AT2G30520 : ROOT PHOTOTROPISM 2
Query Information
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AGICode AT2G30520
Description Phototropic-responsive NPH3 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G30520 Phototropic-responsive NPH3 family protein ROOT PHOTOTROPISM 2 1 0.3 -0.32
2 AT2G30520 Phototropic-responsive NPH3 family protein ROOT PHOTOTROPISM 2 0.87 0.31 -0.34
3 AT1G29530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits
to 78 proteins in 24 species: Archae - 2; Bacteria - 4;
Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 0.81 0.31 -0.31
4 AT2G42900 Plant basic secretory protein (BSP) family protein 0.79 0.34 -0.28
5 AT3G23880 F-box and associated interaction domains-containing protein 0.79 0.32 -0.31
6 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.78 0.33 -0.33
7 AT1G67480 Galactose oxidase/kelch repeat superfamily protein 0.78 0.33 -0.34
8 AT5G26770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.78 0.32 -0.31
9 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.78 0.3 -0.32
10 AT1G70985 hydroxyproline-rich glycoprotein family protein 0.78 0.32 -0.31
11 AT5G23850 Arabidopsis thaliana protein of unknown function (DUF821) -0.77 0.3 -0.3
12 AT1G12100 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.77 0.32 -0.32
13 AT3G07270 GTP cyclohydrolase I 0.75 0.3 -0.3
14 AT2G33330 plasmodesmata-located protein 3 plasmodesmata-located protein 3 0.75 0.31 -0.32
15 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.75 0.31 -0.32
16 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.75 0.33 -0.32
17 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.75 0.33 -0.32
18 AT5G67340 ARM repeat superfamily protein -0.74 0.33 -0.31
19 AT4G23400 plasma membrane intrinsic protein 1;5 plasma membrane intrinsic protein
1;5, PIP1D		 0.74 0.34 -0.32
20 AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein 0.74 0.32 -0.31
21 AT2G43100 isopropylmalate isomerase 2 ATLEUD1, isopropylmalate isomerase
2		 0.74 0.3 -0.32
22 AT3G14770 Nodulin MtN3 family protein AtSWEET2, SWEET2 0.74 0.33 -0.31
23 AT5G08270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23200.1); Has 89 Blast hits
to 86 proteins in 45 species: Archae - 0; Bacteria - 0;
Metazoa - 27; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.74 0.3 -0.32
24 AT4G21870 HSP20-like chaperones superfamily protein 0.74 0.29 -0.33
25 AT2G21620 Adenine nucleotide alpha hydrolases-like superfamily
protein		 RD2 -0.73 0.31 -0.32
26 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.73 0.32 -0.33
27 AT3G02180 SPIRAL1-like3 SPIRAL1-like3 0.73 0.32 -0.3
28 AT5G23670 long chain base2 long chain base2 0.73 0.31 -0.33
29 AT1G01430 TRICHOME BIREFRINGENCE-LIKE 25 TRICHOME BIREFRINGENCE-LIKE 25 0.73 0.32 -0.31
30 AT5G64030 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.31 -0.33
31 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 0.73 0.31 -0.31
32 AT4G36010 Pathogenesis-related thaumatin superfamily protein -0.72 0.34 -0.32
33 AT5G13200 GRAM domain family protein -0.72 0.31 -0.3
34 AT2G21220 SAUR-like auxin-responsive protein family 0.72 0.34 -0.31
35 AT3G18750 with no lysine (K) kinase 6 ARABIDOPSIS THALIANA WITH NO K 6,
with no lysine (K) kinase 6, ZIK5		 0.72 0.33 -0.32
36 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.72 0.32 -0.3
37 AT5G17850 Sodium/calcium exchanger family protein -0.72 0.3 -0.32
38 AT4G18700 CBL-interacting protein kinase 12 WPL4-LIKE 4, CBL-interacting
protein kinase 12, SNF1-RELATED
PROTEIN KINASE 3.9, WPL4-LIKE 4		 -0.71 0.29 -0.31
39 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.3 -0.32
40 AT2G41600 Mitochondrial glycoprotein family protein 0.71 0.32 -0.3
41 AT2G31790 UDP-Glycosyltransferase superfamily protein 0.71 0.31 -0.29
42 AT1G76890 Duplicated homeodomain-like superfamily protein AT-GT2, GT2 0.71 0.31 -0.32
43 AT5G11110 sucrose phosphate synthase 2F sucrose phosphate synthase 2F,
KAONASHI 2, SUCROSE PHOSPHATE
SYNTHASE 1, sucrose phosphate
synthase 2F, sucrose-phosphate
synthase A2		 -0.71 0.31 -0.32
44 AT1G23480 cellulose synthase-like A3 cellulose synthase-like A3,
ATCSLA3, CSLA03, cellulose
synthase-like A3, CELLULOSE
SYNTHASE-LIKE A3		 0.71 0.3 -0.31
45 AT5G66770 GRAS family transcription factor 0.71 0.31 -0.3
46 AT1G34010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits
to 74 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.31
47 AT2G38120 Transmembrane amino acid transporter family protein AUXIN RESISTANT 1, MODIFIER OF
ARF7/NPH4 PHENOTYPES 1, PIR1, WAVY
ROOTS 5		 0.7 0.32 -0.3
48 AT1G80060 Ubiquitin-like superfamily protein 0.7 0.33 -0.3
49 AT1G62710 beta vacuolar processing enzyme beta vacuolar processing enzyme,
BETAVPE		 -0.7 0.33 -0.32
50 AT3G18830 polyol/monosaccharide transporter 5 POLYOL TRANSPORTER 5, ARABIDOPSIS
THALIANA POLYOL/MONOSACCHARIDE
TRANSPORTER 5,
polyol/monosaccharide transporter
5		 -0.7 0.31 -0.29
51 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.7 0.3 -0.32
52 AT2G01290 ribose-5-phosphate isomerase 2 ribose-5-phosphate isomerase 2 0.69 0.31 -0.33
53 AT5G43070 WPP domain protein 1 WPP domain protein 1 0.69 0.33 -0.32
54 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.69 0.33 -0.3
55 AT4G34960 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.69 0.31 -0.33
56 AT5G55260 protein phosphatase X 2 PROTEIN PHOSPHATASE X -2, protein
phosphatase X 2		 0.69 0.31 -0.34
57 AT5G66240 Transducin/WD40 repeat-like superfamily protein 0.69 0.31 -0.33
58 AT3G26630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.31 -0.31
59 AT1G65690 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.31 -0.3
60 AT5G07990 Cytochrome P450 superfamily protein CYTOCHROME P450 75B1, D501,
TRANSPARENT TESTA 7		 -0.69 0.3 -0.31
61 AT5G58700 phosphatidylinositol-speciwc phospholipase C4 ATPLC4,
phosphatidylinositol-speciwc
phospholipase C4		 -0.68 0.33 -0.31
62 AT1G27200 Domain of unknown function (DUF23) -0.68 0.32 -0.34
63 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.68 0.31 -0.32
64 AT4G18460 D-Tyr-tRNA(Tyr) deacylase family protein 0.68 0.3 -0.32
65 AT3G30250 transposable element gene 0.68 0.33 -0.32
66 AT5G12020 17.6 kDa class II heat shock protein 17.6 kDa class II heat shock
protein		 -0.67 0.32 -0.33
67 AT2G15320 Leucine-rich repeat (LRR) family protein -0.67 0.32 -0.34
68 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.67 0.32 -0.32
69 AT1G75370 Sec14p-like phosphatidylinositol transfer family protein -0.67 0.32 -0.31
70 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 -0.67 0.31 -0.32
71 AT2G26560 phospholipase A 2A PHOSPHOLIPASE A 2A, phospholipase
A 2A, PATATIN-LIKE PROTEIN 2,
PHOSPHOLIPASE A 2A		 -0.67 0.32 -0.34
72 AT4G21380 receptor kinase 3 receptor kinase 3, receptor kinase
3		 -0.67 0.31 -0.31
73 AT1G18890 calcium-dependent protein kinase 1 calcium-dependent protein kinase
1, AtCPK10, calcium-dependent
protein kinase 1, CPK10		 -0.66 0.33 -0.32
74 AT5G18670 beta-amylase 3 BETA-AMYLASE 9, beta-amylase 3 0.66 0.3 -0.32
75 AT4G14100 transferases, transferring glycosyl groups 0.66 0.33 -0.32
76 AT5G05610 alfin-like 1 alfin-like 1 0.66 0.32 -0.3
77 AT2G46240 BCL-2-associated athanogene 6 ARABIDOPSIS THALIANA
BCL-2-ASSOCIATED ATHANOGENE 6,
BCL-2-associated athanogene 6		 -0.66 0.32 -0.32
78 AT2G22260 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.66 0.31 -0.31
79 AT4G40060 homeobox protein 16 ATHB-16, homeobox protein 16,
homeobox protein 16		 0.66 0.33 -0.31
80 AT2G23120 Late embryogenesis abundant protein, group 6 -0.66 0.32 -0.32
81 AT5G20730 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 7, BIPOSTO,
indole-3-acetic acid inducible 21,
indole-3-acetic acid inducible 23,
indole-3-acetic acid inducible 25,
MASSUGU 1, NON-PHOTOTROPHIC
HYPOCOTYL, TRANSPORT INHIBITOR
RESPONSE 5		 -0.65 0.31 -0.32
82 AT1G20450 Dehydrin family protein EARLY RESPONSIVE TO DEHYDRATION
10, LOW TEMPERATURE INDUCED 29,
LOW TEMPERATURE INDUCED 45		 -0.65 0.31 -0.31
83 AT5G04220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3,
synaptotagmin 3, SYTC		 -0.64 0.34 -0.32
84 AT1G57630 Toll-Interleukin-Resistance (TIR) domain family protein -0.64 0.31 -0.32
85 AT1G33970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.31 -0.32
86 AT1G80110 phloem protein 2-B11 phloem protein 2-B11, phloem
protein 2-B11		 -0.64 0.31 -0.33
87 AT5G06760 Late Embryogenesis Abundant 4-5 Late Embryogenesis Abundant 4-5,
Late Embryogenesis Abundant 4-5		 -0.64 0.32 -0.34
88 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.32
89 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 -0.64 0.31 -0.3
90 AT1G68795 CLAVATA3/ESR-RELATED 12 CLAVATA3/ESR-RELATED 12 -0.64 0.31 -0.32
91 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.33
92 AT1G11210 Protein of unknown function (DUF761) -0.63 0.31 -0.31
93 AT5G11210 glutamate receptor 2.5 ARABIDOPSIS THALIANA GLU,
glutamate receptor 2.5		 -0.63 0.32 -0.32
94 AT3G18440 aluminum-activated malate transporter 9 aluminum-activated malate
transporter 9, aluminum-activated
malate transporter 9		 -0.63 0.34 -0.3
95 AT3G15350 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.63 0.32 -0.31
96 AT3G46230 heat shock protein 17.4 ARABIDOPSIS THALIANA HEAT SHOCK
PROTEIN 17.4, heat shock protein
17.4		 -0.63 0.31 -0.3
97 AT1G50630 Protein of unknown function (DUF3537) -0.63 0.32 -0.32
98 AT4G01550 NAC domain containing protein 69 NAC domain containing protein 69,
NAC domain containing protein 69,
NAC with Transmembrane Motif 2		 -0.63 0.32 -0.29
99 AT3G12580 heat shock protein 70 ARABIDOPSIS HEAT SHOCK PROTEIN 70,
heat shock protein 70		 -0.63 0.32 -0.33
100 AT1G65890 acyl activating enzyme 12 acyl activating enzyme 12 -0.63 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.8 0.39 -0.44 C0017
102 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.68 0.46 -0.43