AGICode | AT2G26290 |
Description | root-specific kinase 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G26290 | root-specific kinase 1 | root-specific kinase 1 | 1 | 0.3 | -0.31 | ||
2 | AT2G34140 | Dof-type zinc finger DNA-binding family protein | 0.73 | 0.29 | -0.32 | |||
3 | AT1G73340 | Cytochrome P450 superfamily protein | 0.7 | 0.31 | -0.31 | |||
4 | AT5G03650 | starch branching enzyme 2.2 | starch branching enzyme 2.2 | -0.7 | 0.31 | -0.32 | ||
5 | AT3G20710 | F-box family protein | 0.7 | 0.31 | -0.35 | |||
6 | AT1G74030 | enolase 1 | enolase 1 | 0.67 | 0.33 | -0.31 | ||
7 | ATCG00120 | ATP synthase subunit alpha | ATP synthase subunit alpha | -0.66 | 0.32 | -0.31 | ||
8 | AT2G35270 | Predicted AT-hook DNA-binding family protein | GIANT KILLER | 0.66 | 0.32 | -0.3 | ||
9 | AT1G26820 | ribonuclease 3 | ribonuclease 3 | 0.64 | 0.32 | -0.35 | ||
10 | AT5G10580 | Protein of unknown function, DUF599 | 0.64 | 0.34 | -0.32 | |||
11 | ATCG00780 | ribosomal protein L14 | ribosomal protein L14 | -0.64 | 0.31 | -0.32 | ||
12 | AT1G40230 | transposable element gene | -0.64 | 0.32 | -0.32 | |||
13 | AT1G50840 | polymerase gamma 2 | polymerase gamma 2, polymerase I A | -0.63 | 0.33 | -0.33 | ||
14 | AT1G08990 | plant glycogenin-like starch initiation protein 5 | plant glycogenin-like starch initiation protein 5 |
0.63 | 0.33 | -0.34 | ||
15 | C0021 | ND:::GC-TOF/MS | 1-Aminocyclopropane-1-carboxylic acid, -, 1-Aminocyclopropane-1-carboxylate |
0.62 | 0.44 | -0.43 | ||
16 | AT1G73270 | serine carboxypeptidase-like 6 | serine carboxypeptidase-like 6 | 0.62 | 0.33 | -0.33 | ||
17 | AT2G15530 | RING/U-box superfamily protein | -0.62 | 0.3 | -0.33 | |||
18 | AT1G17060 | cytochrome p450 72c1 | CHIBI 2, cytochrome p450 72c1, SHRINK 1, SUPPRESSOR OF PHYB-4 7 |
0.62 | 0.31 | -0.29 | ||
19 | ATCG00340 | Photosystem I, PsaA/PsaB protein | PSAB | -0.62 | 0.32 | -0.33 | ||
20 | ATCG00550 | photosystem II reaction center protein J | photosystem II reaction center protein J |
-0.61 | 0.31 | -0.31 | ||
21 | ATCG00540 | photosynthetic electron transfer A | photosynthetic electron transfer A | -0.61 | 0.31 | -0.33 | ||
22 | AT3G19390 | Granulin repeat cysteine protease family protein | 0.61 | 0.32 | -0.32 | |||
23 | ATCG01040 | Cytochrome C assembly protein | YCF5 | -0.6 | 0.31 | -0.32 | ||
24 | AT1G05030 | Major facilitator superfamily protein | -0.6 | 0.31 | -0.34 | |||
25 | AT4G26950 | Protein of unknown function, DUF584 | -0.6 | 0.32 | -0.32 | |||
26 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | -0.59 | 0.33 | -0.32 | ||
27 | AT1G28610 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.59 | 0.3 | -0.33 | |||
28 | AT2G44450 | beta glucosidase 15 | beta glucosidase 15 | 0.59 | 0.31 | -0.32 | ||
29 | AT5G24660 | response to low sulfur 2 | RESPONSE TO LOW SULFUR 2 | -0.59 | 0.3 | -0.31 | ||
30 | AT4G18290 | potassium channel in Arabidopsis thaliana 2 | potassium channel in Arabidopsis thaliana 2 |
-0.59 | 0.32 | -0.31 | ||
31 | ATCG01100 | NADH dehydrogenase family protein | NDHA | -0.58 | 0.31 | -0.31 | ||
32 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | -0.58 | 0.3 | -0.3 | ||
33 | AT3G25900 | Homocysteine S-methyltransferase family protein | ATHMT-1, HMT-1 | 0.58 | 0.32 | -0.32 | ||
34 | AT5G35240 | transposable element gene | -0.58 | 0.32 | -0.32 | |||
35 | ATCG01070 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | NDHE | -0.58 | 0.31 | -0.34 | ||
36 | ATCG01050 | NADH-Ubiquinone/plastoquinone (complex I) protein | NDHD | -0.58 | 0.33 | -0.3 | ||
37 | AT4G13660 | pinoresinol reductase 2 | ATPRR2, pinoresinol reductase 2 | 0.58 | 0.34 | -0.31 | ||
38 | ATCG00520 | unfolded protein binding | YCF4 | -0.57 | 0.32 | -0.3 | ||
39 | AT3G44630 | Disease resistance protein (TIR-NBS-LRR class) family | -0.57 | 0.33 | -0.34 | |||
40 | AT3G26440 | Protein of unknown function (DUF707) | 0.57 | 0.31 | -0.34 | |||
41 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | 0.57 | 0.3 | -0.31 | ||
42 | AT1G27620 | HXXXD-type acyl-transferase family protein | 0.57 | 0.3 | -0.34 | |||
43 | ATCG00740 | RNA polymerase subunit alpha | RNA polymerase subunit alpha | -0.56 | 0.31 | -0.32 | ||
44 | AT1G48690 | Auxin-responsive GH3 family protein | 0.56 | 0.34 | -0.33 | |||
45 | AT2G15580 | RING/U-box superfamily protein | -0.56 | 0.32 | -0.3 | |||
46 | AT5G44870 | Disease resistance protein (TIR-NBS-LRR class) family | LAZARUS 5, tolerance to Tobacco ringspot virus 1 |
-0.56 | 0.33 | -0.29 | ||
47 | AT1G30130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920 (source: NCBI BLink). |
0.56 | 0.33 | -0.31 | |||
48 | AT3G62380 | CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.56 | 0.33 | -0.31 | |||
49 | ATCG01080 | NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 | NDHG | -0.56 | 0.33 | -0.31 | ||
50 | AT1G08060 | ATP-dependent helicase family protein | MAINTENANCE OF METHYLATION, MORPHEUS MOLECULE, MORPHEUS MOLECULE 1 |
-0.56 | 0.29 | -0.33 | ||
51 | AT5G66940 | Dof-type zinc finger DNA-binding family protein | -0.55 | 0.29 | -0.32 | |||
52 | ATCG00380 | chloroplast ribosomal protein S4 | chloroplast ribosomal protein S4 | -0.55 | 0.31 | -0.3 | ||
53 | AT2G27010 | cytochrome P450, family 705, subfamily A, polypeptide 9 | cytochrome P450, family 705, subfamily A, polypeptide 9 |
0.54 | 0.3 | -0.29 | ||
54 | ATCG00160 | ribosomal protein S2 | ribosomal protein S2 | -0.54 | 0.33 | -0.33 | ||
55 | AT5G65790 | myb domain protein 68 | MYB DOMAIN PROTEIN 68, myb domain protein 68 |
0.54 | 0.34 | -0.32 | ||
56 | AT5G02030 | POX (plant homeobox) family protein | BEL1-LIKE HOMEODOMAIN 9, BELLRINGER, HB-6, LARSON, PENNYWISE, REPLUMLESS, VAAMANA |
-0.54 | 0.31 | -0.33 | ||
57 | AT3G48640 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.3 | |||
58 | AT5G18560 | Integrase-type DNA-binding superfamily protein | PUCHI | 0.54 | 0.33 | -0.32 | ||
59 | AT3G27540 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.54 | 0.32 | -0.3 | |||
60 | AT5G43780 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS4 | 0.53 | 0.29 | -0.32 | ||
61 | AT1G17260 | autoinhibited H(+)-ATPase isoform 10 | autoinhibited H(+)-ATPase isoform 10 |
-0.53 | 0.32 | -0.3 | ||
62 | AT1G33070 | MADS-box family protein | -0.53 | 0.32 | -0.31 | |||
63 | AT1G31050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.53 | 0.31 | -0.3 | |||
64 | AT1G31050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.52 | 0.33 | -0.29 | |||
65 | ATCG00600 | PETG | PETG | -0.52 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
66 | C0177 | MST_2429.6 | - | - | - | -0.75 | 0.46 | -0.44 | ||
67 | C0184 | MST_3110.4 | - | - | - | -0.74 | 0.45 | -0.47 | ||
68 | C0129 | Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside | Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside | - | kaempferol glucoside biosynthesis (Arabidopsis) | -0.73 | 0.44 | -0.43 | ||
69 | C0121 | Isoheptylglucosinolate | - | - | - | 0.71 | 0.44 | -0.43 | ||
70 | C0072 | Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside | - | - | - | -0.7 | 0.45 | -0.47 | ||
71 | C0193 | Pantothenic acid | D,L-Pantothenic acid | Pantothenate | pantothenate biosynthesis | -0.69 | 0.43 | -0.44 | ||
72 | C0185 | MST_3139.9 | - | - | - | 0.68 | 0.42 | -0.43 | ||
73 | C0025 | 2-Hydroxy-3-butenylglucosinolate | (R),(S)-2-Hydroxy-3-butenylglucosinolate | 2-hydroxy-3-butenylglucosinolate | glucosinolate biosynthesis from dihomomethionine | 0.67 | 0.45 | -0.44 |