AGICode | AT2G19180 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G19180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.3 | -0.32 | |||
2 | AT5G52160 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.71 | 0.31 | -0.32 | |||
3 | AT3G44830 | Lecithin:cholesterol acyltransferase family protein | 0.7 | 0.32 | -0.32 | |||
4 | AT1G34220 | Regulator of Vps4 activity in the MVB pathway protein | 0.69 | 0.31 | -0.33 | |||
5 | AT5G15110 | Pectate lyase family protein | -0.68 | 0.32 | -0.31 | |||
6 | AT5G40190 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
0.68 | 0.32 | -0.32 | |||
7 | AT1G76660 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink). |
0.67 | 0.31 | -0.29 | |||
8 | AT3G12960 | unknown protein; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.33 | -0.31 | |||
9 | AT4G03640 | transposable element gene | -0.66 | 0.32 | -0.31 | |||
10 | AT3G20570 | early nodulin-like protein 9 | AtENODL9, early nodulin-like protein 9 |
0.66 | 0.3 | -0.33 | ||
11 | AT1G23910 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.66 | 0.31 | -0.31 | |||
12 | AT1G66150 | transmembrane kinase 1 | transmembrane kinase 1 | 0.66 | 0.33 | -0.34 | ||
13 | AT4G26260 | myo-inositol oxygenase 4 | myo-inositol oxygenase 4 | 0.66 | 0.31 | -0.32 | ||
14 | AT1G20150 | Subtilisin-like serine endopeptidase family protein | -0.66 | 0.34 | -0.33 | |||
15 | AT5G42560 | Abscisic acid-responsive (TB2/DP1, HVA22) family protein | 0.66 | 0.32 | -0.31 | |||
16 | AT1G71690 | Protein of unknown function (DUF579) | -0.65 | 0.32 | -0.32 | |||
17 | AT1G26300 | BSD domain-containing protein | 0.65 | 0.3 | -0.34 | |||
18 | AT3G10620 | nudix hydrolase homolog 26 | nudix hydrolase homolog 26, nudix hydrolase homolog 26 |
0.65 | 0.32 | -0.32 | ||
19 | AT4G34320 | Protein of unknown function (DUF677) | -0.65 | 0.33 | -0.32 | |||
20 | AT2G07560 | H(+)-ATPase 6 | H(+)-ATPase 6, H(+)-ATPase 6 | 0.64 | 0.32 | -0.31 | ||
21 | AT2G15570 | Thioredoxin superfamily protein | ATHM3, Arabidopsis thioredoxin M-type 3, GFP ARRESTED TRAFFICKING 1, THIOREDOXIN-M3 |
0.64 | 0.32 | -0.33 | ||
22 | AT1G04050 | homolog of SU(var)3-9 1 | SET DOMAIN PROTEIN 13, homolog of SU(var)3-9 1 |
-0.64 | 0.34 | -0.32 | ||
23 | AT1G33860 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.64 | 0.3 | -0.33 | |||
24 | AT3G46390 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.32 | -0.32 | |||
25 | AT2G36400 | growth-regulating factor 3 | growth-regulating factor 3, growth-regulating factor 3 |
0.63 | 0.32 | -0.31 | ||
26 | AT4G09830 | Uncharacterised conserved protein UCP009193 | 0.63 | 0.31 | -0.32 | |||
27 | AT2G40220 | Integrase-type DNA-binding superfamily protein | ABA INSENSITIVE 4, ATABI4, GLUCOSE INSENSITIVE 6, IMPAIRED SUCROSE INDUCTION 3, SALOBRENO 5, SUGAR-INSENSITIVE 5, SUCROSE UNCOUPLED 6 |
-0.63 | 0.31 | -0.31 | ||
28 | AT2G32710 | Cyclin-dependent kinase inhibitor family protein | CYCLIN-DEPENDENT KINASE INHIBITOR 2, INTERACTORS OF CDC2 KINASE 7, KRP4, KIP-RELATED PROTEIN 4 |
0.63 | 0.31 | -0.3 | ||
29 | AT3G52760 | Integral membrane Yip1 family protein | 0.62 | 0.29 | -0.28 | |||
30 | AT2G06120 | transposable element gene | -0.61 | 0.32 | -0.29 | |||
31 | AT5G02040 | prenylated RAB acceptor 1.A1 | prenylated RAB acceptor 1.A1 | 0.61 | 0.34 | -0.31 | ||
32 | AT2G02660 | F-box associated ubiquitination effector family protein | 0.61 | 0.32 | -0.33 | |||
33 | AT2G06150 | transposable element gene | -0.6 | 0.32 | -0.33 | |||
34 | AT5G60090 | Protein kinase superfamily protein | -0.6 | 0.32 | -0.31 | |||
35 | AT2G42870 | phy rapidly regulated 1 | HELIX-LOOP-HELIX 1, PHY RAPIDLY REGULATED 1 |
0.6 | 0.32 | -0.31 | ||
36 | AT5G01150 | Protein of unknown function (DUF674) | 0.6 | 0.29 | -0.31 | |||
37 | AT2G27120 | DNA polymerase epsilon catalytic subunit | POL2B, TILTED 2 | -0.6 | 0.31 | -0.33 | ||
38 | AT3G60570 | expansin B5 | expansin B5, ATHEXP BETA 1.3, expansin B5 |
-0.59 | 0.3 | -0.33 | ||
39 | AT2G26280 | CTC-interacting domain 7 | CTC-interacting domain 7 | -0.59 | 0.31 | -0.3 | ||
40 | AT2G15110 | Protein of unknown function, DUF601 | 0.59 | 0.33 | -0.31 | |||
41 | AT3G30190 | transposable element gene | -0.59 | 0.32 | -0.31 | |||
42 | AT2G14550 | pseudogene, putative pre-mRNA splicing factor, non-consensus splice donor TA at exon 5; blastp match of 67% identity and 1.1e-68 P-value to GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing factor 3b, subunit 4, 49kD {Xenopus laevis} |
0.59 | 0.3 | -0.31 | |||
43 | AT2G20880 | Integrase-type DNA-binding superfamily protein | AtERF53, ERF domain 53 | -0.59 | 0.3 | -0.32 | ||
44 | AT5G10620 | methyltransferases | 0.59 | 0.33 | -0.3 | |||
45 | AT2G13500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits to 126 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.33 | -0.34 | |||
46 | AT4G31750 | HOPW1-1-interacting 2 | HOPW1-1-interacting 2 | -0.59 | 0.31 | -0.3 | ||
47 | AT4G22020 | pseudogene, hypothetical protein, similar to uncharacterized glycine-rich protein (GI:7269047) {Arabidopsis thaliana} |
-0.59 | 0.32 | -0.31 | |||
48 | AT2G04060 | glycosyl hydrolase family 35 protein | -0.58 | 0.31 | -0.31 | |||
49 | AT3G30740 | 40S ribosomal protein S25 (RPS25C), pseudogene, similar to GB:P46301 GI:1173234 40S RIBOSOMAL PROTEIN S25 from (Lycopersicon esculentum); blastp match of 75% identity and 7.2e-09 P-value to SP|P46301|RS25_LYCES 40S ribosomal protein S25. (Tomato) {Lycopersicon esculentum} |
0.58 | 0.32 | -0.31 | |||
50 | AT3G43330 | transposable element gene | 0.58 | 0.31 | -0.31 | |||
51 | AT5G07480 | KAR-UP oxidoreductase 1 | KAR-UP oxidoreductase 1 | -0.58 | 0.31 | -0.3 | ||
52 | AT5G55560 | Protein kinase superfamily protein | -0.58 | 0.28 | -0.31 | |||
53 | AT4G32700 | helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding |
TEBICHI | -0.58 | 0.31 | -0.34 | ||
54 | AT3G53030 | ser/arg-rich protein kinase 4 | ser/arg-rich protein kinase 4 | 0.58 | 0.35 | -0.31 | ||
55 | AT1G49880 | Erv1/Alr family protein | AtErv1, EMBRYO DEFECTIVE 3106, Erv1 |
0.58 | 0.31 | -0.31 | ||
56 | AT4G11440 | Mitochondrial substrate carrier family protein | -0.57 | 0.33 | -0.33 | |||
57 | AT3G08550 | elongation defective 1 protein / ELD1 protein | ABA INSENSITIVE 8, ELONGATION DEFECTIVE 1, KOBITO |
0.57 | 0.32 | -0.32 | ||
58 | AT3G30800 | transposable element gene | -0.57 | 0.34 | -0.33 | |||
59 | AT4G08340 | transposable element gene | 0.57 | 0.32 | -0.31 | |||
60 | AT1G03390 | HXXXD-type acyl-transferase family protein | 0.57 | 0.3 | -0.33 | |||
61 | AT5G45970 | RAC-like 2 | Arabidopsis RAC-like 2, ARABIDOPSIS THALIANA RAC 2, RHO-RELATED PROTEIN FROM PLANTS 7, RAC-like 2, ROP7 |
0.57 | 0.31 | -0.32 | ||
62 | AT3G09130 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.33 | -0.3 | |||
63 | AT1G14530 | Protein of unknown function (DUF1084) | TOM THREE HOMOLOG 1 | 0.57 | 0.32 | -0.32 | ||
64 | AT5G55950 | Nucleotide/sugar transporter family protein | -0.57 | 0.31 | -0.3 | |||
65 | AT4G19620 | unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.32 | |||
66 | AT1G52240 | RHO guanyl-nucleotide exchange factor 11 | ATROPGEF11, phytochrome interacting RopGEF 1, RHO guanyl-nucleotide exchange factor 11 |
0.57 | 0.32 | -0.3 | ||
67 | AT3G22870 | F-box and associated interaction domains-containing protein | 0.57 | 0.31 | -0.33 | |||
68 | AT1G15700 | ATPase, F1 complex, gamma subunit protein | ATPC2 | 0.57 | 0.32 | -0.34 | ||
69 | AT3G59460 | BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.29 | -0.34 | |||
70 | AT5G56230 | prenylated RAB acceptor 1.G2 | prenylated RAB acceptor 1.G2 | 0.56 | 0.3 | -0.33 | ||
71 | AT1G04100 | indoleacetic acid-induced protein 10 | indoleacetic acid-induced protein 10 |
-0.56 | 0.3 | -0.32 | ||
72 | AT5G25450 | Cytochrome bd ubiquinol oxidase, 14kDa subunit | -0.56 | 0.34 | -0.34 | |||
73 | AT3G17690 | cyclic nucleotide gated channel 19 | CYCLIC NUCLEOTIDE-GATED CHANNEL 19, cyclic nucleotide gated channel 19 |
0.56 | 0.33 | -0.31 | ||
74 | AT5G62400 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.31 | |||
75 | AT5G58400 | Peroxidase superfamily protein | 0.56 | 0.32 | -0.31 | |||
76 | AT3G56740 | Ubiquitin-associated (UBA) protein | 0.56 | 0.3 | -0.31 | |||
77 | AT1G05770 | Mannose-binding lectin superfamily protein | 0.56 | 0.3 | -0.28 | |||
78 | AT2G14930 | transposable element gene | -0.56 | 0.32 | -0.32 | |||
79 | AT2G18820 | transposable element gene | -0.55 | 0.31 | -0.32 | |||
80 | AT2G27250 | CLAVATA3 | AtCLV3, CLAVATA3 | 0.55 | 0.31 | -0.3 | ||
81 | AT5G27430 | Signal peptidase subunit | 0.55 | 0.31 | -0.31 | |||
82 | AT4G39590 | Galactose oxidase/kelch repeat superfamily protein | 0.55 | 0.35 | -0.33 | |||
83 | AT5G27650 | Tudor/PWWP/MBT superfamily protein | 0.55 | 0.34 | -0.32 | |||
84 | AT1G19030 | transposable element gene | -0.55 | 0.32 | -0.3 | |||
85 | AT3G20850 | proline-rich family protein | 0.55 | 0.31 | -0.32 | |||
86 | AT1G03960 | Calcium-binding EF hand family protein | -0.55 | 0.32 | -0.31 | |||
87 | AT2G24255 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to 121 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.31 | |||
88 | AT5G50910 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.3 | -0.3 | |||
89 | AT5G38380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.55 | 0.33 | -0.3 | |||
90 | AT2G19230 | Leucine-rich repeat transmembrane protein kinase protein | -0.55 | 0.33 | -0.34 | |||
91 | AT3G62980 | F-box/RNI-like superfamily protein | AtTIR1, TRANSPORT INHIBITOR RESPONSE 1 |
0.55 | 0.31 | -0.3 | ||
92 | AT4G10350 | NAC domain containing protein 70 | NAC domain containing protein 70, BEARSKIN 2, NAC domain containing protein 70 |
-0.55 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
93 | C0228 | Ribose-5-phosphate | D-Ribose-5-phosphate | D-Ribose-5-phosphate | PRPP biosynthesis I, Calvin-Benson-Bassham cycle, trans-zeatin biosynthesis, pentose phosphate pathway (non-oxidative branch), pyridine nucleotide cycling (plants), Rubisco shunt, ribose degradation, pyridoxal 5'-phosphate biosynthesis II |
0.8 | 0.46 | -0.47 |