C0115 : Homoserine
Query Information
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ID C0115
Compound name Homoserine
External link   http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=HOMO-SER
Pathway Information homoserine biosynthesis,
threonine biosynthesis from homoserine,
methionine biosynthesis II
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G09570 Cox19-like CHCH family protein 0.73 0.33 -0.34
2 AT5G60690 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 INTERFASCICULAR FIBERLESS,
INTERFASCICULAR FIBERLESS 1,
REVOLUTA		 -0.67 0.32 -0.29
3 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 0.66 0.32 -0.32
4 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.31 -0.31
5 AT1G35380 transposable element gene 0.62 0.32 -0.3
6 AT3G62170 VANGUARD 1 homolog 2 VANGUARD 1 homolog 2 -0.62 0.31 -0.31
7 AT1G65080 Membrane insertion protein, OxaA/YidC with
tetratricopeptide repeat domain		 0.62 0.3 -0.34
8 AT3G49250 defective in meristem silencing 3 DEFECTIVE IN MERISTEM SILENCING 3,
INVOLVED IN DE NOVO 1		 -0.62 0.34 -0.32
9 AT4G27580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, cell wall; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.29 -0.3
10 AT5G44820 Nucleotide-diphospho-sugar transferase family protein 0.6 0.33 -0.31
11 AT3G22060 Receptor-like protein kinase-related family protein 0.6 0.32 -0.31
12 AT1G36095 DNA binding -0.59 0.31 -0.33
13 AT4G38620 myb domain protein 4 myb domain protein 4, myb domain
protein 4		 0.59 0.3 -0.31
14 AT2G16730 glycosyl hydrolase family 35 protein beta-galactosidase 13 0.59 0.34 -0.32
15 AT5G04110 DNA GYRASE B3 DNA GYRASE B3 -0.59 0.3 -0.34
16 AT3G48900 single-stranded DNA endonuclease family protein -0.58 0.31 -0.32
17 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 -0.58 0.33 -0.31
18 AT3G42730 transposable element gene 0.57 0.3 -0.31
19 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 0.57 0.33 -0.32
20 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.57 0.32 -0.3
21 AT3G32090 WRKY family transcription factor 0.56 0.32 -0.32
22 AT4G16890 disease resistance protein (TIR-NBS-LRR class), putative BALL, SUPPRESSOR OF NPR1-1,
CONSTITUTIVE 1		 0.56 0.32 -0.35
23 AT2G48030 DNAse I-like superfamily protein 0.56 0.34 -0.29
24 AT5G22980 serine carboxypeptidase-like 47 serine carboxypeptidase-like 47 -0.56 0.32 -0.34
25 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein 0.56 0.31 -0.32
26 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 0.56 0.31 -0.31
27 AT4G03330 syntaxin of plants 123 ATSYP123, syntaxin of plants 123 -0.55 0.31 -0.32
28 AT1G32930 Galactosyltransferase family protein -0.55 0.31 -0.32
29 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 -0.55 0.31 -0.31
30 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 0.54 0.3 -0.33
31 AT2G25420 transducin family protein / WD-40 repeat family protein -0.54 0.29 -0.32
32 AT1G04930 hydroxyproline-rich glycoprotein family protein 0.53 0.28 -0.3
33 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.53 0.3 -0.31
34 AT1G63690 SIGNAL PEPTIDE PEPTIDASE-LIKE 2 SIGNAL PEPTIDE PEPTIDASE-LIKE 2,
SIGNAL PEPTIDE PEPTIDASE-LIKE 2		 -0.53 0.3 -0.3
35 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein -0.53 0.33 -0.3
36 AT5G43200 Zinc finger, C3HC4 type (RING finger) family protein 0.52 0.31 -0.32
37 AT2G23945 Eukaryotic aspartyl protease family protein -0.51 0.32 -0.33
38 AT5G47250 LRR and NB-ARC domains-containing disease resistance
protein		 -0.51 0.31 -0.31
39 AT1G20380 Prolyl oligopeptidase family protein -0.51 0.32 -0.32
40 AT1G10870 ARF-GAP domain 4 ARF-GAP domain 4 -0.51 0.32 -0.32
41 AT1G59530 basic leucine-zipper 4 basic leucine-zipper 4, basic
leucine-zipper 4		 -0.51 0.31 -0.34
42 AT1G64470 Ubiquitin-like superfamily protein -0.5 0.32 -0.32
43 AT3G14300 pectinesterase family protein A. THALIANA PECTIN METHYLESTERASE
26, ATPMEPCRC, PECTIN
METHYLESTERASE 26		 -0.5 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
44 C0115 Homoserine D,L-Homoserine Homoserine homoserine biosynthesis,
threonine biosynthesis from homoserine,
methionine biosynthesis II 		1 0.3 -0.32 C0115
45 C0165 MST_1688.6 - - - 0.88 0.48 -0.42
46 C0164 MST_1596.8 - - - 0.81 0.5 -0.45
47 C0160 MST_1509.5 - - - 0.74 0.47 -0.48
48 C0163 MST_1589.2 - - - 0.73 0.47 -0.48
49 C0055 Alanine D,L-Alanine D-Alanine; L-Alanine alanine degradation III,
beta-alanine biosynthesis II,
biotin biosynthesis II,
IAA biosynthesis II,
molybdenum cofactor biosynthesis II (eukaryotes),
phenylalanine degradation III,
alanine biosynthesis III,
IAA biosynthesis I,
alanine biosynthesis II,
tRNA charging,
molybdenum cofactor biosynthesis,
4-aminobutyrate degradation IV,
alanine degradation II (to D-lactate),
indole-3-acetyl-amino acid biosynthesis,
glutamate degradation IV 		0.67 0.33 -0.31 C0055
50 C0102 Glutamine D,L-Glutamine L-Glutamine ammonia assimilation cycle II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
tetrahydrofolate biosynthesis II,
NAD biosynthesis I (from aspartate),
nitrate reduction II (assimilatory),
5-aminoimidazole ribonucleotide biosynthesis I,
citrulline biosynthesis,
pyrimidine ribonucleotides interconversion,
histidine biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
pyridoxal 5'-phosphate biosynthesis II,
arginine biosynthesis I,
UDP-N-acetyl-D-glucosamine biosynthesis II,
pyridine nucleotide cycling (plants),
glutamate biosynthesis IV,
glutamine biosynthesis III,
glutamate biosynthesis V,
asparagine biosynthesis III (tRNA-dependent),
tryptophan biosynthesis,
L-glutamine biosynthesis II (tRNA-dependent),
uridine-5'-phosphate biosynthesis,
tRNA charging,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
asparagine biosynthesis I 		0.66 0.31 -0.33 C0102
51 C0161 MST_1566.3 - - - 0.65 0.45 -0.49
52 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - 0.65 0.46 -0.43 C0023
53 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		0.53 0.31 -0.31 C0231