AT2G39990 : Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit F.....
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G39990
Description eukaryotic translation initiation factor 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 1 0.28 -0.32
2 AT5G06360 Ribosomal protein S8e family protein 0.89 0.31 -0.31
3 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.89 0.32 -0.29
4 AT2G44120 Ribosomal protein L30/L7 family protein 0.88 0.32 -0.32
5 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.88 0.3 -0.31
6 AT5G57290 60S acidic ribosomal protein family 0.87 0.31 -0.31
7 AT4G29410 Ribosomal L28e protein family 0.87 0.32 -0.32
8 AT3G09500 Ribosomal L29 family protein 0.87 0.31 -0.32
9 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.29 -0.32
10 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 0.86 0.32 -0.3
11 AT1G34030 Ribosomal protein S13/S18 family 0.86 0.31 -0.32
12 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.86 0.31 -0.32
13 AT3G49180 Transducin/WD40 repeat-like superfamily protein ROOT INITIATION DEFECTIVE 3 0.86 0.32 -0.3
14 AT5G09510 Ribosomal protein S19 family protein 0.86 0.34 -0.3
15 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.86 0.32 -0.32
16 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.86 0.34 -0.31
17 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.86 0.3 -0.31
18 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.85 0.32 -0.31
19 AT2G45710 Zinc-binding ribosomal protein family protein 0.85 0.31 -0.3
20 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.85 0.32 -0.31
21 AT2G44860 Ribosomal protein L24e family protein 0.85 0.32 -0.31
22 AT1G25260 Ribosomal protein L10 family protein 0.85 0.3 -0.31
23 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.85 0.33 -0.33
24 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.85 0.3 -0.3
25 AT2G25210 Ribosomal protein L39 family protein 0.84 0.31 -0.33
26 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.84 0.3 -0.35
27 AT4G28450 nucleotide binding;protein binding 0.84 0.32 -0.32
28 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.84 0.31 -0.32
29 AT3G22230 Ribosomal L27e protein family 0.84 0.3 -0.32
30 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.83 0.31 -0.33
31 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.83 0.3 -0.33
32 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.31 -0.33
33 AT3G05810 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: IGR protein
motif (InterPro:IPR019083); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G26800.1); Has
62 Blast hits to 62 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.83 0.31 -0.31
34 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.83 0.3 -0.31
35 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.83 0.31 -0.31
36 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.82 0.31 -0.3
37 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.82 0.33 -0.31
38 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.82 0.32 -0.34
39 AT3G59540 Ribosomal L38e protein family 0.82 0.31 -0.33
40 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 0.82 0.32 -0.31
41 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.82 0.31 -0.3
42 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.33 -0.33
43 AT2G36160 Ribosomal protein S11 family protein 0.82 0.3 -0.33
44 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.82 0.32 -0.33
45 AT5G23900 Ribosomal protein L13e family protein 0.82 0.31 -0.33
46 AT5G56670 Ribosomal protein S30 family protein 0.82 0.33 -0.32
47 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.82 0.32 -0.31
48 AT1G52930 Ribosomal RNA processing Brix domain protein 0.82 0.29 -0.3
49 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.82 0.32 -0.3
50 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.82 0.31 -0.31
51 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.82 0.3 -0.28
52 AT5G22440 Ribosomal protein L1p/L10e family 0.82 0.31 -0.31
53 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.82 0.3 -0.31
54 AT5G02450 Ribosomal protein L36e family protein 0.82 0.3 -0.33
55 AT2G19740 Ribosomal protein L31e family protein 0.82 0.32 -0.33
56 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.82 0.31 -0.31
57 AT3G13230 RNA-binding KH domain-containing protein 0.82 0.33 -0.32
58 AT3G25940 TFIIB zinc-binding protein 0.81 0.3 -0.3
59 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.81 0.31 -0.32
60 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.81 0.33 -0.31
61 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.81 0.3 -0.32
62 AT4G31985 Ribosomal protein L39 family protein 0.81 0.34 -0.32
63 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.81 0.31 -0.31
64 AT4G15770 RNA binding 0.81 0.31 -0.33
65 AT2G41840 Ribosomal protein S5 family protein 0.81 0.32 -0.31
66 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.81 0.3 -0.32
67 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.81 0.31 -0.31
68 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.81 0.32 -0.31
69 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.81 0.32 -0.32
70 AT2G44510 CDK inhibitor P21 binding protein 0.81 0.32 -0.35
71 AT3G02560 Ribosomal protein S7e family protein 0.81 0.31 -0.31
72 AT2G46230 PIN domain-like family protein 0.8 0.32 -0.32
73 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.8 0.31 -0.33
74 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.3 -0.3
75 AT1G01100 60S acidic ribosomal protein family 0.8 0.33 -0.32
76 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 0.8 0.32 -0.32
77 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.8 0.31 -0.31
78 AT2G32220 Ribosomal L27e protein family 0.8 0.31 -0.34
79 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.8 0.31 -0.33
80 AT1G50920 Nucleolar GTP-binding protein 0.8 0.33 -0.31
81 AT3G62940 Cysteine proteinases superfamily protein 0.8 0.31 -0.33
82 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.8 0.31 -0.3
83 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.8 0.31 -0.32
84 AT2G40420 Transmembrane amino acid transporter family protein -0.79 0.32 -0.31
85 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.79 0.32 -0.33
86 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.77 0.35 -0.35
87 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.75 0.33 -0.32
88 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.74 0.31 -0.33
89 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.32 -0.34
90 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.72 0.31 -0.3
91 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.72 0.32 -0.32
92 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.71 0.32 -0.31
93 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.7 0.34 -0.32
94 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.68 0.3 -0.34
95 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.66 0.3 -0.34
96 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.66 0.3 -0.32
97 AT3G08840 D-alanine--D-alanine ligase family -0.65 0.32 -0.33
98 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.65 0.29 -0.32
99 AT1G19835 Plant protein of unknown function (DUF869) -0.65 0.32 -0.31
100 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.65 0.33 -0.31
101 AT3G56050 Protein kinase family protein -0.64 0.33 -0.31
102 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.64 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.64 0.32 -0.32 C0137
104 C0177 MST_2429.6 - - - -0.64 0.46 -0.44