 | 0.32 | -0.31 | |||
70 | AT3G31915 | transposable element gene | 0.64 | 0.28 | -0.32 | |||
71 | AT1G14570 | UBX domain-containing protein | 0.63 | 0.3 | -0.31 | |||
72 | AT2G18820 | transposable element gene | -0.63 | 0.32 | -0.33 | |||
73 | AT1G32030 | Domain of unknown function (DUF313) | -0.63 | 0.29 | -0.33 | |||
74 | AT4G03840 | transposable element gene | 0.63 | 0.32 | -0.3 | |||
75 | AT1G23750 | Nucleic acid-binding, OB-fold-like protein | 0.63 | 0.33 | -0.33 | |||
76 | AT4G39110 | Malectin/receptor-like protein kinase family protein | -0.63 | 0.31 | -0.34 | |||
77 | AT2G40220 | Integrase-type DNA-binding superfamily protein | ABA INSENSITIVE 4, ATABI4, GLUCOSE INSENSITIVE 6, IMPAIRED SUCROSE INDUCTION 3, SALOBRENO 5, SUGAR-INSENSITIVE 5, SUCROSE UNCOUPLED 6 |
-0.63 | 0.32 | -0.31 | ||
78 | AT5G13150 | exocyst subunit exo70 family protein C1 | exocyst subunit exo70 family protein C1, exocyst subunit exo70 family protein C1 |
-0.63 | 0.33 | -0.33 | ||
79 | AT1G69850 | nitrate transporter 1:2 | nitrate transporter 1:2, nitrate transporter 1:2, NTL1 |
-0.63 | 0.32 | -0.33 | ||
80 | AT5G50390 | Pentatricopeptide repeat (PPR-like) superfamily protein | EMBRYO DEFECTIVE 3141 | -0.63 | 0.3 | -0.3 | ||
81 | AT1G75340 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.63 | 0.3 | -0.31 | |||
82 | AT1G51690 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
0.63 | 0.31 | -0.33 | ||
83 | AT1G62700 | Arabidopsis NAC domain containing protein 26 | Arabidopsis NAC domain containing protein 26, VASCULAR RELATED NAC-DOMAIN PROTEIN 5 |
0.63 | 0.3 | -0.32 | ||
84 | AT5G46310 | WRKY family transcription factor | -0.63 | 0.32 | -0.31 | |||
85 | AT5G37680 | ADP-ribosylation factor-like A1A | ADP-ribosylation factor-like A1A, ADP-ribosylation factor-like A1A |
0.63 | 0.29 | -0.34 | ||
86 | AT1G14850 | nucleoporin 155 | nucleoporin 155 | -0.62 | 0.3 | -0.3 | ||
87 | AT2G05810 | ARM repeat superfamily protein | -0.62 | 0.3 | -0.32 | |||
88 | AT1G53270 | ABC-2 type transporter family protein | ATP-binding cassette G10 | -0.62 | 0.33 | -0.35 | ||
89 | AT5G09500 | Ribosomal protein S19 family protein | -0.62 | 0.33 | -0.33 | |||
90 | AT5G51520 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.62 | 0.31 | -0.32 | |||
91 | AT1G71420 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.33 | -0.33 | |||
92 | AT3G44510 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.33 | -0.32 | |||
93 | AT2G27750 | Surfeit locus protein 6 | -0.61 | 0.32 | -0.34 | |||
94 | AT1G15460 | HCO3- transporter family | ARABIDOPSIS THALIANA REQUIRES HIGH BORON 4, REQUIRES HIGH BORON 4 |
-0.61 | 0.3 | -0.31 | ||
95 | AT1G21340 | Dof-type zinc finger DNA-binding family protein | -0.61 | 0.3 | -0.31 | |||
96 | AT3G46710 | NB-ARC domain-containing disease resistance protein | -0.61 | 0.32 | -0.32 | |||
97 | AT5G58610 | PHD finger transcription factor, putative | -0.61 | 0.33 | -0.31 | |||
98 | AT1G68150 | WRKY DNA-binding protein 9 | ATWRKY9, WRKY DNA-binding protein 9 |
-0.61 | 0.29 | -0.32 | ||
99 | AT2G11360 | transposable element gene | -0.6 | 0.32 | -0.31 | |||
100 | AT1G50910 | unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
101 | AT3G49190 | O-acyltransferase (WSD1-like) family protein | -0.6 | 0.3 | -0.32 | |||
102 | AT4G22770 | AT hook motif DNA-binding family protein | -0.6 | 0.28 | -0.34 | |||
103 | AT2G28260 | cyclic nucleotide-gated channel 15 | cyclic nucleotide-gated channel 15, cyclic nucleotide-gated channel 15 |
-0.6 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
104 | C0018 | sn-Glycerol-3-phosphate | D,L-sn-Glycerol-3-phosphate | sn-Glycerol-3-phosphate | CDP-diacylglycerol biosynthesis II, phosphatidylglycerol biosynthesis II (non-plastidic), triacylglycerol biosynthesis, glycerol degradation IV, glycerol-3-phosphate shuttle, a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate, CDP-diacylglycerol biosynthesis I, cardiolipin biosynthesis II, phosphatidylglycerol biosynthesis I (plastidic), sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate, an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate |
0.64 | 0.46 | -0.47 | ||
105 | C0035 | 4-Methoxyindol-3-ylmethylglucosinolate | - | 4-Methoxy-3-indolylmethyl glucosinolate | glucosinolate biosynthesis from tryptophan, indole glucosinolate breakdown (active in intact plant cell) |
-0.62 | 0.45 | -0.39 |