4.0:Information of module
PNO8 3 h
In comparison with seedling 6h after Gamma atm-1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010583 response to cyclopentenone BP 1.354e-10
GO:0009407 toxin catabolic process BP 3.187e-10
GO:0090487 secondary metabolite catabolic process BP 3.187e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071554 cell wall organization or biogenesis BP 4.612e-04
GO:0030001 metal ion transport BP 8.858e-04
GO:0048469 cell maturation BP 1.010e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
PNO8 3 h 		Log2 signal ratio
seedling 6h after Gamma atm-1
1 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 0.996 0.205
2 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.911 0.073
3 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 0.845 0.269
4 265499_at AT2G15480 UGT73B5, UDP-glucosyl transferase 73B5 0.769 0.230
5 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] 0.660 0.042
6 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.600 0.117
7 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.553 0.397
8 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] 0.472 0.115
9 246273_at AT4G36700 [RmlC-like cupins superfamily protein] 0.464 -0.338
10 255543_at AT4G01870 [tolB protein-related] 0.463 0.178
11 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 0.445 0.103
12 250449_at AT5G10830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.355 0.108
13 259980_at AT1G76520 [Auxin efflux carrier family protein] 0.346 0.118
14 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 0.342 0.145
15 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 0.339 0.083
16 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.307 0.093
17 252427_at AT3G47640 PYE, POPEYE 0.306 0.220
18 250248_at AT5G13740 ZIF1, zinc induced facilitator 1 0.295 0.079
19 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.286 0.089
20 267288_at AT2G23680 [Cold acclimation protein WCOR413 family] 0.269 0.086
21 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.260 -0.202
22 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.251 0.240
23 254549_at AT4G19880 [Glutathione S-transferase family protein] 0.215 0.111
24 251942_at AT3G53480 ABCG37, ATP-binding cassette G37, ATPDR9, PLEIOTROPIC DRUG RESISTANCE 9, PDR9, pleiotropic drug resistance 9, PIS1, polar auxin transport inhibitor sensitive 1 0.214 0.072
25 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.207 -0.059
26 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.246 0.006
27 255702_at AT4G00230 XSP1, xylem serine peptidase 1 -0.231 -0.072
28 252296_at AT3G48970 [Heavy metal transport/detoxification superfamily protein ] -0.217 -0.009
29 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.202 0.151
30 261870_at AT1G11570 NTL, NTF2-like -0.180 0.000
31 264806_at AT1G08610 [Pentatricopeptide repeat (PPR) superfamily protein] -0.173 -0.344
32 247734_at AT5G59400 unknown -0.171 0.051
33 248454_at AT5G51350 MOL1, MORE LATERAL GROWTH1 -0.169 -0.010
34 256563_at AT3G29780 RALFL27, ralf-like 27 -0.166 0.024
35 257747_at AT3G18700 unknown -0.166 0.035
36 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.161 0.088
37 263612_at AT2G16440 MCM4, MINICHROMOSOME MAINTENANCE 4 -0.158 -0.040
38 253408_at AT4G32950 [Protein phosphatase 2C family protein] -0.156 -0.000
39 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.154 0.127
40 259720_at AT1G61080 [Hydroxyproline-rich glycoprotein family protein] -0.153 0.131
41 258907_at AT3G06370 ATNHX4, NHX4, sodium hydrogen exchanger 4 -0.151 -0.122
42 250099_at AT5G17300 RVE1, REVEILLE 1 -0.141 -0.176
43 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.138 0.107
44 267029_at AT2G38460 ATIREG1, ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 1, FPN1, FERROPORTIN 1, IREG1, iron regulated 1 -0.138 0.248
45 249969_at AT5G19090 [Heavy metal transport/detoxification superfamily protein ] -0.137 -0.021
46 260484_at AT1G68360 [C2H2 and C2HC zinc fingers superfamily protein] -0.130 -0.051
47 251268_at AT3G62350 unknown -0.126 -0.031
48 258689_at AT3G07940 [Calcium-dependent ARF-type GTPase activating protein family] -0.125 -0.005
49 252836_at AT3G42070 unknown -0.125 0.134