Muatnts or Experiments cyp707a1-1 cyp707a3-1
Treatment No treatment
Control WT
Parental line Col-0
Growth condition 1/2 MS liquid
Tissue Whole seedling
Mutant description Deficiency of abiscisic acid
Growth protocol After sterilization of seeds treated with hypochlorous acid (10%) for 10 min, seeds were kept in distilled water for 3 days under dark condition at 4 ˚C to enhance germination.Seedling were grown for 7 days in liquid half MS medium (0.8% agar, pH 5.7) with shaking at 110 rpm at 22 ˚C, 24 h continuous light condition.
Reference Okamoto, M., Kuwahara, A., Seo, M., Kushiro, T., Asami, T., Hirai, N., Kamiya, Y., Koshiba, T., and Nambara, E. (2006). CYP707A1 and CYP707A2, which encode abscisic acid 8 '-hydroxylases, are indispensable for proper control of seed dormancy and germination in Arabidopsis. Plant Physiology 141, 97-107.
Genes statistics
AGI code p-value Ex value cnt value Signal ratio Annotation Link
AT3G30720 0.0001 4.525 0.365 3.63 qua-quine starch
 tair
AT5G45340 0.0329 0.123 1.529 -3.63 cytochrome P450
 tair
AT5G44120 0.0086 0.224 0.026 3.1 RmlC-like cupins superfamily protein
 tair
AT4G12930 0.0152 0.064 0.009 2.91 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl
 tair
AT2G41690 0.0412 0.025 0.128 -2.35 heat shock transcription factor B3
 tair
AT4G09290 0.0437 0.129 0.026 2.28 transposable element gene
 tair
AT1G32570 0.0167 0.051 0.22 -2.12 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
 tair
AT5G63580 0.0134 0.041 0.155 -1.93 flavonol synthase 2
 tair
AT2G27940 0.0134 0.073 0.271 -1.88 RING/U-box superfamily protein
 tair
AT3G42190 0.0232 0.046 0.168 -1.87 transposable element gene
 tair
AT1G77910 0.0427 0.07 0.021 1.74 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
 tair
AT5G44440 0.0134 0.695 0.22 1.66 FAD-binding Berberine family protein
 tair
AT1G44060 0.0129 0.108 0.039 1.48 transposable element gene
 tair
AT1G34510 0.0339 0.602 0.217 1.47 Peroxidase superfamily protein
 tair
AT5G42600 0.0052 3.414 1.337 1.35 marneral synthase
 tair
AT4G25380 0.0124 0.068 0.175 -1.35 stress-associated protein 10
 tair
AT4G21200 0.0310 0.184 0.075 1.3 gibberellin 2-oxidase 8
 tair
AT1G52690 0.0089 0.46 0.191 1.27 Late embryogenesis abundant protein (LEA) family protein
 tair
ATMG01330 0.0329 0.203 0.087 1.22 hypothetical protein
 tair
AT2G19060 0.0212 0.259 0.114 1.19 SGNH hydrolase-type esterase superfamily protein
 tair
AT4G15750 0.0218 0.13 0.289 -1.15 Plant invertase/pectin methylesterase inhibitor superfamily
protein
AT4G12330 0.0147 0.372 0.172 1.12 cytochrome P450
AT2G10500 0.0236 0.088 0.041 1.11 transposable element gene
AT3G46340 0.0030 0.088 0.185 -1.08 Leucine-rich repeat protein kinase family protein
AT1G12480 0.0123 0.131 0.271 -1.05 C4-dicarboxylate transporter/malic acid transport protein
AT2G14560 0.0322 0.448 0.918 -1.03 Protein of unknown function (DUF567)
AT3G44440 0.0488 0.163 0.081 1.01 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
AT5G11130 0.0450 0.16 0.081 0.98 Exostosin family protein
AT1G30990 0.0017 0.308 0.157 0.98 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
AT1G73000 0.0288 0.073 0.142 -0.97 PYR1-like 3
AT1G80730 0.0147 0.15 0.078 0.94 zinc-finger protein 1
AT5G59530 0.0198 0.399 0.209 0.93 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
AT4G01190 0.0135 0.118 0.224 -0.92 phosphatidylinositol phosphate kinase 10
AT3G60570 0.0256 0.099 0.185 -0.91 expansin B5
AT1G05490 0.0355 0.221 0.118 0.9 chromatin remodeling 31
AT3G13020 0.0155 0.234 0.127 0.89 hAT transposon superfamily protein
AT5G02690 0.0489 0.124 0.227 -0.87 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
AT5G18450 0.0207 0.158 0.285 -0.85 Integrase-type DNA-binding superfamily protein
AT4G29580 0.0276 0.155 0.273 -0.82 Cytidine/deoxycytidylate deaminase family protein
AT2G30820 0.0124 0.233 0.413 -0.82 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
AT3G45480 0.0218 0.075 0.131 -0.8 RING/U-box protein with C6HC-type zinc finger
AT1G56540 0.0201 0.137 0.079 0.79 Disease resistance protein (TIR-NBS-LRR class) family
AT5G42580 0.0033 0.731 0.428 0.77 cytochrome P450
AT4G10270 0.0407 5.72 3.385 0.76 Wound-responsive family protein
AT5G44660 0.0084 0.383 0.642 -0.75 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).
AT1G02050 0.0440 0.209 0.349 -0.74 Chalcone and stilbene synthase family protein
AT3G58280 0.0252 0.1 0.168 -0.74 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain
AT4G14630 0.0437 0.25 0.416 -0.74 germin-like protein 9
AT1G19960 0.0025 0.59 0.986 -0.74 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).
AT2G05540 0.0317 0.597 0.997 -0.74 Glycine-rich protein family
AT3G47340 0.0409 0.166 0.272 -0.71 glutamine-dependent asparagine synthase 1
AT4G11770 0.0118 0.172 0.28 -0.71 Galactose oxidase/kelch repeat superfamily protein
AT3G22460 0.0312 0.237 0.387 -0.71 O-acetylserine (thiol) lyase (OAS-TL) isoform A2
AT5G43230 0.0185 0.217 0.133 0.7 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
AT3G62350 0.0411 0.154 0.096 0.69 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink).
AT5G44610 0.0047 0.762 0.471 0.69 microtubule-associated protein 18
AT3G10880 0.0032 0.187 0.301 -0.69 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G05180.1); Has 15699 Blast
hits to 11378 proteins in 1134 species: Archae - 391;
Bacteria - 2054; Metazoa - 6851; Fungi - 1354; Plants -
1096; Viruses - 119; Other Eukaryotes - 3834 (source: NCBI
BLink).
AT2G41610 0.0407 0.164 0.264 -0.69 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).
AT2G44110 0.0007 0.374 0.233 0.68 Seven transmembrane MLO family protein
AT4G30570 0.0473 0.29 0.463 -0.68 Glucose-1-phosphate adenylyltransferase family protein
AT3G16470 0.0012 10.63 17.067 -0.68 Mannose-binding lectin superfamily protein
AT1G31280 0.0382 0.794 0.495 0.68 Argonaute family protein
AT3G18350 0.0344 0.678 1.083 -0.67 Plant protein of unknown function (DUF639)
AT2G18010 0.0251 0.172 0.108 0.67 SAUR-like auxin-responsive protein family
AT1G34010 0.0034 1.155 1.823 -0.66 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits
to 74 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
AT2G20210 0.0498 0.363 0.23 0.66 RNI-like superfamily protein
AT5G36150 0.0346 0.259 0.163 0.66 putative pentacyclic triterpene synthase 3
AT5G25190 0.0105 1.393 0.881 0.66 Integrase-type DNA-binding superfamily protein
AT5G64060 0.0438 0.51 0.324 0.66 NAC domain containing protein 103
AT5G55050 0.0288 1.21 0.773 0.65 GDSL-like Lipase/Acylhydrolase superfamily protein
AT5G52070 0.0334 0.485 0.757 -0.64 Agenet domain-containing protein
AT5G38140 0.0192 0.396 0.615 -0.64 nuclear factor Y
AT5G38780 0.0410 0.365 0.569 -0.64 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
AT2G28980 0.0408 0.119 0.184 -0.64 transposable element gene
AT5G35940 0.0487 0.661 1.021 -0.63 Mannose-binding lectin superfamily protein
AT1G63650 0.0248 0.615 0.397 0.63 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
AT3G27110 0.0009 1.336 2.068 -0.63 Peptidase family M48 family protein
AT4G18230 0.0008 1.502 2.312 -0.62 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).
AT4G36470 0.0125 0.358 0.549 -0.62 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
AT4G03320 0.0109 1.14 0.743 0.62 translocon at the inner envelope membrane of chloroplasts
20-IV
AT4G26160 0.0244 0.396 0.606 -0.61 atypical CYS HIS rich thioredoxin 1
AT1G21160 0.0441 0.301 0.46 -0.61 eukaryotic translation initiation factor 2 (eIF-2) family
protein
AT4G23260 0.0198 0.512 0.782 -0.61 cysteine-rich RLK (RECEPTOR-like protein kinase) 18

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Metabolites statistics
CID p-value Ex value cnt value Signal ratio Annotation Link
C0126 0.0058 0.275 0.116 1.25 Isorhamnetin-dirhamnoside?
C0224 0.0104 0.785 0.373 1.08 Quercetin-3-O-[6''-O-(α-rhamnosyl)β-glucoside]-7-O-α-rhamnoside compound
C0086 0.0409 0.351 0.171 1.04 Disinapylspermidine
C0211 0.0398 2.110 4.299 -1.03 PR_MST_2158.8
C0127 0.0221 1.104 0.632 0.81 Isorhamnetin-hexosyl-rhamnoside?
C0034 0.0241 6.409 3.743 0.78 4-(Methylthio)butylglucosinolate compound