AT2G30200 : EMBRYO DEFECTIVE 3147
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G30200
Description catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 1 0.32 -0.32
2 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.92 0.3 -0.32
3 AT3G28460 methyltransferases 0.91 0.32 -0.32
4 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.91 0.31 -0.31
5 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.91 0.3 -0.32
6 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.91 0.33 -0.32
7 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.91 0.28 -0.29
8 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.91 0.32 -0.34
9 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.9 0.3 -0.31
10 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.9 0.32 -0.32
11 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.9 0.29 -0.35
12 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.9 0.3 -0.33
13 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.9 0.29 -0.32
14 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.9 0.33 -0.29
15 AT2G42070 nudix hydrolase homolog 23 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 23, nudix
hydrolase homolog 23, nudix
hydrolase homolog 23		 0.9 0.31 -0.33
16 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.34 -0.3
17 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.9 0.31 -0.35
18 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.9 0.34 -0.32
19 AT4G15510 Photosystem II reaction center PsbP family protein 0.9 0.31 -0.31
20 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.32 -0.33
21 AT3G58610 ketol-acid reductoisomerase 0.89 0.3 -0.32
22 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.89 0.34 -0.31
23 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.89 0.29 -0.3
24 AT2G36230 Aldolase-type TIM barrel family protein ALBINO AND PALE GREEN 10, HISN3 0.89 0.32 -0.31
25 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.31 -0.33
26 AT2G39670 Radical SAM superfamily protein 0.89 0.29 -0.3
27 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.89 0.32 -0.31
28 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.89 0.3 -0.31
29 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.31 -0.28
30 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.89 0.3 -0.32
31 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.89 0.29 -0.3
32 AT3G25860 2-oxoacid dehydrogenases acyltransferase family protein LTA2, PLASTID E2 SUBUNIT OF
PYRUVATE DECARBOXYLASE		 0.89 0.3 -0.31
33 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.33 -0.34
34 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.89 0.32 -0.34
35 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.32 -0.29
36 AT1G15730 Cobalamin biosynthesis CobW-like protein 0.88 0.33 -0.31
37 AT3G27750 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match is:
Vacuolar sorting protein 9 (VPS9) domain
(TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 EMBRYO DEFECTIVE 3123 0.88 0.33 -0.29
38 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.88 0.31 -0.31
39 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.88 0.33 -0.31
40 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.88 0.32 -0.28
41 AT3G49470 nascent polypeptide-associated complex subunit alpha-like
protein 2		 nascent polypeptide-associated
complex subunit alpha-like protein
2		 0.88 0.29 -0.33
42 AT4G37510 Ribonuclease III family protein 0.88 0.32 -0.3
43 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.88 0.3 -0.32
44 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.88 0.33 -0.31
45 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.88 0.29 -0.31
46 AT4G16980 arabinogalactan-protein family 0.87 0.31 -0.31
47 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.3 -0.32
48 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.87 0.31 -0.32
49 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.87 0.31 -0.31
50 AT5G66530 Galactose mutarotase-like superfamily protein 0.87 0.32 -0.32
51 AT1G72610 germin-like protein 1 A. THALIANA GERMIN-LIKE PROTEIN 1,
germin-like protein 1, GERMIN-LIKE
PROTEIN 1		 0.87 0.31 -0.32
52 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.87 0.33 -0.31
53 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.87 0.31 -0.3
54 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B 0.87 0.31 -0.31
55 AT1G56050 GTP-binding protein-related 0.86 0.33 -0.3
56 AT4G34730 ribosome-binding factor A family protein 0.86 0.31 -0.32
57 AT1G76405 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.86 0.32 -0.29
58 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.86 0.31 -0.33
59 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.86 0.33 -0.31
60 AT5G20040 isopentenyltransferase 9 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 9,
isopentenyltransferase 9		 0.86 0.33 -0.33
61 AT5G10390 Histone superfamily protein 0.86 0.29 -0.32
62 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.86 0.3 -0.31
63 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.86 0.31 -0.29
64 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 0.86 0.31 -0.33
65 AT2G22230 Thioesterase superfamily protein 0.86 0.29 -0.33
66 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.86 0.32 -0.33
67 AT5G59870 histone H2A 6 histone H2A 6 0.86 0.3 -0.31
68 AT4G38860 SAUR-like auxin-responsive protein family 0.86 0.33 -0.29
69 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 0.85 0.31 -0.31
70 AT5G48220 Aldolase-type TIM barrel family protein 0.85 0.32 -0.32
71 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.85 0.33 -0.31
72 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.85 0.31 -0.31
73 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.85 0.34 -0.33
74 AT5G45820 CBL-interacting protein kinase 20 CBL-interacting protein kinase 20,
PROTEIN KINASE 18, SNF1-RELATED
PROTEIN KINASE 3.6		 0.85 0.29 -0.31
75 AT3G42660 transducin family protein / WD-40 repeat family protein 0.85 0.31 -0.31
76 AT4G28210 embryo defective 1923 embryo defective 1923 0.85 0.3 -0.31
77 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.85 0.3 -0.33
78 AT1G21600 plastid transcriptionally active 6 plastid transcriptionally active 6 0.85 0.32 -0.31
79 AT4G25990 CCT motif family protein CIL 0.85 0.31 -0.32
80 AT5G35370 S-locus lectin protein kinase family protein -0.83 0.3 -0.33
81 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.83 0.31 -0.3
82 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.82 0.32 -0.31
83 AT1G63840 RING/U-box superfamily protein -0.82 0.31 -0.31
84 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.82 0.32 -0.33
85 AT1G26930 Galactose oxidase/kelch repeat superfamily protein -0.81 0.31 -0.28
86 AT3G04000 NAD(P)-binding Rossmann-fold superfamily protein -0.81 0.3 -0.31
87 AT1G52080 actin binding protein family AR791 -0.81 0.33 -0.33
88 AT4G14010 ralf-like 32 ralf-like 32 -0.81 0.31 -0.33
89 AT5G58350 with no lysine (K) kinase 4 with no lysine (K) kinase 4, ZIK2 -0.81 0.33 -0.31
90 AT1G20490 AMP-dependent synthetase and ligase family protein -0.8 0.31 -0.29
91 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.8 0.32 -0.33
92 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.8 0.31 -0.32
93 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.79 0.32 -0.32
94 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.79 0.32 -0.29
95 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.79 0.32 -0.34
96 AT1G17490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits
to 45 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.31 -0.28
97 AT5G64250 Aldolase-type TIM barrel family protein -0.79 0.28 -0.32
98 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.79 0.33 -0.32
99 AT5G63970 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.79 0.31 -0.31
100 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.79 0.3 -0.34
101 AT3G26100 Regulator of chromosome condensation (RCC1) family protein -0.79 0.31 -0.32
102 AT5G02170 Transmembrane amino acid transporter family protein -0.79 0.32 -0.35
103 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.78 0.33 -0.32
104 AT4G31240 protein kinase C-like zinc finger protein -0.78 0.32 -0.3
105 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.78 0.31 -0.32
106 AT2G48010 receptor-like kinase in in flowers 3 receptor-like kinase in in flowers
3		 -0.78 0.32 -0.32
107 AT1G03080 kinase interacting (KIP1-like) family protein -0.78 0.28 -0.33
108 AT3G15500 NAC domain containing protein 3 NAC domain containing protein 55,
NAC domain containing protein 3,
NAC domain containing protein 55,
NAC domain containing protein 3		 -0.78 0.32 -0.32
109 AT1G19270 DA1 DA1 -0.78 0.31 -0.32
110 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.78 0.3 -0.31
111 AT3G47730 ATP-binding cassette A2 ATP-binding cassette A2, A.
THALIANA ABC2 HOMOLOG 1, ABC2
homolog 1		 -0.77 0.32 -0.34
112 AT1G27300 unknown protein; Has 54 Blast hits to 54 proteins in 19
species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6;
Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.77 0.33 -0.31
113 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.77 0.31 -0.32
114 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.77 0.3 -0.31
115 AT5G13820 telomeric DNA binding protein 1 ATBP-1, ATBP1, ATTBP1, H-PROTEIN
PROMOTE, telomeric DNA binding
protein 1		 -0.77 0.34 -0.3
116 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.31 -0.31
117 AT3G07560 peroxin 13 ABERRANT PEROXISOME MORPHOLOGY 2,
peroxin 13		 -0.76 0.33 -0.33
118 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.76 0.32 -0.32
119 AT2G31260 autophagy 9 (APG9) autophagy 9, ATAPG9 -0.76 0.32 -0.3
120 AT5G18780 F-box/RNI-like superfamily protein -0.76 0.31 -0.33
121 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.75 0.29 -0.3
122 AT2G39310 jacalin-related lectin 22 jacalin-related lectin 22 -0.75 0.32 -0.31
123 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.75 0.32 -0.29
124 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.75 0.31 -0.32
125 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 -0.75 0.31 -0.34
126 AT2G29065 GRAS family transcription factor -0.75 0.29 -0.33
127 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.75 0.32 -0.32
128 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.75 0.3 -0.3
129 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.75 0.32 -0.31
130 AT3G17250 Protein phosphatase 2C family protein -0.74 0.34 -0.3
131 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase -0.74 0.3 -0.33
132 AT4G10050 esterase/lipase/thioesterase family protein -0.74 0.3 -0.3
133 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.74 0.3 -0.29
134 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.74 0.31 -0.33
135 AT5G28510 beta glucosidase 24 beta glucosidase 24 -0.74 0.32 -0.31
136 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 -0.74 0.32 -0.3