AT2G41990 : -
Query Information
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AGICode AT2G41990
Description CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G41990 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant
protein, group 2 (InterPro:IPR004864); BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.29 -0.33
2 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.9 0.32 -0.3
3 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.3 -0.32
4 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.88 0.32 -0.31
5 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.88 0.31 -0.3
6 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.88 0.31 -0.32
7 AT1G53800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits
to 882 proteins in 242 species: Archae - 2; Bacteria - 216;
Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other
Eukaryotes - 493 (source: NCBI BLink).		 0.88 0.32 -0.32
8 AT2G14880 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.3
9 AT3G17640 Leucine-rich repeat (LRR) family protein 0.87 0.31 -0.33
10 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.87 0.32 -0.31
11 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.86 0.31 -0.33
12 AT3G62110 Pectin lyase-like superfamily protein 0.86 0.31 -0.32
13 AT1G63840 RING/U-box superfamily protein -0.86 0.31 -0.32
14 AT1G74960 fatty acid biosynthesis 1 ARABIDOPSIS BETA-KETOACYL-ACP
SYNTHETASE 2, fatty acid
biosynthesis 1, BETA-KETOACYL-ACP
SYNTHETASE 2		 0.85 0.32 -0.34
15 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.85 0.33 -0.3
16 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.84 0.31 -0.3
17 AT5G15840 B-box type zinc finger protein with CCT domain CONSTANS, FG 0.84 0.33 -0.32
18 AT3G09580 FAD/NAD(P)-binding oxidoreductase family protein 0.84 0.31 -0.33
19 AT1G54100 aldehyde dehydrogenase 7B4 aldehyde dehydrogenase 7B4 -0.84 0.32 -0.29
20 AT2G29460 glutathione S-transferase tau 4 glutathione S-transferase tau 4,
GLUTATHIONE S-TRANSFERASE 22,
glutathione S-transferase tau 4		 -0.84 0.31 -0.32
21 AT1G72610 germin-like protein 1 A. THALIANA GERMIN-LIKE PROTEIN 1,
germin-like protein 1, GERMIN-LIKE
PROTEIN 1		 0.84 0.32 -0.33
22 AT3G21300 RNA methyltransferase family protein 0.84 0.35 -0.3
23 AT5G20630 germin 3 ARABIDOPSIS THALIANA GERMIN 3,
germin 3, GERMIN-LIKE PROTEIN 3,
GLP3A, GLP3B		 0.84 0.31 -0.29
24 AT2G10940 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.84 0.29 -0.33
25 AT3G08600 Protein of unknown function (DUF1191) 0.84 0.31 -0.32
26 AT1G73090 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.31 -0.31
27 AT2G26080 glycine decarboxylase P-protein 2 glycine decarboxylase P-protein 2,
glycine decarboxylase P-protein 2		 0.83 0.31 -0.31
28 AT3G26570 phosphate transporter 2;1 ORF02, phosphate transporter 2;1 0.83 0.32 -0.3
29 AT2G30890 Cytochrome b561/ferric reductase transmembrane protein
family		 0.83 0.31 -0.33
30 AT4G32570 TIFY domain protein 8 TIFY domain protein 8 0.83 0.32 -0.32
31 AT1G12500 Nucleotide-sugar transporter family protein 0.83 0.31 -0.3
32 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 0.82 0.33 -0.31
33 AT5G18200 UTP:galactose-1-phosphate
uridylyltransferases;ribose-5-phosphate
adenylyltransferases		 -0.82 0.32 -0.31
34 AT4G19380 Long-chain fatty alcohol dehydrogenase family protein 0.82 0.28 -0.33
35 AT3G20250 pumilio 5 pumilio 5, pumilio 5 -0.82 0.32 -0.32
36 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.82 0.34 -0.34
37 AT3G06770 Pectin lyase-like superfamily protein 0.82 0.3 -0.3
38 AT4G12420 Cupredoxin superfamily protein SKU5 0.82 0.32 -0.32
39 AT3G13560 O-Glycosyl hydrolases family 17 protein 0.82 0.33 -0.32
40 AT1G09750 Eukaryotic aspartyl protease family protein 0.82 0.29 -0.3
41 AT3G62390 TRICHOME BIREFRINGENCE-LIKE 6 TRICHOME BIREFRINGENCE-LIKE 6 0.82 0.3 -0.32
42 AT2G02390 glutathione S-transferase zeta 1 glutathione S-transferase zeta 1,
GLUTATHIONE S-TRANSFERASE 18,
glutathione S-transferase zeta 1		 -0.82 0.35 -0.32
43 AT5G02890 HXXXD-type acyl-transferase family protein 0.82 0.31 -0.32
44 AT1G11820 O-Glycosyl hydrolases family 17 protein 0.82 0.32 -0.34
45 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 0.82 0.3 -0.31
46 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.82 0.32 -0.31
47 AT5G61130 plasmodesmata callose-binding protein 1 plasmodesmata callose-binding
protein 1		 0.81 0.31 -0.3
48 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 0.81 0.31 -0.31
49 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.81 0.32 -0.31
50 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.81 0.32 -0.34
51 AT4G30610 alpha/beta-Hydrolases superfamily protein BRI1 SUPPRESSOR 1, SERINE
CARBOXYPEPTIDASE 24 PRECURSOR		 0.81 0.31 -0.32
52 AT1G71080 RNA polymerase II transcription elongation factor -0.81 0.31 -0.32
53 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.81 0.33 -0.31
54 AT3G26490 Phototropic-responsive NPH3 family protein 0.81 0.3 -0.32
55 AT3G42660 transducin family protein / WD-40 repeat family protein 0.81 0.32 -0.3
56 AT1G80380 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.3 -0.3
57 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.81 0.32 -0.31
58 AT1G77450 NAC domain containing protein 32 NAC domain containing protein 32,
NAC domain containing protein 32		 -0.8 0.3 -0.3
59 AT2G30140 UDP-Glycosyltransferase superfamily protein -0.8 0.3 -0.34
60 AT1G45145 thioredoxin H-type 5 THIOREDOXIN H-TYPE 5, thioredoxin
H-type 5, LOCUS OF INSENSITIVITY
TO VICTORIN 1, thioredoxin H-type
5		 -0.8 0.32 -0.32
61 AT5G06860 polygalacturonase inhibiting protein 1 POLYGALACTURONASE INHIBITING
PROTEIN 1, polygalacturonase
inhibiting protein 1		 -0.8 0.3 -0.3
62 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.8 0.31 -0.3
63 AT5G42050 DCD (Development and Cell Death) domain protein -0.8 0.35 -0.32
64 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 -0.8 0.31 -0.33
65 AT1G10140 Uncharacterised conserved protein UCP031279 -0.8 0.32 -0.31
66 AT4G21580 oxidoreductase, zinc-binding dehydrogenase family protein -0.8 0.32 -0.33
67 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 -0.8 0.31 -0.35
68 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.79 0.3 -0.33
69 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.33 -0.3
70 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.79 0.31 -0.3
71 AT1G17490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits
to 45 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.31 -0.32
72 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 -0.79 0.34 -0.31
73 AT1G09500 NAD(P)-binding Rossmann-fold superfamily protein -0.79 0.32 -0.31
74 AT2G15480 UDP-glucosyl transferase 73B5 UDP-glucosyl transferase 73B5 -0.79 0.32 -0.31
75 AT2G42790 citrate synthase 3 citrate synthase 3 -0.78 0.32 -0.31
76 AT1G35190 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.78 0.33 -0.34
77 AT4G02360 Protein of unknown function, DUF538 -0.78 0.31 -0.35
78 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.78 0.31 -0.29
79 AT2G18170 MAP kinase 7 MAP kinase 7, MAP kinase 7 -0.78 0.31 -0.32
80 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.78 0.31 -0.32
81 AT5G62530 aldehyde dehydrogenase 12A1 aldehyde dehydrogenase 12A1,
ARABIDOPSIS THALIANA
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE,
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE		 -0.78 0.3 -0.31
82 AT4G22920 non-yellowing 1 NON-YELLOWING 1, NON-YELLOWING 1 -0.78 0.31 -0.3
83 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.78 0.32 -0.31
84 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.78 0.33 -0.32
85 AT2G37760 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C8		 -0.78 0.32 -0.33
86 AT4G16190 Papain family cysteine protease -0.78 0.32 -0.31
87 AT5G61820 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod
19 (InterPro:IPR011692); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.77 0.31 -0.32
88 AT4G31240 protein kinase C-like zinc finger protein -0.77 0.31 -0.32
89 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.77 0.31 -0.31
90 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.77 0.32 -0.28
91 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.77 0.29 -0.32
92 AT2G37770 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C9, Chloroplastic aldo-keto
reductase		 -0.77 0.29 -0.31
93 AT2G15490 UDP-glycosyltransferase 73B4 UDP-glycosyltransferase 73B4 -0.77 0.31 -0.32
94 AT1G07040 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in
187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140
(source: NCBI BLink).		 -0.77 0.3 -0.32
95 AT4G19230 cytochrome P450, family 707, subfamily A, polypeptide 1 cytochrome P450, family 707,
subfamily A, polypeptide 1		 -0.76 0.32 -0.29
96 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.76 0.31 -0.32
97 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.76 0.32 -0.31
98 AT4G01610 Cysteine proteinases superfamily protein -0.76 0.3 -0.31
99 AT5G24090 chitinase A chitinase A, chitinase A -0.76 0.32 -0.3
100 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 -0.76 0.31 -0.32
101 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E		 -0.75 0.29 -0.31
102 AT5G67340 ARM repeat superfamily protein -0.75 0.3 -0.32
103 AT2G24180 cytochrome p450 71b6 cytochrome p450 71b6 -0.75 0.33 -0.32
104 AT1G67300 Major facilitator superfamily protein -0.75 0.33 -0.3
105 AT5G39520 Protein of unknown function (DUF1997) -0.75 0.31 -0.32
106 AT5G10730 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.29 -0.33
107 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.75 0.32 -0.31
108 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.75 0.34 -0.3
109 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.75 0.32 -0.31
110 AT4G15490 UDP-Glycosyltransferase superfamily protein UGT84A3 -0.75 0.3 -0.3
111 AT1G60730 NAD(P)-linked oxidoreductase superfamily protein -0.75 0.31 -0.33
112 AT3G11420 Protein of unknown function (DUF604) -0.75 0.32 -0.33
113 AT5G63790 NAC domain containing protein 102 NAC domain containing protein 102,
NAC domain containing protein 102		 -0.74 0.33 -0.32
114 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.74 0.29 -0.3
115 AT1G62570 flavin-monooxygenase glucosinolate S-oxygenase 4 flavin-monooxygenase glucosinolate
S-oxygenase 4		 -0.74 0.32 -0.33
116 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.74 0.32 -0.3
117 AT4G33540 metallo-beta-lactamase family protein -0.74 0.31 -0.32
118 AT5G22630 arogenate dehydratase 5 arogenate dehydratase 5 -0.74 0.32 -0.31
119 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.74 0.32 -0.29
120 AT3G46110 Domain of unknown function (DUF966) -0.74 0.32 -0.31
121 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.74 0.33 -0.33
122 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 -0.74 0.32 -0.33
123 AT4G22820 A20/AN1-like zinc finger family protein -0.74 0.34 -0.33
124 AT3G12490 cystatin B ARABIDOPSIS THALIANA PHYTOCYSTATIN
6, cystatin B, cystatin B		 -0.74 0.3 -0.31