AT2G42060 : -
Query Information
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AGICode AT2G42060
Description Cysteine/Histidine-rich C1 domain family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 1 0.33 -0.3
2 AT2G13940 transposable element gene 0.82 0.32 -0.31
3 AT2G15750 transposable element gene 0.79 0.32 -0.3
4 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.73 0.33 -0.32
5 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 -0.73 0.32 -0.32
6 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein 0.72 0.3 -0.3
7 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.72 0.3 -0.29
8 AT5G35640 Putative endonuclease or glycosyl hydrolase 0.72 0.31 -0.3
9 AT4G14550 indole-3-acetic acid inducible 14 indole-3-acetic acid inducible 14,
SOLITARY ROOT		 -0.72 0.32 -0.32
10 AT1G30710 FAD-binding Berberine family protein -0.72 0.33 -0.32
11 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.33 -0.33
12 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.71 0.29 -0.32
13 AT5G36950 DegP protease 10 DegP protease 10 0.71 0.29 -0.33
14 AT2G29820 Galactose oxidase/kelch repeat superfamily protein 0.71 0.31 -0.31
15 AT5G25160 zinc finger protein 3 zinc finger protein 3 0.71 0.32 -0.33
16 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.71 0.32 -0.32
17 AT4G33450 myb domain protein 69 MYB DOMAIN PROTEIN 69, myb domain
protein 69		 0.71 0.3 -0.32
18 AT2G16210 Transcriptional factor B3 family protein 0.71 0.32 -0.35
19 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.71 0.31 -0.31
20 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.7 0.31 -0.29
21 AT2G03260 EXS (ERD1/XPR1/SYG1) family protein 0.7 0.3 -0.3
22 AT1G14020 O-fucosyltransferase family protein 0.7 0.32 -0.32
23 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.31 -0.3
24 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 0.7 0.31 -0.32
25 AT1G79780 Uncharacterised protein family (UPF0497) 0.7 0.34 -0.32
26 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12		 0.7 0.31 -0.31
27 AT5G06480 Immunoglobulin E-set superfamily protein -0.69 0.31 -0.31
28 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.69 0.32 -0.32
29 AT2G04330 transposable element gene 0.69 0.31 -0.32
30 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.33 -0.33
31 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.69 0.32 -0.31
32 AT3G51520 diacylglycerol acyltransferase family -0.69 0.31 -0.32
33 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 0.69 0.34 -0.31
34 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.68 0.3 -0.34
35 AT2G11650 transposable element gene 0.68 0.32 -0.33
36 AT2G40410 Staphylococcal nuclease homologue -0.68 0.32 -0.32
37 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 0.68 0.32 -0.32
38 AT5G38910 RmlC-like cupins superfamily protein 0.68 0.3 -0.33
39 AT4G10260 pfkB-like carbohydrate kinase family protein 0.68 0.31 -0.33
40 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.33 -0.32
41 AT1G31760 SWIB/MDM2 domain superfamily protein -0.68 0.3 -0.31
42 AT5G35820 transposable element gene -0.68 0.33 -0.29
43 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.31
44 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.67 0.35 -0.32
45 AT5G13380 Auxin-responsive GH3 family protein 0.67 0.33 -0.32
46 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.67 0.32 -0.33
47 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 -0.67 0.32 -0.32
48 AT2G42450 alpha/beta-Hydrolases superfamily protein 0.67 0.32 -0.34
49 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 -0.67 0.29 -0.33
50 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.3 -0.31
51 AT1G05550 Protein of unknown function (DUF295) 0.66 0.31 -0.32
52 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 0.66 0.33 -0.3
53 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.3 -0.3
54 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.31 -0.32
55 AT2G11590 transposable element gene 0.66 0.3 -0.32
56 AT1G13810 Restriction endonuclease, type II-like superfamily protein 0.66 0.31 -0.31
57 AT2G44260 Plant protein of unknown function (DUF946) -0.66 0.33 -0.32
58 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 0.66 0.34 -0.31
59 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.66 0.29 -0.3
60 AT4G23950 Galactose-binding protein 0.66 0.32 -0.33
61 AT2G15340 glycine-rich protein 0.66 0.33 -0.32
62 AT1G77820 transposable element gene 0.65 0.31 -0.32
63 AT3G62230 F-box family protein DUO1-activated F-box 1 -0.65 0.31 -0.34
64 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.31
65 AT1G35380 transposable element gene -0.65 0.29 -0.31
66 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.65 0.31 -0.31
67 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI 0.65 0.33 -0.35
68 AT3G44770 Protein of unknown function (DUF626) 0.65 0.29 -0.31
69 AT2G14020 transposable element gene 0.65 0.32 -0.32
70 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.65 0.31 -0.29
71 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.33 -0.3
72 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 0.65 0.34 -0.32
73 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 0.65 0.32 -0.31
74 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.33 -0.32
75 AT5G44970 Protein with RNI-like/FBD-like domains 0.64 0.32 -0.35
76 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.33 -0.31
77 AT2G28690 Protein of unknown function (DUF1635) 0.64 0.32 -0.32
78 AT4G14460 transposable element gene 0.64 0.3 -0.31
79 AT2G25720 unknown protein; Has 38 Blast hits to 38 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.33
80 AT4G32750 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.32 -0.31
81 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.64 0.31 -0.31
82 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 0.64 0.31 -0.32
83 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.64 0.31 -0.32
84 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.64 0.34 -0.32
85 AT2G05180 cytochrome P450, family 705, subfamily A, polypeptide 6 cytochrome P450, family 705,
subfamily A, polypeptide 6		 0.63 0.31 -0.33
86 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.63 0.32 -0.31
87 AT1G21290 transposable element gene 0.63 0.32 -0.32
88 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.63 0.3 -0.31
89 AT5G30480 transposable element gene -0.62 0.31 -0.33
90 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 -0.62 0.31 -0.33
91 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 -0.62 0.3 -0.3
92 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.62 0.32 -0.31
93 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 -0.61 0.31 -0.3
94 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 -0.61 0.31 -0.3
95 AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.3 -0.32
96 AT2G44150 histone-lysine N-methyltransferase ASHH3 histone-lysine N-methyltransferase
ASHH3, SET DOMAIN-CONTAINING
PROTEIN 7		 -0.6 0.31 -0.3
97 AT4G36790 Major facilitator superfamily protein -0.6 0.31 -0.31
98 AT4G22070 WRKY DNA-binding protein 31 ATWRKY31, WRKY DNA-binding protein
31		 -0.59 0.32 -0.32
99 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 -0.59 0.32 -0.29
100 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.31
101 AT3G50120 Plant protein of unknown function (DUF247) -0.59 0.3 -0.31
102 AT1G25240 ENTH/VHS/GAT family protein -0.59 0.31 -0.32
103 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.59 0.32 -0.32
104 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.29
105 AT3G28490 Oxoglutarate/iron-dependent oxygenase -0.59 0.32 -0.33
106 AT4G39753 Galactose oxidase/kelch repeat superfamily protein -0.58 0.3 -0.31
107 AT4G08560 pumilio 15 pumilio 15, pumilio 15 -0.58 0.3 -0.31
108 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.58 0.3 -0.32
109 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 -0.58 0.32 -0.3
110 AT1G32270 syntaxin, putative ATSYP24, SYNTAXIN 24 -0.58 0.34 -0.3
111 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.32 -0.32
112 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 -0.57 0.32 -0.34
113 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.57 0.31 -0.31
114 AT4G33020 ZIP metal ion transporter family ATZIP9, ZIP9 -0.57 0.28 -0.33
115 AT4G33900 Galactose oxidase/kelch repeat superfamily protein -0.57 0.31 -0.3
116 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 -0.57 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.65 0.47 -0.44 C0011
118 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - 0.63 0.31 -0.31