AT2G40030 : ATNRPD1B
Query Information
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AGICode AT2G40030
Description nuclear RNA polymerase D1B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 1 0.31 -0.32
2 AT5G58620 zinc finger (CCCH-type) family protein -0.75 0.33 -0.3
3 AT2G32010 CVP2 like 1 CVP2 like 1 0.74 0.33 -0.33
4 AT1G14460 AAA-type ATPase family protein 0.73 0.32 -0.31
5 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 0.73 0.3 -0.33
6 AT1G01500 Erythronate-4-phosphate dehydrogenase family protein -0.73 0.31 -0.3
7 AT2G16710 Iron-sulphur cluster biosynthesis family protein -0.73 0.34 -0.32
8 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.73 0.32 -0.3
9 AT4G26520 Aldolase superfamily protein 0.72 0.32 -0.31
10 AT3G19570 Family of unknown function (DUF566) QWRF domain containing 1, SNOWY
COTYLEDON 3		 0.71 0.3 -0.33
11 AT4G27500 proton pump interactor 1 proton pump interactor 1 -0.71 0.3 -0.33
12 AT2G03760 sulphotransferase 12 AtSOT1, sulphotransferase 12,
ARABIDOPSIS THALIANA
SULFOTRANSFERASE 1, RAR047,
sulphotransferase 12, ST,
SULFOTRANSFERASE 1		 -0.71 0.32 -0.29
13 AT3G19640 magnesium transporter 4 magnesium transporter 4, MRS2-3 -0.71 0.32 -0.31
14 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.32 -0.3
15 AT5G59080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G46880.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.3
16 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.69 0.34 -0.34
17 AT1G03780 targeting protein for XKLP2 AtTPX2, targeting protein for
XKLP2		 0.69 0.32 -0.32
18 AT3G53190 Pectin lyase-like superfamily protein 0.69 0.32 -0.3
19 AT1G10730 Clathrin adaptor complexes medium subunit family protein -0.69 0.32 -0.31
20 AT5G54960 pyruvate decarboxylase-2 pyruvate decarboxylase-2 -0.69 0.32 -0.33
21 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 -0.68 0.3 -0.31
22 AT5G49390 LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G06670.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.31 -0.31
23 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 0.68 0.28 -0.34
24 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.68 0.31 -0.33
25 AT3G10300 Calcium-binding EF-hand family protein -0.68 0.3 -0.29
26 AT5G27200 acyl carrier protein 5 acyl carrier protein 5 0.68 0.3 -0.31
27 AT2G30490 cinnamate-4-hydroxylase CINNAMATE 4-HYDROXYLASE,
cinnamate-4-hydroxylase, CYP73A5,
REDUCED EPRDERMAL FLUORESCENCE 3		 -0.67 0.32 -0.3
28 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 -0.67 0.33 -0.32
29 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.33 -0.33
30 AT5G58640 Selenoprotein, Rdx type -0.67 0.34 -0.32
31 AT4G03990 transposable element gene 0.66 0.3 -0.34
32 AT3G07690 6-phosphogluconate dehydrogenase family protein -0.66 0.32 -0.33
33 AT5G11210 glutamate receptor 2.5 ARABIDOPSIS THALIANA GLU,
glutamate receptor 2.5		 -0.66 0.32 -0.32
34 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain -0.66 0.32 -0.31
35 AT3G01330 DP-E2F-like protein 3 DP-E2F-like protein 3, E2FF,
E2F-LIKE 2		 0.66 0.32 -0.3
36 AT4G03020 transducin family protein / WD-40 repeat family protein -0.66 0.3 -0.31
37 AT1G31650 RHO guanyl-nucleotide exchange factor 14 ATROPGEF14, RHO guanyl-nucleotide
exchange factor 14		 0.66 0.32 -0.32
38 AT5G56590 O-Glycosyl hydrolases family 17 protein 0.65 0.32 -0.31
39 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.65 0.33 -0.32
40 AT5G62460 RING/FYVE/PHD zinc finger superfamily protein -0.65 0.32 -0.32
41 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana 0.65 0.3 -0.32
42 AT2G47970 Nuclear pore localisation protein NPL4 -0.65 0.32 -0.32
43 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 -0.65 0.31 -0.32
44 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 0.65 0.36 -0.3
45 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 0.65 0.31 -0.31
46 AT5G47060 Protein of unknown function (DUF581) -0.65 0.32 -0.31
47 AT1G77720 putative protein kinase 1 putative protein kinase 1 0.64 0.29 -0.3
48 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein -0.64 0.3 -0.31
49 AT5G50960 nucleotide binding protein 35 NUCLEOTIDE BINDING PROTEIN 35,
nucleotide binding protein 35		 -0.64 0.32 -0.3
50 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein -0.64 0.32 -0.33
51 AT5G49430 WD40/YVTN repeat-like-containing domain;Bromodomain 0.63 0.29 -0.3
52 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.32 -0.29
53 AT1G32870 NAC domain protein 13 Arabidopsis NAC domain containing
protein 13, NAC domain protein 13,
NAC domain protein 13		 -0.63 0.32 -0.31
54 AT4G02730 Transducin/WD40 repeat-like superfamily protein AtWDR5b, human WDR5 (WD40 repeat)
homolog b		 -0.63 0.3 -0.3
55 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.63 0.32 -0.3
56 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.63 0.28 -0.31
57 AT5G24500 unknown protein; Has 133 Blast hits to 129 proteins in 40
species: Archae - 2; Bacteria - 0; Metazoa - 60; Fungi - 5;
Plants - 29; Viruses - 0; Other Eukaryotes - 37 (source:
NCBI BLink).		 -0.63 0.3 -0.33
58 AT1G11160 Transducin/WD40 repeat-like superfamily protein 0.63 0.31 -0.31
59 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 -0.63 0.31 -0.33
60 AT3G51200 SAUR-like auxin-responsive protein family 0.63 0.31 -0.33
61 AT3G28480 Oxoglutarate/iron-dependent oxygenase -0.63 0.3 -0.32
62 AT1G05610 ADP-glucose pyrophosphorylase small subunit 2 ADP-glucose pyrophosphorylase
small subunit 2		 -0.63 0.29 -0.32
63 AT3G18250 Putative membrane lipoprotein -0.63 0.3 -0.3
64 AT3G02420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0121
(InterPro:IPR005344); Has 72 Blast hits to 71 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.62 0.33 -0.32
65 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.62 0.31 -0.31
66 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.62 0.32 -0.31
67 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 -0.62 0.32 -0.32
68 AT3G43510 transposable element gene -0.62 0.33 -0.3
69 AT5G06410 DNAJ heat shock N-terminal domain-containing protein -0.62 0.31 -0.29
70 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 0.62 0.34 -0.33
71 AT2G45100 Cyclin/Brf1-like TBP-binding protein 0.62 0.32 -0.29
72 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.62 0.32 -0.33
73 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 -0.62 0.32 -0.3