AT2G30695 : -
Query Information
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AGICode AT2G30695
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 1 0.31 -0.32
2 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.94 0.31 -0.33
3 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.92 0.33 -0.31
4 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.92 0.32 -0.31
5 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.92 0.33 -0.29
6 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.92 0.32 -0.31
7 AT1G76450 Photosystem II reaction center PsbP family protein 0.91 0.32 -0.32
8 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.91 0.31 -0.33
9 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.91 0.3 -0.29
10 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.91 0.31 -0.32
11 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.91 0.36 -0.32
12 AT1G36390 Co-chaperone GrpE family protein 0.91 0.33 -0.31
13 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.91 0.31 -0.33
14 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.91 0.34 -0.31
15 AT3G20230 Ribosomal L18p/L5e family protein 0.91 0.32 -0.32
16 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.91 0.31 -0.32
17 AT2G18710 SECY homolog 1 SECY homolog 1 0.91 0.3 -0.31
18 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.91 0.32 -0.29
19 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.34
20 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.9 0.33 -0.3
21 AT2G45270 glycoprotease 1 glycoprotease 1 0.9 0.29 -0.29
22 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.9 0.31 -0.31
23 AT5G65220 Ribosomal L29 family protein 0.9 0.31 -0.33
24 AT3G12930 Lojap-related protein 0.9 0.33 -0.33
25 AT3G25660 Amidase family protein 0.9 0.3 -0.31
26 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.9 0.31 -0.31
27 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.9 0.33 -0.31
28 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.9 0.33 -0.32
29 AT3G29185 Domain of unknown function (DUF3598) 0.9 0.3 -0.3
30 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.32 -0.3
31 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.9 0.32 -0.31
32 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.9 0.32 -0.32
33 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.3 -0.3
34 AT2G24060 Translation initiation factor 3 protein 0.9 0.33 -0.32
35 AT4G37510 Ribonuclease III family protein 0.9 0.32 -0.31
36 AT1G14270 CAAX amino terminal protease family protein 0.9 0.33 -0.32
37 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.3 -0.31
38 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.89 0.31 -0.32
39 AT4G17740 Peptidase S41 family protein 0.89 0.32 -0.32
40 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.89 0.31 -0.33
41 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.89 0.33 -0.32
42 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.3 -0.33
43 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.89 0.31 -0.3
44 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.32 -0.29
45 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.89 0.31 -0.3
46 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.89 0.32 -0.32
47 AT4G26370 antitermination NusB domain-containing protein 0.89 0.32 -0.31
48 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein		 0.89 0.31 -0.33
49 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.31 -0.31
50 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.3 -0.31
51 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.89 0.32 -0.32
52 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.89 0.31 -0.33
53 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.89 0.31 -0.31
54 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.31 -0.3
55 AT1G49380 cytochrome c biogenesis protein family 0.89 0.32 -0.27
56 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.89 0.32 -0.3
57 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.3 -0.35
58 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.89 0.31 -0.34
59 AT3G51140 Protein of unknown function (DUF3353) 0.89 0.31 -0.31
60 AT5G10910 mraW methylase family protein 0.88 0.32 -0.3
61 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.88 0.3 -0.32
62 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.88 0.31 -0.31
63 AT5G48220 Aldolase-type TIM barrel family protein 0.88 0.33 -0.32
64 AT2G33450 Ribosomal L28 family 0.88 0.31 -0.29
65 AT3G12080 GTP-binding family protein embryo defective 2738 0.88 0.29 -0.29
66 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.88 0.31 -0.3
67 AT5G47190 Ribosomal protein L19 family protein 0.88 0.32 -0.3
68 AT3G19810 Protein of unknown function (DUF177) 0.88 0.3 -0.31
69 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.88 0.32 -0.33
70 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.32 -0.32
71 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.88 0.31 -0.3
72 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.88 0.3 -0.32
73 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.88 0.32 -0.32
74 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.88 0.34 -0.29
75 AT5G55220 trigger factor type chaperone family protein 0.88 0.32 -0.32
76 AT2G02500 Nucleotide-diphospho-sugar transferases superfamily protein ATMEPCT, ISPD,
2-C-METHYL-D-ERYTHRITOL
4-PHOSPHATE CYTIDYLTRANSFERASE		 0.88 0.32 -0.32
77 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.88 0.34 -0.32
78 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.32 -0.32
79 AT1G56050 GTP-binding protein-related 0.87 0.31 -0.31
80 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.31 -0.31
81 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.87 0.32 -0.32
82 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.87 0.33 -0.3
83 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.3 -0.3
84 AT1G76405 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.87 0.34 -0.3
85 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.31 -0.34
86 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.3 -0.3
87 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.87 0.31 -0.32
88 AT1G78180 Mitochondrial substrate carrier family protein 0.87 0.32 -0.29
89 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.87 0.31 -0.31
90 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.87 0.31 -0.33
91 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.87 0.3 -0.31
92 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.87 0.3 -0.3
93 AT5G05740 ethylene-dependent gravitropism-deficient and
yellow-green-like 2		 ATEGY2, ethylene-dependent
gravitropism-deficient and
yellow-green-like 2		 0.87 0.32 -0.31
94 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.87 0.3 -0.33
95 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.87 0.31 -0.31
96 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.87 0.32 -0.31
97 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.87 0.31 -0.32
98 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.87 0.31 -0.32
99 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.3 -0.33
100 AT3G25290 Auxin-responsive family protein -0.81 0.33 -0.33
101 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.8 0.29 -0.31
102 AT3G17820 glutamine synthetase 1.3 ARABIDOPSIS THALIANA GLUTAMINE
SYNTHASE CLONE KB6, glutamine
synthetase 1.3, GLUTAMINE
SYNTHETASE 1;3		 -0.8 0.33 -0.31
103 AT5G06750 Protein phosphatase 2C family protein -0.78 0.33 -0.3
104 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.74 0.33 -0.31
105 AT5G09980 elicitor peptide 4 precursor elicitor peptide 4 precursor -0.74 0.31 -0.29
106 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.74 0.36 -0.32
107 AT3G57380 Glycosyltransferase family 61 protein -0.74 0.31 -0.31
108 AT4G29690 Alkaline-phosphatase-like family protein -0.72 0.29 -0.33
109 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.7 0.31 -0.3
110 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.69 0.34 -0.29
111 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.69 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.76 0.4 -0.44 C0051