AT2G33800 : EMBRYO DEFECTIVE 3113
Query Information
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AGICode AT2G33800
Description Ribosomal protein S5 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 1 0.3 -0.31
2 AT3G13120 Ribosomal protein S10p/S20e family protein 0.97 0.3 -0.34
3 AT5G65220 Ribosomal L29 family protein 0.95 0.31 -0.31
4 AT5G47190 Ribosomal protein L19 family protein 0.95 0.32 -0.32
5 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.95 0.31 -0.33
6 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.95 0.29 -0.31
7 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.95 0.31 -0.32
8 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.95 0.31 -0.31
9 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.95 0.32 -0.34
10 AT2G43030 Ribosomal protein L3 family protein 0.95 0.32 -0.3
11 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.95 0.31 -0.3
12 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.95 0.31 -0.3
13 AT3G54210 Ribosomal protein L17 family protein 0.94 0.34 -0.32
14 AT4G34290 SWIB/MDM2 domain superfamily protein 0.94 0.35 -0.34
15 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.94 0.32 -0.33
16 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.94 0.31 -0.32
17 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.94 0.31 -0.3
18 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.94 0.3 -0.31
19 AT1G53520 Chalcone-flavanone isomerase family protein 0.94 0.33 -0.32
20 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.94 0.34 -0.28
21 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.93 0.32 -0.32
22 AT3G28460 methyltransferases 0.93 0.31 -0.3
23 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.93 0.33 -0.3
24 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.93 0.32 -0.31
25 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.93 0.33 -0.31
26 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.93 0.31 -0.31
27 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.93 0.31 -0.3
28 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.93 0.31 -0.31
29 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.93 0.31 -0.33
30 AT2G18710 SECY homolog 1 SECY homolog 1 0.93 0.31 -0.31
31 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.93 0.32 -0.34
32 AT1G14030 Rubisco methyltransferase family protein 0.93 0.33 -0.32
33 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.92 0.32 -0.31
34 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.92 0.32 -0.31
35 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.92 0.32 -0.3
36 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.92 0.31 -0.32
37 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.92 0.31 -0.32
38 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.92 0.33 -0.32
39 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.92 0.31 -0.3
40 AT4G26370 antitermination NusB domain-containing protein 0.92 0.31 -0.32
41 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.92 0.31 -0.32
42 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.92 0.32 -0.32
43 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.92 0.31 -0.31
44 AT5G52970 thylakoid lumen 15.0 kDa protein 0.92 0.29 -0.31
45 AT4G17740 Peptidase S41 family protein 0.91 0.34 -0.31
46 AT2G33450 Ribosomal L28 family 0.91 0.3 -0.32
47 AT3G12930 Lojap-related protein 0.91 0.33 -0.31
48 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.91 0.32 -0.31
49 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.91 0.31 -0.3
50 AT3G29185 Domain of unknown function (DUF3598) 0.91 0.3 -0.32
51 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.91 0.32 -0.31
52 AT5G55220 trigger factor type chaperone family protein 0.91 0.32 -0.31
53 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.91 0.3 -0.33
54 AT1G14270 CAAX amino terminal protease family protein 0.91 0.29 -0.31
55 AT3G20230 Ribosomal L18p/L5e family protein 0.91 0.3 -0.33
56 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.91 0.31 -0.28
57 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.91 0.32 -0.31
58 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.91 0.32 -0.3
59 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.32 -0.34
60 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.91 0.31 -0.31
61 AT5G46420 16S rRNA processing protein RimM family 0.91 0.3 -0.32
62 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.9 0.31 -0.32
63 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.9 0.32 -0.31
64 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.33 -0.32
65 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.9 0.32 -0.32
66 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.9 0.33 -0.31
67 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.9 0.32 -0.31
68 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.9 0.32 -0.32
69 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.9 0.29 -0.33
70 AT4G17560 Ribosomal protein L19 family protein 0.9 0.32 -0.3
71 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.9 0.32 -0.33
72 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.9 0.31 -0.32
73 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.9 0.32 -0.32
74 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.9 0.32 -0.3
75 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.9 0.31 -0.32
76 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.9 0.31 -0.3
77 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.9 0.31 -0.31
78 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.9 0.32 -0.31
79 AT1G60230 Radical SAM superfamily protein 0.9 0.34 -0.31
80 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.9 0.33 -0.32
81 AT2G24060 Translation initiation factor 3 protein 0.9 0.35 -0.32
82 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.9 0.31 -0.33
83 AT4G37510 Ribonuclease III family protein 0.9 0.3 -0.31
84 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.33 -0.31
85 AT5G63050 embryo defective 2759 embryo defective 2759 0.9 0.32 -0.3
86 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.9 0.34 -0.29
87 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.89 0.34 -0.32
88 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.89 0.32 -0.29
89 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.89 0.33 -0.34
90 AT4G01310 Ribosomal L5P family protein 0.89 0.32 -0.28
91 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 0.89 0.31 -0.31
92 AT1G78180 Mitochondrial substrate carrier family protein 0.89 0.3 -0.32
93 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.89 0.31 -0.3
94 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.89 0.32 -0.32
95 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.89 0.3 -0.29
96 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.89 0.32 -0.31
97 AT1G17200 Uncharacterised protein family (UPF0497) 0.89 0.31 -0.32
98 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.89 0.31 -0.3
99 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.3 -0.33
100 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.89 0.3 -0.32
101 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.89 0.32 -0.33
102 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.89 0.31 -0.32
103 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.34 -0.28
104 AT1G29070 Ribosomal protein L34 0.89 0.34 -0.3
105 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.89 0.31 -0.32
106 AT2G14880 SWIB/MDM2 domain superfamily protein 0.89 0.33 -0.3
107 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.89 0.33 -0.34
108 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.3 -0.31
109 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.89 0.32 -0.31
110 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.89 0.31 -0.31
111 AT1G63840 RING/U-box superfamily protein -0.85 0.34 -0.32
112 AT3G10500 NAC domain containing protein 53 NAC domain containing protein 53,
NAC domain containing protein 53		 -0.85 0.31 -0.3
113 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.83 0.31 -0.33
114 AT3G25290 Auxin-responsive family protein -0.83 0.32 -0.32
115 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.82 0.29 -0.33
116 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.82 0.32 -0.34
117 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.81 0.3 -0.32
118 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.81 0.32 -0.31
119 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.81 0.32 -0.31
120 AT5G06750 Protein phosphatase 2C family protein -0.81 0.34 -0.31
121 AT4G18360 Aldolase-type TIM barrel family protein -0.81 0.31 -0.33
122 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.81 0.34 -0.32
123 AT4G37370 cytochrome P450, family 81, subfamily D, polypeptide 8 cytochrome P450, family 81,
subfamily D, polypeptide 8		 -0.8 0.3 -0.33
124 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.8 0.31 -0.31
125 AT4G13180 NAD(P)-binding Rossmann-fold superfamily protein -0.8 0.31 -0.31
126 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.79 0.31 -0.31
127 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.78 0.29 -0.3
128 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.77 0.3 -0.33
129 AT5G24090 chitinase A chitinase A, chitinase A -0.77 0.31 -0.32
130 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.77 0.31 -0.32
131 AT5G25930 Protein kinase family protein with leucine-rich repeat
domain		 -0.77 0.32 -0.3
132 AT3G57380 Glycosyltransferase family 61 protein -0.77 0.31 -0.35
133 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 -0.76 0.32 -0.34
134 AT1G63460 glutathione peroxidase 8 ATGPX8, glutathione peroxidase 8 -0.76 0.3 -0.32
135 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.76 0.33 -0.31
136 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.76 0.32 -0.34
137 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.76 0.33 -0.33
138 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.75 0.31 -0.33
139 AT4G15610 Uncharacterised protein family (UPF0497) -0.75 0.3 -0.32
140 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.75 0.31 -0.33
141 AT5G18780 F-box/RNI-like superfamily protein -0.75 0.3 -0.3
142 AT2G15490 UDP-glycosyltransferase 73B4 UDP-glycosyltransferase 73B4 -0.75 0.29 -0.31
143 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.74 0.32 -0.32
144 AT1G77920 bZIP transcription factor family protein -0.73 0.32 -0.32
145 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 -0.73 0.32 -0.32
146 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 -0.73 0.31 -0.32
147 AT5G67340 ARM repeat superfamily protein -0.72 0.32 -0.3
148 AT5G52810 NAD(P)-binding Rossmann-fold superfamily protein -0.72 0.3 -0.3
149 AT5G62530 aldehyde dehydrogenase 12A1 aldehyde dehydrogenase 12A1,
ARABIDOPSIS THALIANA
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE,
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE		 -0.72 0.3 -0.32
150 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.32 -0.32