AT2G42240 : -
Query Information
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AGICode AT2G42240
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.31
2 AT3G62610 myb domain protein 11 myb domain protein 11, myb domain
protein 11, PRODUCTION OF FLAVONOL
GLYCOSIDES 2		 -0.7 0.31 -0.31
3 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 0.7 0.31 -0.31
4 AT2G43480 Peroxidase superfamily protein -0.69 0.33 -0.31
5 AT2G27290 Protein of unknown function (DUF1279) 0.67 0.32 -0.32
6 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 -0.65 0.3 -0.29
7 AT5G02310 proteolysis 6 proteolysis 6 0.65 0.3 -0.31
8 AT2G23410 cis-prenyltransferase cis-prenyltransferase,
cis-prenyltransferase		 -0.65 0.32 -0.29
9 AT2G44530 Phosphoribosyltransferase family protein 0.64 0.33 -0.31
10 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 0.63 0.3 -0.31
11 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.63 0.32 -0.31
12 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.63 0.33 -0.31
13 AT1G74550 cytochrome P450, family 98, subfamily A, polypeptide 9 cytochrome P450, family 98,
subfamily A, polypeptide 9		 -0.63 0.3 -0.31
14 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 -0.62 0.31 -0.31
15 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.33
16 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.62 0.31 -0.32
17 AT4G02670 indeterminate(ID)-domain 12 indeterminate(ID)-domain 12,
indeterminate(ID)-domain 12		 0.62 0.3 -0.3
18 AT5G66390 Peroxidase superfamily protein -0.61 0.31 -0.31
19 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.61 0.3 -0.3
20 AT5G41960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.32 -0.3
21 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.61 0.3 -0.33
22 AT1G55820 Kinase-related protein of unknown function (DUF1296) -0.61 0.31 -0.3
23 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.31
24 AT5G43040 Cysteine/Histidine-rich C1 domain family protein -0.6 0.34 -0.31
25 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 0.6 0.34 -0.34
26 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.31 -0.32
27 AT1G53270 ABC-2 type transporter family protein ATP-binding cassette G10 -0.59 0.33 -0.31
28 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.59 0.33 -0.32
29 AT3G30585 transposable element gene 0.59 0.32 -0.29
30 AT3G18770 Autophagy-related protein 13 -0.58 0.33 -0.32
31 AT3G13965 pseudogene, hypothetical protein -0.58 0.32 -0.32
32 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.33 -0.33
33 AT2G40815 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.58 0.33 -0.31
34 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 -0.58 0.32 -0.32
35 AT3G10400 RNA recognition motif and CCHC-type zinc finger domains
containing protein		 U11/U12-31K 0.57 0.33 -0.33
36 AT5G22600 FBD / Leucine Rich Repeat domains containing protein 0.57 0.31 -0.32
37 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.3 -0.3
38 AT2G42860 unknown protein; Has 446 Blast hits to 326 proteins in 94
species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi -
93; Plants - 21; Viruses - 4; Other Eukaryotes - 183
(source: NCBI BLink).		 0.56 0.32 -0.3
39 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.56 0.32 -0.32
40 AT5G62600 ARM repeat superfamily protein modifier of snc1-1, 14 -0.56 0.31 -0.31
41 AT1G19930 Galactose oxidase/kelch repeat superfamily protein -0.56 0.32 -0.31
42 AT1G21950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G21940.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.3 -0.32
43 AT5G49270 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE 9, DEFORMED ROOT HAIRS
9, MUTANT ROOT HAIR 4, SHAVEN 2		 -0.56 0.32 -0.32
44 AT1G68940 Armadillo/beta-catenin-like repeat family protein -0.56 0.33 -0.31
45 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.56 0.3 -0.32
46 AT5G07190 seed gene 3 seed gene 3 -0.56 0.31 -0.32
47 AT5G26960 Galactose oxidase/kelch repeat superfamily protein 0.56 0.32 -0.33
48 AT3G58970 magnesium transporter 6 magnesium transporter 6, MRS2-4 0.55 0.31 -0.31
49 AT2G41300 strictosidine synthase-like 1 strictosidine synthase-like 1 -0.55 0.32 -0.32
50 AT3G13140 hydroxyproline-rich glycoprotein family protein 0.55 0.32 -0.32
51 AT3G30620 transposable element gene -0.55 0.31 -0.28
52 AT5G50410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.32 -0.3
53 AT1G03840 C2H2 and C2HC zinc fingers superfamily protein Magpie -0.55 0.31 -0.31
54 AT1G49490 Leucine-rich repeat (LRR) family protein -0.54 0.32 -0.3
55 AT4G05240 Ubiquitin-like superfamily protein -0.54 0.32 -0.33
56 AT4G07600 transposable element gene -0.54 0.3 -0.32
57 AT1G63590 Receptor-like protein kinase-related family protein 0.54 0.31 -0.33
58 AT3G27510 Cysteine/Histidine-rich C1 domain family protein -0.54 0.33 -0.31
59 AT4G04530 transposable element gene 0.54 0.31 -0.33
60 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.54 0.32 -0.31
61 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 0.53 0.3 -0.29
62 AT4G30660 Low temperature and salt responsive protein family 0.53 0.31 -0.32
63 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.32 -0.33
64 AT3G45820 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
65 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.59 0.3 -0.33 C0008
66 C0219 Pyroglutamic acid (2R,2S)-Pyroglutamic acid 5-Oxoproline gamma-glutamyl cycle (plant pathway),
gamma-glutamyl cycle 		0.58 0.33 -0.31 C0219