4.0:Information of module
RGA-GR-DEX
In comparison with Wounding Stress3 h (shoot) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 1.649e-05
GO:0009611 response to wounding BP 2.457e-05
GO:0009719 response to endogenous stimulus BP 7.998e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010374 stomatal complex development BP 6.626e-05
GO:0016143 S-glycoside metabolic process BP 1.605e-04
GO:0019757 glycosinolate metabolic process BP 1.605e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
RGA-GR-DEX		 Log2 signal ratio
Wounding Stress3 h (shoot)
1 264415_at AT1G43160 RAP2.6, related to AP2 6 0.425 1.585
2 249459_at AT5G39580 [Peroxidase superfamily protein] 0.367 0.217
3 255733_at AT1G25400 unknown 0.346 0.188
4 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.277 0.252
5 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.261 0.194
6 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 0.230 -0.179
7 255057_at AT4G09840 unknown 0.225 0.050
8 267220_at AT2G02500 ATMEPCT, ISPD, MCT, 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE 0.221 -0.059
9 250223_at AT5G14070 ROXY2 0.207 0.032
10 247490_at AT5G61850 LFY, LEAFY, LFY3, LEAFY 3 0.192 0.014
11 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.167 -0.103
12 262801_at AT1G21010 unknown 0.150 0.368
13 245731_at AT1G73500 ATMKK9, MKK9, MAP kinase kinase 9 0.147 0.398
14 247299_at AT5G63900 [Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain] 0.141 -0.015
15 250790_at AT5G05640 [nucleoprotein-related] 0.137 0.058
16 245098_at AT2G40940 ERS, ETHYLENE RESPONSE SENSOR, ERS1, ethylene response sensor 1 0.134 0.008
17 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 0.123 0.028
18 252591_at AT3G45600 TET3, tetraspanin3 -0.358 -0.249
19 247447_at AT5G62730 [Major facilitator superfamily protein] -0.350 0.010
20 250936_at AT5G03120 unknown -0.312 0.087
21 266841_at AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 -0.296 0.247
22 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.289 -0.295
23 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.261 -0.348
24 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.258 -0.196
25 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.252 -0.379
26 254762_at AT4G13230 [Late embryogenesis abundant protein (LEA) family protein] -0.234 -0.002
27 248924_at AT5G45960 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.221 -0.077
28 263238_at AT2G16580 SAUR8, SMALL AUXIN UPREGULATED RNA 8 -0.219 -0.026
29 251293_at AT3G61930 unknown -0.213 0.043
30 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.201 -0.037
31 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.194 -0.263
32 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 -0.194 0.016
33 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 -0.178 -0.082