4.0:Information of module
flu dark 8hours/30 minute light
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 4.809e-37
GO:0010243 response to organonitrogen compound BP 4.323e-36
GO:1901700 response to oxygen-containing compound BP 5.735e-32
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044711 single-organism biosynthetic process BP 9.920e-12
GO:0016144 S-glycoside biosynthetic process BP 9.016e-11
GO:0019758 glycosinolate biosynthetic process BP 9.016e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
flu dark 8hours/30 minute light		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.820 -0.248
2 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.804 0.053
3 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.798 0.067
4 258653_at AT3G09870 SAUR48, SMALL AUXIN UPREGULATED RNA 48 0.780 0.060
5 256442_at AT3G10930 unknown 0.756 -0.041
6 266800_at AT2G22880 [VQ motif-containing protein] 0.706 0.014
7 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.704 0.134
8 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.684 0.253
9 263182_at AT1G05575 unknown 0.678 -0.034
10 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.677 0.063
11 247047_at AT5G66650 unknown 0.642 -0.073
12 245755_at AT1G35210 unknown 0.635 -0.150
13 261476_at AT1G14480 [Ankyrin repeat family protein] 0.624 0.005
14 246584_at AT5G14730 unknown 0.607 -0.078
15 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.561 0.073
16 253044_at AT4G37290 unknown 0.537 0.070
17 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.534 -0.319
18 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.534 0.045
19 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.519 -0.018
20 247543_at AT5G61600 ERF104, ethylene response factor 104 0.516 -0.024
21 253643_at AT4G29780 unknown 0.483 -0.073
22 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.483 0.173
23 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.482 -0.222
24 248726_at AT5G47960 ATRABA4C, RAB GTPase homolog A4C, RABA4C, RAB GTPase homolog A4C, SMG1, SMALL MOLECULAR WEIGHT G-PROTEIN 1 0.477 -0.024
25 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.473 -0.031
26 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.470 -0.093
27 259979_at AT1G76600 unknown 0.443 0.007
28 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.424 0.392
29 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.402 0.005
30 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.390 0.119
31 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.377 -0.119
32 267623_at AT2G39650 unknown 0.373 -0.018
33 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.370 0.073
34 252193_at AT3G50060 MYB77, myb domain protein 77 0.352 -0.088
35 260037_at AT1G68840 AtRAV2, EDF2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RAP2.8, RELATED TO AP2 8, RAV2, related to ABI3/VP1 2, TEM2, TEMPRANILLO 2 0.350 0.117
36 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.350 -0.024
37 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.348 -0.005
38 247351_at AT5G63790 ANAC102, NAC domain containing protein 102, NAC102, NAC domain containing protein 102 0.326 0.069
39 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 0.317 -0.166
40 248392_at AT5G52050 [MATE efflux family protein] 0.315 -0.036
41 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.315 -0.156
42 248870_at AT5G46710 [PLATZ transcription factor family protein] 0.313 -0.196
43 247753_at AT5G59070 [UDP-Glycosyltransferase superfamily protein] 0.311 -0.060
44 245731_at AT1G73500 ATMKK9, MKK9, MAP kinase kinase 9 0.310 0.353
45 252474_at AT3G46620 unknown 0.299 0.048
46 265184_at AT1G23710 unknown 0.294 -0.059
47 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 0.292 -0.013
48 263800_at AT2G24600 [Ankyrin repeat family protein] 0.290 0.043
49 254231_at AT4G23810 ATWRKY53, WRKY53 0.287 0.017
50 253332_at AT4G33420 [Peroxidase superfamily protein] 0.280 -0.058
51 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.277 -0.060
52 260477_at AT1G11050 [Protein kinase superfamily protein] 0.275 0.002
53 258682_at AT3G08720 ATPK19, Arabidopsis thaliana protein kinase 19, ATPK2, ARABIDOPSIS THALIANA PROTEIN KINASE 2, ATS6K2, ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2, S6K2, serine/threonine protein kinase 2 0.271 -0.057
54 262384_at AT1G72950 [Disease resistance protein (TIR-NBS class)] 0.270 0.082
55 255733_at AT1G25400 unknown 0.270 -0.266
56 263379_at AT2G40140 ATSZF2, CZF1, SZF2, (SALT-INDUCIBLE ZINC FINGER 2, ZFAR1 0.267 0.141
57 265441_at AT2G20870 [cell wall protein precursor, putative] 0.267 -0.039
58 258027_at AT3G19515 unknown -0.869 -0.037
59 258424_at AT3G16750 unknown -0.693 -0.315
60 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 -0.659 0.002
61 258113_at AT3G14650 CYP72A11, cytochrome P450, family 72, subfamily A, polypeptide 11 -0.657 0.080
62 257067_at AT3G18270 pseudogene -0.356 -0.018
63 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 -0.307 -0.049
64 249850_at AT5G23240 DJC76, DNA J protein C76 -0.237 0.076
65 258050_at AT3G16200 unknown -0.230 0.056
66 258633_at AT3G07990 SCPL27, serine carboxypeptidase-like 27 -0.221 -0.026
67 251058_at AT5G01790 unknown -0.219 0.027
68 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.218 -0.062
69 263829_at AT2G40435 unknown -0.217 -0.167
70 256249_at AT3G11270 MEE34, maternal effect embryo arrest 34 -0.209 0.340
71 245627_at AT1G56600 AtGolS2, galactinol synthase 2, GolS2, galactinol synthase 2 -0.206 -0.088
72 248918_at AT5G45890 AtSAG12, SAG12, senescence-associated gene 12 -0.205 0.219
73 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 -0.203 -0.015
74 246159_at AT5G20935 CRR42, CHLORORESPIRATORY REDUCTION 42 -0.190 -0.081
75 263580_at AT2G17140 [Pentatricopeptide repeat (PPR) superfamily protein] -0.189 -0.181
76 247064_at AT5G66890 [Leucine-rich repeat (LRR) family protein] -0.184 -0.232
77 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.180 0.056
78 259102_at AT3G11660 NHL1, NDR1/HIN1-like 1 -0.178 -0.207
79 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.177 -0.111
80 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -0.168 -0.133
81 257729_at AT3G18520 ATHDA15, HDA15, histone deacetylase 15 -0.167 -0.029
82 256969_at AT3G21080 [ABC transporter-related] -0.163 0.183
83 255773_at AT1G18590 ATSOT17, SULFOTRANSFERASE 17, ATST5C, ARABIDOPSIS SULFOTRANSFERASE 5C, SOT17, sulfotransferase 17 -0.158 -0.039
84 249166_at AT5G42840 [Cysteine/Histidine-rich C1 domain family protein] -0.153 0.032
85 262156_at AT1G52680 [late embryogenesis abundant protein-related / LEA protein-related] -0.152 -0.041
86 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.151 0.169
87 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 -0.149 -0.118
88 257730_at AT3G18420 [Protein prenylyltransferase superfamily protein] -0.148 -0.210
89 261913_at AT1G65860 FMO GS-OX1, flavin-monooxygenase glucosinolate S-oxygenase 1 -0.147 0.048
90 250425_at AT5G10530 LecRK-IX.1, L-type lectin receptor kinase IX.1 -0.147 -0.038
91 246797_at AT5G26790 unknown -0.145 0.022
92 256568_at AT3G19520 unknown -0.143 0.073
93 257271_at AT3G28007 AtSWEET4, SWEET4 -0.142 -0.027
94 264880_at AT1G61210 DWA3, DWD hypersensitive to ABA 3 -0.140 0.072
95 256673_at AT3G52370 FLA15, FASCICLIN-like arabinogalactan protein 15 precursor -0.136 -0.193
96 249788_at AT5G24330 ATXR6, ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6, SDG34, SET DOMAIN PROTEIN 34 -0.133 0.059
97 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.131 -0.010
98 253165_at AT4G35320 unknown -0.131 -0.167
99 257108_x_at AT3G30490 unknown -0.131 -0.093
100 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.130 -0.505
101 259387_at AT1G13370 [Histone superfamily protein] -0.129 0.110
102 253021_at AT4G38050 [Xanthine/uracil permease family protein] -0.128 0.133
103 248605_at AT5G49410 unknown -0.128 0.124
104 245897_at AT5G09400 KUP7, K+ uptake permease 7 -0.127 0.397
105 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.125 0.072
106 255896_at AT1G17800 AtENODL22, ENODL22, early nodulin-like protein 22 -0.123 0.245
107 258396_at AT3G15460 [Ribosomal RNA processing Brix domain protein] -0.122 -0.085
108 261380_at AT1G05400 unknown -0.121 -0.049
109 262137_at AT1G77920 TGA7, TGACG sequence-specific binding protein 7 -0.119 -0.240
110 246516_at AT5G15740 [O-fucosyltransferase family protein] -0.119 -0.213
111 257262_at AT3G21890 BBX31, B-box domain protein 31 -0.119 -0.015
112 249151_at AT5G43360 ATPT4, PHT1;3, phosphate transporter 1;3, PHT3, PHOSPHATE TRANSPORTER 3 -0.117 0.058
113 259655_at AT1G55210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.116 0.064
114 254737_at AT4G13840 CER26, ECERIFERUM 26 -0.116 0.140