4.0:Information of module
Imbibed 24 h ABA 30uM (seed)
In comparison with WT cotyledons help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 4.155e-09
GO:0015979 photosynthesis BP 1.662e-08
GO:0019684 photosynthesis, light reaction BP 2.199e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051186 cofactor metabolic process BP 1.289e-05
GO:0006790 sulfur compound metabolic process BP 1.296e-04
GO:0015979 photosynthesis BP 1.719e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Imbibed 24 h ABA 30uM (seed)		 Log2 signal ratio
WT cotyledons
1 255049_at AT4G09610 GASA2, GAST1 protein homolog 2 0.640 -0.736
2 267313_at AT2G34740 [Protein phosphatase 2C family protein] 0.578 -1.094
3 247096_at AT5G66430 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.535 -0.984
4 249111_at AT5G43770 [proline-rich family protein] 0.531 -0.137
5 246925_at AT5G25180 CYP71B14, cytochrome P450, family 71, subfamily B, polypeptide 14 0.522 -1.531
6 256827_at AT3G18570 [Oleosin family protein] 0.484 0.140
7 244973_at ATCG00690 PSBT, photosystem II reaction center protein T, PSBTC 0.471 -1.087
8 257859_at AT3G12955 SAUR74, SMALL AUXIN UPREGULATED RNA 74 0.440 -1.008
9 248969_at AT5G45310 unknown 0.414 -0.655
10 250889_at AT5G04500 [glycosyltransferase family protein 47] 0.377 -0.268
11 255048_at AT4G09600 GASA3, GAST1 protein homolog 3 0.376 -0.931
12 266278_at AT2G29300 [NAD(P)-binding Rossmann-fold superfamily protein] 0.374 0.937
13 255761_at AT1G16770 unknown 0.374 -0.680
14 250010_at AT5G18450 [Integrase-type DNA-binding superfamily protein] 0.371 0.446
15 260797_at AT1G78390 ATNCED9, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9, NCED9, nine-cis-epoxycarotenoid dioxygenase 9 0.361 -0.386
16 250874_at AT5G04010 [F-box family protein] 0.338 -0.852
17 248096_at AT5G55240 ATPXG2, ARABIDOPSIS THALIANA PEROXYGENASE 2 0.314 -0.616
18 247128_at AT5G66110 HIPP27, heavy metal associated isoprenylated plant protein 27 0.304 -0.538
19 258240_at AT3G27660 OLE3, OLEOSIN 3, OLEO4, oleosin 4 0.287 0.600
20 254580_at AT4G19390 [Uncharacterised protein family (UPF0114)] 0.274 0.395
21 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.263 0.266
22 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.260 0.087
23 244996_at ATCG00160 RPS2, ribosomal protein S2 0.250 0.348
24 257309_at AT3G28150 AXY4L, ALTERED XYLOGLUCAN 4-LIKE, TBL22, TRICHOME BIREFRINGENCE-LIKE 22 0.239 -0.188
25 267075_at AT2G41070 ATBZIP12, DPBF4, EEL, ENHANCED EM LEVEL 0.237 -0.966
26 249937_at AT5G22470 [NAD+ ADP-ribosyltransferases] 0.234 -0.389
27 264888_at AT1G23070 unknown 0.230 -1.394
28 258209_at AT3G14060 unknown 0.224 -0.439
29 245006_at ATCG00340 PSAB 0.215 1.116
30 244937_at ATCG01110 NDHH, NAD(P)H dehydrogenase subunit H 0.209 -0.131
31 247269_at AT5G64210 AOX2, alternative oxidase 2 0.208 -0.546
32 253475_at AT4G32290 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] 0.208 -0.233
33 245089_at AT2G45290 TKL2, transketolase 2 0.205 0.189
34 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.201 -0.774
35 265255_at AT2G28420 GLYI8, glyoxylase I 8 0.196 -0.441
36 259167_at AT3G01570 [Oleosin family protein] 0.188 -0.893
37 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.283 0.350
38 259403_at AT1G17745 PGDH, 3-phosphoglycerate dehydrogenase, PGDH2, phosphoglycerate dehydrogenase 2 -0.231 0.808
39 258811_at AT3G03990 [alpha/beta-Hydrolases superfamily protein] -0.226 1.417
40 265547_at AT2G28305 ATLOG1, LOG1, LONELY GUY 1 -0.202 -0.044
41 259133_at AT3G05400 [Major facilitator superfamily protein] -0.202 0.099
42 254226_at AT4G23690 AtDIR6, Arabidopsis thaliana dirigent protein 6, DIR6, dirigent protein 6 -0.194 -0.293
43 245592_at AT4G14540 NF-YB3, nuclear factor Y, subunit B3 -0.193 0.930
44 259909_at AT1G60870 MEE9, maternal effect embryo arrest 9 -0.181 1.101
45 247266_at AT5G64570 ATBXL4, ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4, XYL4, beta-D-xylosidase 4 -0.178 0.456
46 250772_at AT5G05420 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.168 0.415
47 249524_at AT5G38520 [alpha/beta-Hydrolases superfamily protein] -0.167 1.056
48 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] -0.164 0.993
49 261336_at AT1G44790 [ChaC-like family protein] -0.163 0.294
50 248623_at AT5G49170 unknown -0.157 0.722
51 260444_at AT1G68300 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.156 0.167
52 248200_at AT5G54160 ATOMT1, O-methyltransferase 1, COMT1, caffeate O-methyltransferase 1, OMT1, O-methyltransferase 1 -0.155 0.369
53 262414_at AT1G49430 LACS2, long-chain acyl-CoA synthetase 2, LRD2, LATERAL ROOT DEVELOPMENT 2 -0.155 0.548
54 262377_at AT1G73110 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.154 0.782
55 263387_at AT2G40160 TBL30 -0.153 -0.717
56 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 -0.152 -0.047
57 257272_at AT3G28130 UMAMIT44, Usually multiple acids move in and out Transporters 44 -0.145 0.011
58 259460_at AT1G44000 unknown -0.142 0.886
59 248302_at AT5G53160 PYL8, PYR1-like 8, RCAR3, regulatory components of ABA receptor 3 -0.140 0.597
60 254798_at AT4G13050 [Acyl-ACP thioesterase] -0.139 -0.099
61 266559_at AT2G23920 unknown -0.139 -0.507
62 261649_at AT1G27700 [Syntaxin/t-SNARE family protein] -0.139 -0.290
63 249565_at AT5G38440 [Plant self-incompatibility protein S1 family] -0.138 -1.100
64 267154_at AT2G30870 ATGSTF10, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 10, ATGSTF4, ERD13, EARLY DEHYDRATION-INDUCED 13, GSTF10, glutathione S-transferase PHI 10 -0.136 1.484
65 258676_at AT3G08600 unknown -0.135 0.608
66 245213_at AT1G44575 CP22, NPQ4, NONPHOTOCHEMICAL QUENCHING 4, PSBS, PHOTOSYSTEM II SUBUNIT S -0.134 1.342
67 247961_at AT5G56570 [Leucine-rich repeat (LRR) family protein] -0.133 -0.702
68 249045_at AT5G44380 [FAD-binding Berberine family protein] -0.132 -0.421
69 253206_at AT4G34640 ERG9, SQS1, squalene synthase 1 -0.131 0.541
70 250511_at AT5G09960 unknown -0.125 0.483
71 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC -0.121 -0.315