AT2G42030 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G42030
Description RING/U-box superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42030 RING/U-box superfamily protein 1 0.32 -0.29
2 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).
0.66 0.3 -0.31
3 AT1G60160 Potassium transporter family protein 0.65 0.31 -0.33
4 AT4G26740 seed gene 1 ARABIDOPSIS THALIANA PEROXYGENASE
1, seed gene 1, CALEOSIN1
0.62 0.31 -0.31
5 AT3G05120 alpha/beta-Hydrolases superfamily protein GA INSENSITIVE DWARF1A, GA
INSENSITIVE DWARF1A
0.62 0.31 -0.3
6 AT3G22240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits
to 177 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.62 0.31 -0.32
7 AT3G51810 Stress induced protein AT3, ARABIDOPSIS THALIANA LATE
EMBRYOGENESIS ABUNDANT 1, LATE
EMBRYOGENESIS ABUNDANT 1, GUANINE
NUCLEOTIDE EXCHANGE FACTOR FOR ADP
RIBOSYLATION FACTORS 1
0.61 0.31 -0.31
8 AT1G02420 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.31 -0.3
9 AT2G41740 villin 2 ATVLN2, villin 2 -0.59 0.32 -0.33
10 AT2G06200 growth-regulating factor 6 growth-regulating factor 6,
growth-regulating factor 6
-0.59 0.3 -0.32
11 AT1G13400 C2H2 and C2HC zinc fingers superfamily protein JAGGED-LIKE, NUBBIN 0.59 0.31 -0.33
12 ATCG01010 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein NDHF 0.58 0.3 -0.32
13 AT1G68580 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein
0.57 0.32 -0.33
14 AT1G20690 SWI-SNF-related chromatin binding protein -0.57 0.31 -0.31
15 AT5G18390 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.33 -0.32
16 AT5G38730 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.3 -0.32
17 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 0.54 0.33 -0.3
18 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A 0.53 0.31 -0.32
19 AT5G43360 phosphate transporter 1;3 ATPT4, phosphate transporter 1;3,
PHOSPHATE TRANSPORTER 3
-0.53 0.32 -0.31
20 AT4G10120 Sucrose-phosphate synthase family protein ATSPS4F -0.53 0.3 -0.31
21 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2
-0.53 0.33 -0.31
22 AT5G48530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G07440.1); Has 32 Blast hits to 32
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.52 0.31 -0.32
23 AT3G24770 CLAVATA3/ESR-RELATED 41 CLAVATA3/ESR-RELATED 41 0.52 0.31 -0.31
24 AT3G42880 Leucine-rich repeat protein kinase family protein 0.52 0.32 -0.31
25 AT4G24170 ATP binding microtubule motor family protein -0.52 0.31 -0.32
26 AT1G66460 Protein kinase superfamily protein -0.52 0.33 -0.32
27 AT5G67440 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 2, NAKED PINS
IN YUC MUTANTS 3
0.51 0.32 -0.31
28 AT4G03490 Ankyrin repeat family protein -0.51 0.33 -0.33
29 AT1G11630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.51 0.32 -0.31
30 AT3G28230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene
silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Something about silencing protein 10
(Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis
thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp)
family protein (TAIR:AT2G43650.1); Has 374 Blast hits to
360 proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other
Eukaryotes - 92 (source: NCBI BLink).
0.51 0.33 -0.33
31 AT3G01900 cytochrome P450, family 94, subfamily B, polypeptide 2 cytochrome P450, family 94,
subfamily B, polypeptide 2
-0.5 0.3 -0.32
32 AT1G73330 drought-repressed 4 drought-repressed 4,
drought-repressed 4
-0.5 0.3 -0.3
33 AT1G28340 receptor like protein 4 receptor like protein 4, receptor
like protein 4
-0.5 0.31 -0.33
34 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.5 0.31 -0.31
35 AT4G38760 Protein of unknown function (DUF3414) -0.49 0.32 -0.32
36 AT5G15420 unknown protein; Has 17 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).
-0.49 0.3 -0.3
37 AT1G36000 LOB domain-containing protein 5 LOB domain-containing protein 5 -0.48 0.32 -0.32
38 AT5G28930 transposable element gene 0.48 0.3 -0.31
39 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).
0.48 0.32 -0.34
40 AT4G27660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits
to 109 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).
-0.48 0.33 -0.32
41 AT1G43780 serine carboxypeptidase-like 44 serine carboxypeptidase-like 44 -0.48 0.32 -0.32
42 AT5G59830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13660.2); Has 174 Blast hits
to 139 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
0.48 0.3 -0.3
43 AT2G38840 Guanylate-binding family protein -0.48 0.31 -0.31
44 AT3G45950 Pre-mRNA splicing Prp18-interacting factor -0.48 0.29 -0.31
45 AT5G28490 Protein of unknown function (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS
1, ORGAN BOUNDARY 2
-0.48 0.31 -0.31
46 AT4G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.48 0.31 -0.3
47 AT2G01690 ARM repeat superfamily protein -0.48 0.3 -0.31
48 AT4G17590 CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic
nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis
thaliana protein match is:
S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein (TAIR:AT4G26600.1); Has 459 Blast hits
to 368 proteins in 186 species: Archae - 2; Bacteria - 0;
Metazoa - 137; Fungi - 144; Plants - 100; Viruses - 0;
Other Eukaryotes - 76 (source: NCBI BLink).
0.47 0.3 -0.33
49 AT1G49530 geranylgeranyl pyrophosphate synthase 6 geranylgeranyl pyrophosphate
synthase 6
-0.46 0.29 -0.31
50 AT4G03500 Ankyrin repeat family protein -0.45 0.3 -0.33
51 AT1G77140 vacuolar protein sorting 45 ATVPS45, vacuolar protein sorting
45
-0.44 0.32 -0.32
52 AT1G22910 RNA-binding (RRM/RBD/RNP motifs) family protein -0.44 0.3 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0180 MST_2539.9 - - - 0.72 0.44 -0.45
54 C0116 Hydroxylamine - Hydroxylamine - -0.58 0.46 -0.47 C0116
55 C0179 MST_2494.8 - - - 0.49 0.3 -0.31