4.0:Information of module
0h ivd
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009838 abscission BP 9.038e-07
GO:0001101 response to acid chemical BP 5.075e-06
GO:0042221 response to chemical BP 3.612e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048441 petal development BP 5.872e-04
GO:0048465 corolla development BP 5.872e-04
GO:0006551 leucine metabolic process BP 4.694e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
0h ivd		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 AT5G27500 AT5G27500 unknown 6.678 no data
2 AT4G37990 AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 5.347 0.156
3 AT1G53480 AT1G53480 ATMRD1, ARABIDOPSIS MTO 1 RESPONDING DOWN 1, MRD1, MTO 1 RESPONDING DOWN 1 5.298 no data
4 AT5G59310 AT5G59310 LTP4, lipid transfer protein 4 4.832 0.093
5 AT3G60140 AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 4.396 -0.109
6 AT2G41260 AT2G41260 ATM17, M17 3.970 0.017
7 AT1G80160 AT1G80160 GLYI7, glyoxylase I 7 3.886 0.046
8 AT3G44300 AT3G44300 AtNIT2, nitrilase 2, NIT2, nitrilase 2 3.882 no data
9 AT3G59930 AT3G59930 unknown 3.696 no data
10 AT1G09500 AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 3.147 -0.017
11 AT5G62165 AT5G62165 AGL42, AGAMOUS-like 42, FYF, FOREVER YOUNG FLOWER 3.140 0.002
12 AT5G59320 AT5G59320 LTP3, lipid transfer protein 3 3.029 -0.055
13 AT3G30122 AT3G30122 [expressed protein] 3.013 no data
14 AT4G21680 AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 3.009 -0.146
15 AT5G24780 AT5G24780 ATVSP1, VSP1, vegetative storage protein 1 2.979 no data
16 AT5G35935 AT5G35935 [copia-like retrotransposon family, has a 2.0e-232 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -4.266 no data
17 AT3G02310 AT3G02310 AGL4, AGAMOUS-like 4, SEP2, SEPALLATA 2 -3.703 0.457
18 AT4G09430 AT4G09430 [Disease resistance protein (TIR-NBS-LRR class) family] -2.762 -0.096
19 AT3G04717 AT3G04717 [pseudogene] -2.617 no data
20 AT1G20390 AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -2.262 -0.058
21 AT3G45300 AT3G45300 ATIVD, IVD, isovaleryl-CoA-dehydrogenase, IVDH, ISOVALERYL-COA-DEHYDROGENASE -2.237 0.206
22 AT5G22570 AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 -2.135 0.033
23 AT2G01020 AT2G01020 [5.8SrRNA] -2.008 no data
24 AT5G10140 AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 -1.928 0.123
25 AT2G06560 AT2G06560 [non-LTR retrotransposon family (LINE), has a 2.8e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] -1.880 no data
26 AT4G14690 AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 -1.879 -0.104
27 AT5G53320 AT5G53320 [Leucine-rich repeat protein kinase family protein] -1.878 0.118
28 AT2G42480 AT2G42480 [TRAF-like family protein] -1.829 0.055
29 AT4G04540 AT4G04540 CRK39, cysteine-rich RLK (RECEPTOR-like protein kinase) 39 -1.711 no data