AGICode | AT2G39705 |
Description | ROTUNDIFOLIA like 8 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G39705 | ROTUNDIFOLIA like 8 | DEVIL 11, ROTUNDIFOLIA like 8 | 1 | 0.33 | -0.29 | ||
2 | AT2G47120 | NAD(P)-binding Rossmann-fold superfamily protein | -0.73 | 0.32 | -0.33 | |||
3 | AT4G00660 | RNAhelicase-like 8 | ATRH8, RNAhelicase-like 8 | 0.69 | 0.32 | -0.33 | ||
4 | AT2G33620 | AT hook motif DNA-binding family protein | -0.67 | 0.33 | -0.32 | |||
5 | AT5G53280 | plastid division1 | PLASTID DIVISION1 | -0.65 | 0.34 | -0.31 | ||
6 | AT3G45480 | RING/U-box protein with C6HC-type zinc finger | -0.64 | 0.34 | -0.32 | |||
7 | AT1G68810 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.64 | 0.33 | -0.32 | |||
8 | AT3G44730 | kinesin-like protein 1 | AtKIN14h, ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 |
-0.63 | 0.32 | -0.28 | ||
9 | AT4G34430 | DNA-binding family protein | SWITCH/SUCROSE NONFERMENTING 3D, CHB3 |
0.63 | 0.32 | -0.32 | ||
10 | AT5G63610 | cyclin-dependent kinase E;1 | ATCDK8, cyclin-dependent kinase E;1, HUA ENHANCER 3 |
0.63 | 0.31 | -0.33 | ||
11 | AT1G15920 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.62 | 0.31 | -0.3 | |||
12 | AT5G64780 | Uncharacterised conserved protein UCP009193 | -0.62 | 0.3 | -0.31 | |||
13 | AT1G32600 | F-box associated ubiquitination effector family protein | -0.62 | 0.31 | -0.35 | |||
14 | AT3G52890 | KCBP-interacting protein kinase | KCBP-interacting protein kinase | 0.62 | 0.29 | -0.31 | ||
15 | AT4G00890 | proline-rich family protein | -0.62 | 0.31 | -0.31 | |||
16 | AT2G31970 | DNA repair-recombination protein (RAD50) | ATRAD50, RAD50 | 0.61 | 0.32 | -0.33 | ||
17 | AT3G55590 | Glucose-1-phosphate adenylyltransferase family protein | -0.61 | 0.34 | -0.33 | |||
18 | AT5G60100 | pseudo-response regulator 3 | pseudo-response regulator 3, pseudo-response regulator 3 |
0.61 | 0.31 | -0.3 | ||
19 | AT5G57340 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.6 | 0.33 | -0.31 | |||
20 | AT1G50700 | calcium-dependent protein kinase 33 | calcium-dependent protein kinase 33 |
0.6 | 0.33 | -0.3 | ||
21 | AT2G02160 | CCCH-type zinc finger family protein | 0.6 | 0.31 | -0.33 | |||
22 | AT4G32220 | transposable element gene | 0.6 | 0.32 | -0.32 | |||
23 | AT3G42250 | transposable element gene | -0.6 | 0.32 | -0.32 | |||
24 | AT2G35100 | Exostosin family protein | ARABINAN DEFICIENT 1 | 0.59 | 0.28 | -0.33 | ||
25 | AT1G02450 | NIM1-interacting 1 | NIMIN-1, NIM1-interacting 1 | -0.59 | 0.31 | -0.32 | ||
26 | AT1G65870 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.59 | 0.33 | -0.31 | |||
27 | AT1G71760 | unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
-0.59 | 0.33 | -0.32 | |||
28 | AT5G28500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.59 | 0.32 | -0.33 | |||
29 | AT5G35900 | LOB domain-containing protein 35 | LOB domain-containing protein 35 | -0.58 | 0.31 | -0.31 | ||
30 | AT1G32480 | isocitrate dehydrogenase IV | isocitrate dehydrogenase IV | 0.58 | 0.32 | -0.32 | ||
31 | AT4G16180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.58 | 0.3 | -0.32 | |||
32 | AT5G66360 | Ribosomal RNA adenine dimethylase family protein | adenosine dimethyl transferase 1B | 0.58 | 0.32 | -0.33 | ||
33 | AT5G11040 | TRS120 | AtTRS120, TRS120 | 0.58 | 0.31 | -0.31 | ||
34 | AT5G39940 | FAD/NAD(P)-binding oxidoreductase family protein | -0.58 | 0.31 | -0.32 | |||
35 | AT4G23330 | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
36 | AT1G59670 | glutathione S-transferase TAU 15 | glutathione S-transferase TAU 15, glutathione S-transferase TAU 15 |
-0.57 | 0.31 | -0.3 | ||
37 | AT2G20805 | BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G11510.1); Has 47 Blast hits to 47 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.3 | -0.33 | |||
38 | AT2G36080 | AP2/B3-like transcriptional factor family protein | 0.57 | 0.32 | -0.32 | |||
39 | AT5G41730 | Protein kinase family protein | 0.57 | 0.3 | -0.3 | |||
40 | AT1G53325 | F-box associated ubiquitination effector family protein | -0.57 | 0.29 | -0.3 | |||
41 | AT4G35725 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal; EXPRESSED DURING: 4 anthesis, C globular stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.57 | 0.32 | -0.31 | |||
42 | AT2G46480 | galacturonosyltransferase 2 | galacturonosyltransferase 2, GALACTURONOSYLTRANSFERASE 2 |
-0.57 | 0.31 | -0.32 | ||
43 | AT1G35740 | pseudogene, similar to putative beta-1,3-glucan synthase, blastp match of 57% identity and 2.1e-14 P-value to GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative beta-1,3-glucan synthase {Nicotiana alata} |
-0.57 | 0.3 | -0.33 | |||
44 | AT2G47860 | Phototropic-responsive NPH3 family protein | SETH6 | -0.57 | 0.28 | -0.3 | ||
45 | AT1G53360 | F-box associated ubiquitination effector family protein | -0.57 | 0.3 | -0.31 | |||
46 | AT2G28840 | XB3 ortholog 1 in Arabidopsis thaliana | XB3 ortholog 1 in Arabidopsis thaliana |
0.56 | 0.31 | -0.3 | ||
47 | AT3G61450 | syntaxin of plants 73 | ATSYP73, syntaxin of plants 73 | -0.56 | 0.33 | -0.31 | ||
48 | AT1G63980 | D111/G-patch domain-containing protein | 0.56 | 0.32 | -0.33 | |||
49 | AT1G16705 | p300/CBP acetyltransferase-related protein-related | -0.56 | 0.31 | -0.33 | |||
50 | AT5G27320 | alpha/beta-Hydrolases superfamily protein | ATGID1C, GA INSENSITIVE DWARF1C | 0.56 | 0.31 | -0.31 | ||
51 | AT4G25680 | PPPDE putative thiol peptidase family protein | -0.56 | 0.34 | -0.32 | |||
52 | AT1G50470 | F-box associated ubiquitination effector family protein | 0.56 | 0.32 | -0.34 | |||
53 | AT1G12120 | Plant protein of unknown function (DUF863) | 0.56 | 0.33 | -0.33 | |||
54 | AT4G35800 | RNA polymerase II large subunit | RNA polymerase II large subunit, RNA POLYMERASE II LARGE SUBUNIT, RNA_POL_II_LSRNA_POL_II_LS, RNA POLYMERASE II LARGE SUBUNIT |
0.56 | 0.31 | -0.29 | ||
55 | AT4G17860 | Protein of Unknown Function (DUF239) | -0.55 | 0.31 | -0.32 | |||
56 | AT5G33350 | pseudogene, similar to P0406H10.5, nucleoid DNA-binding protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996; blastp match of 37% identity and 1.5e-57 P-value to GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza sativa (japonica cultivar-group)} |
-0.55 | 0.31 | -0.33 | |||
57 | AT1G15900 | unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.55 | 0.31 | -0.32 | |||
58 | AT3G42340 | transposable element gene | -0.55 | 0.33 | -0.31 | |||
59 | AT4G11080 | HMG (high mobility group) box protein | 3xHigh Mobility Group-box1 | -0.55 | 0.31 | -0.31 | ||
60 | AT4G16030 | Ribosomal protein L19e family protein | -0.54 | 0.33 | -0.32 | |||
61 | AT4G19600 | Cyclin family protein | CYCT1;4 | 0.54 | 0.31 | -0.32 | ||
62 | AT2G45460 | SMAD/FHA domain-containing protein | 0.54 | 0.31 | -0.31 | |||
63 | AT2G31500 | calcium-dependent protein kinase 24 | calcium-dependent protein kinase 24 |
-0.54 | 0.32 | -0.31 | ||
64 | AT2G45040 | Matrixin family protein | -0.54 | 0.33 | -0.31 | |||
65 | AT1G34240 | transposable element gene | -0.54 | 0.35 | -0.33 | |||
66 | AT1G69080 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.54 | 0.32 | -0.31 | |||
67 | AT1G16560 | Per1-like family protein | -0.54 | 0.32 | -0.32 | |||
68 | AT4G04550 | transposable element gene | 0.54 | 0.29 | -0.32 | |||
69 | AT5G45190 | Cyclin family protein | 0.54 | 0.32 | -0.3 | |||
70 | AT3G30260 | AGAMOUS-like 79 | AGAMOUS-like 79 | -0.54 | 0.34 | -0.32 | ||
71 | AT1G49015 | DPP6 N-terminal domain-like protein | 0.53 | 0.32 | -0.3 | |||
72 | AT5G66030 | Golgi-localized GRIP domain-containing protein | ATGRIP, GRIP | 0.53 | 0.33 | -0.3 | ||
73 | AT1G05800 | alpha/beta-Hydrolases superfamily protein | DONGLE | 0.53 | 0.31 | -0.34 | ||
74 | AT5G47580 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
ALTERED SEED GERMINATION 7 | 0.52 | 0.31 | -0.34 | ||
75 | AT2G07280 | unknown protein; Has 19 Blast hits to 19 proteins in 3 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.3 | -0.31 | |||
76 | AT1G52830 | indole-3-acetic acid 6 | indole-3-acetic acid 6, SHORT HYPOCOTYL 1 |
-0.52 | 0.3 | -0.31 | ||
77 | AT4G15230 | pleiotropic drug resistance 2 | ATP-binding cassette G30, ATPDR2, pleiotropic drug resistance 2 |
0.52 | 0.3 | -0.29 | ||
78 | AT4G14720 | TIFY domain/Divergent CCT motif family protein | PEAPOD 2, TIFY4B | 0.52 | 0.32 | -0.3 | ||
79 | AT5G38440 | Plant self-incompatibility protein S1 family | -0.52 | 0.32 | -0.29 | |||
80 | AT2G05930 | transposable element gene | 0.52 | 0.34 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
81 | C0059 | Arginine amide | - | - | - | -0.67 | 0.43 | -0.45 |