4.0:Information of module
Mutant bri1
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009416 response to light stimulus BP 7.958e-05
GO:0072524 pyridine-containing compound metabolic p... BP 8.231e-05
GO:0010304 PSII associated light-harvesting complex... BP 1.197e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006221 pyrimidine nucleotide biosynthetic proce... BP 3.042e-17
GO:0006220 pyrimidine nucleotide metabolic process BP 3.976e-17
GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 4.364e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant bri1		 Log2 signal ratio
Red/FR Light45min
1 253305_at AT4G33666 unknown 0.634 -0.003
2 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] 0.598 -0.020
3 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] 0.536 0.037
4 247880_at AT5G57780 P1R1, P1R1 0.491 -0.003
5 246122_at AT5G20380 PHT4;5, phosphate transporter 4;5 0.439 -0.006
6 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 0.434 0.037
7 262135_at AT1G78080 AtWIND1, RAP2.4, related to AP2 4, WIND1, wound induced dedifferentiation 1 0.363 0.029
8 249894_at AT5G22580 [Stress responsive A/B Barrel Domain] 0.356 0.003
9 261292_at AT1G36940 unknown 0.332 -0.007
10 249824_at AT5G23380 unknown 0.320 0.001
11 247882_at AT5G57785 unknown 0.271 0.014
12 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 0.219 -0.013
13 258456_at AT3G22420 ATWNK2, ARABIDOPSIS THALIANA WITH NO K 2, WNK2, with no lysine (K) kinase 2, ZIK3 0.214 -0.030
14 267010_at AT2G39250 SNZ, SCHNARCHZAPFEN 0.205 -0.014
15 254638_at AT4G18740 [Rho termination factor] 0.204 0.004
16 252184_at AT3G50660 AtDWF4, CLM, CLOMAZONE-RESISTANT, CYP90B1, CYTOCHROME P450 90B1, DWF4, DWARF 4, PSC1, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SAV1, SHADE AVOIDANCE 1, SNP2, SUPPRESSOR OF NPH4 2 0.200 -0.002
17 255637_at AT4G00750 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.198 -0.025
18 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 0.194 0.017
19 245523_at AT4G15910 ATDI21, drought-induced 21, DI21, drought-induced 21 0.186 0.020
20 251115_at AT5G01400 ESP4, ENHANCED SILENCING PHENOTYPE 4 0.184 0.005
21 258939_at AT3G10020 unknown 0.180 0.087
22 245304_at AT4G15630 [Uncharacterised protein family (UPF0497)] 0.177 -0.020
23 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.175 0.025
24 249164_at AT5G42820 ATU2AF35B, U2AF35B 0.169 0.001
25 264779_at AT1G08570 ACHT4, atypical CYS HIS rich thioredoxin 4 0.169 -0.012
26 246045_at AT5G19430 [RING/U-box superfamily protein] 0.166 0.022
27 262496_at AT1G21790 [TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein] 0.163 -0.043
28 257766_at AT3G23030 IAA2, indole-3-acetic acid inducible 2 0.163 -0.017
29 259166_at AT3G01670 AtSEOR2, Arabidopsis thaliana sieve element occlusion-related 2, SEOa, sieve element occlusion a, SEOR2, sieve element occlusion-related 2 0.161 0.017
30 256353_at AT1G55000 [peptidoglycan-binding LysM domain-containing protein] 0.160 0.013
31 260983_at AT1G53560 [Ribosomal protein L18ae family] 0.157 0.014
32 246236_at AT4G36470 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.157 -0.017
33 266793_at AT2G03060 AGL30, AGAMOUS-like 30 0.146 -0.016
34 258746_at AT3G05950 [RmlC-like cupins superfamily protein] 0.142 0.149
35 265592_at AT2G20110 [Tesmin/TSO1-like CXC domain-containing protein] 0.141 -0.008
36 250109_at AT5G15230 GASA4, GAST1 protein homolog 4 0.141 -0.004
37 258604_at AT3G02980 MCC1, MEIOTIC CONTROL OF CROSSOVERS1 0.138 0.025
38 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.138 0.028
39 254006_at AT4G26340 [F-box/RNI-like/FBD-like domains-containing protein] 0.136 -0.032
40 260495_at AT2G41810 unknown 0.132 -0.007
41 254175_at AT4G24050 [NAD(P)-binding Rossmann-fold superfamily protein] 0.131 -0.033
42 245733_at AT1G73380 unknown 0.129 -0.017
43 265495_at AT2G15695 unknown 0.129 0.024
44 267121_at AT2G23540 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.533 0.071
45 256497_at AT1G31580 CXC750, ECS1 -0.496 0.004
46 245181_at AT5G12420 [O-acyltransferase (WSD1-like) family protein] -0.476 -0.013
47 262657_at AT1G14210 [Ribonuclease T2 family protein] -0.431 0.008
48 266625_at AT2G35380 [Peroxidase superfamily protein] -0.417 0.041
49 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.417 -0.013
50 256811_at AT3G21340 [Leucine-rich repeat protein kinase family protein] -0.410 0.031
51 252888_at AT4G39210 APL3 -0.403 -0.036
52 247765_at AT5G58860 CYP86, CYP86A1, cytochrome P450, family 86, subfamily A, polypeptide 1, HORST, hydroxylase of root suberized tissue -0.382 -0.015
53 263544_at AT2G21590 APL4 -0.360 -0.003
54 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.347 -0.006
55 250500_at AT5G09530 PELPK1, Pro-Glu-Leu|Ile|Val-Pro-Lys 1, PRP10, proline-rich protein 10 -0.341 0.079
56 260234_at AT1G74460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.340 0.007
57 251531_at AT3G58550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.336 0.003
58 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.333 -0.004
59 245889_at AT5G09480 [hydroxyproline-rich glycoprotein family protein] -0.329 -0.002
60 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -0.311 0.006
61 256675_at AT3G52170 [DNA binding] -0.290 0.028
62 249061_at AT5G44550 [Uncharacterised protein family (UPF0497)] -0.289 0.035
63 266157_at AT2G28100 ATFUC1, alpha-L-fucosidase 1, FUC1, alpha-L-fucosidase 1 -0.282 -0.037
64 260824_at AT1G06720 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.281 -0.023
65 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 -0.280 -0.023
66 249955_at AT5G18840 [Major facilitator superfamily protein] -0.278 -0.001
67 262961_at AT1G54490 AIN1, ACC INSENSITIVE 1, ATXRN4, EXORIBONUCLEASE 4, EIN5, ETHYLENE INSENSITIVE 5, XRN4, exoribonuclease 4 -0.263 0.019
68 265326_at AT2G18220 [Noc2p family] -0.234 0.003
69 260035_at AT1G68850 [Peroxidase superfamily protein] -0.221 0.030
70 256460_at AT1G36240 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] -0.213 -0.041
71 258474_at AT3G02650 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.205 -0.024
72 262317_at AT2G48140 EDA4, embryo sac development arrest 4 -0.192 -0.006
73 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.189 0.017
74 253605_at AT4G30990 [ARM repeat superfamily protein] -0.186 -0.048
75 256978_at AT3G21110 ATPURC, PUR7, purin 7, PURC, PURIN C -0.186 0.013
76 252638_at AT3G44540 FAR4, fatty acid reductase 4 -0.181 0.036
77 267309_at AT2G19385 [zinc ion binding] -0.181 0.005
78 258965_at AT3G10530 [Transducin/WD40 repeat-like superfamily protein] -0.180 -0.033
79 264987_at AT1G27030 unknown -0.172 0.018
80 267013_at AT2G39180 ATCRR2, CCR2, CRINKLY4 related 2 -0.172 -0.061
81 247183_at AT5G65440 unknown -0.171 0.047
82 258589_at AT3G04290 ATLTL1, LTL1, Li-tolerant lipase 1 -0.170 -0.016
83 253566_at AT4G31210 [DNA topoisomerase, type IA, core] -0.169 -0.033
84 254202_at AT4G24140 [alpha/beta-Hydrolases superfamily protein] -0.168 0.029
85 263766_at AT2G21440 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.168 0.042