AT2G42270 : -
Query Information
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AGICode AT2G42270
Description U5 small nuclear ribonucleoprotein helicase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42270 U5 small nuclear ribonucleoprotein helicase 1 0.34 -0.31
2 AT4G33200 myosin, putative MYOSIN XI I, MYOSIN XI-15, XI-I 0.74 0.35 -0.3
3 AT5G54160 O-methyltransferase 1 O-methyltransferase 1,
O-methyltransferase 1		 -0.7 0.31 -0.3
4 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 0.7 0.29 -0.32
5 AT2G21380 Kinesin motor family protein 0.69 0.32 -0.32
6 AT4G10120 Sucrose-phosphate synthase family protein ATSPS4F 0.68 0.31 -0.34
7 AT1G70620 cyclin-related 0.68 0.33 -0.32
8 AT4G38380 MATE efflux family protein 0.67 0.31 -0.29
9 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 0.67 0.33 -0.3
10 AT1G10640 Pectin lyase-like superfamily protein 0.65 0.3 -0.3
11 AT5G14760 L-aspartate oxidase L-aspartate oxidase 0.65 0.31 -0.32
12 AT1G28710 Nucleotide-diphospho-sugar transferase family protein 0.65 0.32 -0.33
13 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.65 0.31 -0.3
14 AT2G34770 fatty acid hydroxylase 1 ARABIDOPSIS FATTY ACID HYDROXYLASE
1, fatty acid hydroxylase 1		 0.65 0.32 -0.33
15 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.65 0.33 -0.29
16 AT2G41810 Protein of unknown function, DUF642 -0.64 0.31 -0.33
17 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.64 0.33 -0.32
18 AT4G11010 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 -0.63 0.31 -0.32
19 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 0.63 0.31 -0.33
20 AT4G18130 phytochrome E phytochrome E 0.63 0.3 -0.31
21 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1		 0.62 0.31 -0.31
22 AT3G45950 Pre-mRNA splicing Prp18-interacting factor 0.62 0.28 -0.31
23 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.61 0.33 -0.3
24 AT3G51150 ATP binding microtubule motor family protein 0.61 0.31 -0.3
25 AT5G45280 Pectinacetylesterase family protein -0.6 0.33 -0.33
26 AT2G44480 beta glucosidase 17 beta glucosidase 17 -0.6 0.31 -0.29
27 AT1G20720 RAD3-like DNA-binding helicase protein 0.6 0.3 -0.31
28 AT3G05120 alpha/beta-Hydrolases superfamily protein GA INSENSITIVE DWARF1A, GA
INSENSITIVE DWARF1A		 -0.6 0.31 -0.31
29 AT3G20070 titan9 TITAN9 0.6 0.33 -0.31
30 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.3 -0.29
31 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.59 0.3 -0.32
32 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.59 0.33 -0.3
33 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.59 0.3 -0.34
34 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.59 0.31 -0.32
35 AT4G24900 unknown protein; Has 119 Blast hits to 96 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.59 0.34 -0.31
36 AT3G47800 Galactose mutarotase-like superfamily protein -0.58 0.32 -0.31
37 AT2G20660 ralf-like 14 ralf-like 14 -0.58 0.32 -0.31
38 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.58 0.31 -0.3
39 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.3
40 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family 0.58 0.3 -0.31
41 AT2G16660 Major facilitator superfamily protein -0.58 0.31 -0.33
42 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.58 0.3 -0.33
43 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.57 0.32 -0.31
44 AT4G26630 DEK domain-containing chromatin associated protein 0.57 0.34 -0.33
45 AT3G05370 receptor like protein 31 receptor like protein 31, receptor
like protein 31		 0.56 0.31 -0.31
46 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 -0.56 0.33 -0.33
47 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.56 0.3 -0.3
48 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.56 0.3 -0.31
49 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.35 -0.31
50 AT5G12430 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 16 0.56 0.31 -0.33
51 AT2G47780 Rubber elongation factor protein (REF) -0.56 0.32 -0.31
52 AT3G09160 RNA-binding (RRM/RBD/RNP motifs) family protein 0.55 0.32 -0.32
53 AT2G41020 WW domain-containing protein 0.55 0.31 -0.31
54 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.55 0.32 -0.3
55 AT5G04650 transposable element gene 0.55 0.31 -0.29
56 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 -0.55 0.28 -0.31
57 AT5G56730 Insulinase (Peptidase family M16) protein 0.54 0.29 -0.32
58 AT4G08290 nodulin MtN21 /EamA-like transporter family protein -0.54 0.33 -0.33
59 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.33 -0.32
60 AT1G61620 phosphoinositide binding -0.54 0.31 -0.32
61 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.54 0.3 -0.32
62 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.54 0.32 -0.31
63 AT3G15610 Transducin/WD40 repeat-like superfamily protein -0.53 0.31 -0.3
64 AT1G64440 NAD(P)-binding Rossmann-fold superfamily protein ROOT EPIDERMAL BULGER1, ROOT HAIR
DEFECTIVE 1, UDP-GLUCOSE
4-EPIMERASE		 0.53 0.31 -0.32
65 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.53 0.32 -0.3
66 AT2G05610 transposable element gene 0.53 0.31 -0.32
67 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein 0.53 0.33 -0.31
68 AT2G23470 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 4 0.53 0.3 -0.3
69 AT1G01010 NAC domain containing protein 1 NAC domain containing protein 1,
NAC domain containing protein 1		 -0.52 0.34 -0.33
70 AT2G43890 Pectin lyase-like superfamily protein -0.52 0.34 -0.29
71 AT4G16050 Aminotransferase-like, plant mobile domain family protein -0.52 0.32 -0.33
72 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1		 -0.52 0.33 -0.3
73 AT2G29995 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.33 -0.31
74 AT3G22640 cupin family protein PAP85 -0.5 0.28 -0.31
75 AT2G30860 glutathione S-transferase PHI 9 ATGSTF7, glutathione S-transferase
PHI 9, GLUTTR, glutathione
S-transferase PHI 9		 -0.49 0.31 -0.31
76 AT5G46050 peptide transporter 3 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 3, peptide transporter
3		 -0.49 0.32 -0.33
77 AT5G20460 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.49 0.32 -0.3
78 AT1G60180 pseudogene of F-box family protein -0.49 0.3 -0.31
79 AT4G39480 cytochrome P450, family 96, subfamily A, polypeptide 9 cytochrome P450, family 96,
subfamily A, polypeptide 9		 -0.48 0.33 -0.33
80 AT5G42840 Cysteine/Histidine-rich C1 domain family protein -0.48 0.32 -0.31
81 AT5G63910 farnesylcysteine lyase farnesylcysteine lyase -0.48 0.32 -0.32
82 AT4G02490 transposable element gene -0.48 0.3 -0.32
83 AT1G68880 basic leucine-zipper 8 basic leucine-zipper 8, basic
leucine-zipper 8		 -0.48 0.32 -0.3
84 AT2G03470 ELM2 domain-containing protein -0.48 0.32 -0.31
85 AT2G44240 Protein of Unknown Function (DUF239) -0.48 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.75 0.48 -0.49 C0010
87 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.75 0.44 -0.46 C0256
88 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.74 0.47 -0.43 C0227
89 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis 0.64 0.32 -0.31 C0235
90 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		0.62 0.45 -0.43