C0226 : Raffinose pentahydrate
Query Information
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ID C0226
Compound name Raffinose pentahydrate
External link -
Pathway Information galactolipid biosynthesis suppression,
polysaccharide biosynthesis
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G23180 cytochrome P450, family 96, subfamily A, polypeptide 1 cytochrome P450, family 96,
subfamily A, polypeptide 1		 -0.79 0.33 -0.32
2 AT1G05805 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.78 0.31 -0.3
3 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 -0.75 0.34 -0.3
4 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.74 0.3 -0.32
5 AT1G53850 20S proteasome alpha subunit E1 ARABIDOPSIS 20S PROTEASOME ALPHA
SUBUNIT E1, 20S proteasome alpha
subunit E1		 0.73 0.33 -0.32
6 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.73 0.32 -0.35
7 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.72 0.32 -0.3
8 AT2G41420 proline-rich family protein WINDHOSE 2 0.72 0.32 -0.32
9 AT1G29240 Protein of unknown function (DUF688) -0.72 0.32 -0.33
10 AT3G25220 FK506-binding protein 15 kD-1 FK506-binding protein 15 kD-1 0.72 0.33 -0.31
11 AT4G24820 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 0.72 0.3 -0.31
12 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.71 0.32 -0.32
13 AT2G30990 Protein of unknown function (DUF688) 0.71 0.31 -0.31
14 AT4G38420 SKU5 similar 9 SKU5 similar 9 0.71 0.32 -0.32
15 AT1G50460 hexokinase-like 1 ATHKL1, hexokinase-like 1 0.7 0.32 -0.32
16 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.7 0.3 -0.29
17 AT5G13980 Glycosyl hydrolase family 38 protein -0.69 0.3 -0.32
18 AT5G56100 glycine-rich protein / oleosin -0.69 0.31 -0.3
19 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 0.69 0.32 -0.3
20 AT5G02480 HSP20-like chaperones superfamily protein -0.69 0.31 -0.33
21 AT4G00330 calmodulin-binding receptor-like cytoplasmic kinase 2 calmodulin-binding receptor-like
cytoplasmic kinase 2		 0.69 0.32 -0.31
22 AT5G54010 UDP-Glycosyltransferase superfamily protein -0.68 0.3 -0.31
23 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein		 0.68 0.31 -0.3
24 AT5G50210 quinolinate synthase ONSET OF LEAF DEATH 5, quinolinate
synthase, SULFUR E 3		 0.68 0.3 -0.32
25 AT1G56220 Dormancy/auxin associated family protein -0.68 0.3 -0.32
26 AT5G48500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.28 -0.33
27 AT5G03180 RING/U-box superfamily protein -0.67 0.33 -0.31
28 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.33 -0.3
29 AT3G14560 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.32 -0.32
30 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 -0.66 0.3 -0.31
31 AT1G62290 Saposin-like aspartyl protease family protein -0.66 0.31 -0.32
32 AT5G12390 Tetratricopeptide repeat (TPR)-like superfamily protein FISSION 1B 0.66 0.32 -0.3
33 AT1G53070 Legume lectin family protein -0.66 0.31 -0.32
34 AT2G23140 RING/U-box superfamily protein with ARM repeat domain 0.66 0.29 -0.34
35 AT4G35720 Arabidopsis protein of unknown function (DUF241) -0.66 0.32 -0.32
36 AT1G31710 Copper amine oxidase family protein 0.66 0.32 -0.32
37 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.31 -0.32
38 AT1G55170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast
hits to 8993 proteins in 828 species: Archae - 344;
Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants -
683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI
BLink).		 0.66 0.29 -0.29
39 AT5G18970 AWPM-19-like family protein 0.66 0.32 -0.32
40 AT5G27530 Pectin lyase-like superfamily protein -0.65 0.32 -0.31
41 AT3G06890 unknown protein; Has 91 Blast hits to 91 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.32 -0.31
42 AT2G39890 proline transporter 1 PROLINE TRANSPORTER 1, proline
transporter 1		 0.65 0.31 -0.31
43 AT2G19710 Regulator of Vps4 activity in the MVB pathway protein 0.65 0.32 -0.32
44 AT3G62090 phytochrome interacting factor 3-like 2 PHYTOCHROME-INTERACTING FACTOR 6,
phytochrome interacting factor
3-like 2		 -0.65 0.33 -0.31
45 AT1G30530 UDP-glucosyl transferase 78D1 UDP-glucosyl transferase 78D1 0.64 0.32 -0.34
46 AT1G24450 Ribonuclease III family protein NUCLEAR FUSION DEFECTIVE 2 -0.64 0.32 -0.32
47 AT4G19010 AMP-dependent synthetase and ligase family protein 0.63 0.31 -0.31
48 AT2G37540 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.34 -0.32
49 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.63 0.31 -0.3
50 AT4G28240 Wound-responsive family protein -0.63 0.34 -0.3
51 AT1G13580 LAG1 longevity assurance homolog 3 LAG1 longevity assurance homolog
3, LAG One Homologue 3		 0.63 0.34 -0.32
52 AT3G02880 Leucine-rich repeat protein kinase family protein 0.63 0.29 -0.31
53 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 -0.63 0.33 -0.3
54 AT2G26830 Protein kinase superfamily protein embryo defective 1187 0.63 0.31 -0.34
55 AT5G12230 MED19A; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 MED19A 0.62 0.3 -0.32
56 AT5G53710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.33 -0.31
57 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 0.62 0.3 -0.3
58 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.34 -0.3
59 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.3 -0.32
60 AT3G30310 transposable element gene -0.62 0.31 -0.35
61 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.61 0.31 -0.33
62 AT5G50340 ATP-dependent peptidases;nucleotide binding;serine-type
endopeptidases;DNA helicases;ATP binding;damaged DNA
binding;nucleoside-triphosphatases		 -0.61 0.33 -0.32
63 AT2G39370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits
to 178 proteins in 53 species: Archae - 0; Bacteria - 58;
Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 4		 -0.61 0.32 -0.33
64 AT2G06410 transposable element gene -0.61 0.33 -0.31
65 AT5G07450 cyclin p4;3 cyclin p4;3 -0.6 0.3 -0.31
66 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.6 0.31 -0.31
67 AT4G14840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits
to 1532 proteins in 283 species: Archae - 19; Bacteria -
179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5;
Other Eukaryotes - 545 (source: NCBI BLink).		 -0.59 0.32 -0.32
68 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.59 0.32 -0.31
69 AT1G79360 organic cation/carnitine transporter 2 organic cation/carnitine
transporter 2, ORGANIC CATION
TRANSPORTER 2, organic
cation/carnitine transporter 2		 -0.59 0.31 -0.33
70 AT5G05550 sequence-specific DNA binding transcription factors -0.59 0.33 -0.31
71 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.59 0.3 -0.31
72 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 -0.59 0.31 -0.31
73 AT1G62510 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.33 -0.32
74 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.31 -0.32
75 AT2G32120 heat-shock protein 70T-2 heat-shock protein 70T-2 -0.58 0.33 -0.3
76 AT5G22500 fatty acid reductase 1 fatty acid reductase 1 -0.58 0.32 -0.34
77 AT2G25420 transducin family protein / WD-40 repeat family protein -0.58 0.28 -0.31
78 AT5G61050 histone deacetylase-related / HD-related -0.57 0.33 -0.3
79 AT1G54740 Protein of unknown function (DUF3049) -0.57 0.34 -0.32
80 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.57 0.32 -0.31
81 AT5G57240 OSBP(oxysterol binding protein)-related protein 4C OSBP(oxysterol binding
protein)-related protein 4C		 -0.57 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		1 0.31 -0.31
83 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - 0.83 0.44 -0.45
84 C0182 MST_2996.4 - - - 0.81 0.48 -0.43
85 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - 0.77 0.48 -0.47
86 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - 0.76 0.45 -0.48
87 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.68 0.45 -0.46 C0239
88 C0132 Kaempferol-3-O-rutinoside - - - -0.67 0.45 -0.47